Result of FASTA (omim) for
pF1KE1686
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1686, 198 aa
1>>>pF1KE1686 198 - 198 aa - 198 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9918+/-0.000307; mu= 15.0541+/- 0.019
mean_var=60.4381+/-12.236, 0's: 0 Z-trim(116.5): 21 B-trim: 244 in 1/49
Lambda= 0.164975
statistics sampled from 27621 (27642) to 27621 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.715), E-opt: 0.2 (0.324), width: 16
Scan time: 6.040
The best scores are: opt bits E(85289)
NP_005555 (OMIM: 600181) neutrophil gelatinase-ass ( 198) 1337 326.1 2.3e-89
NP_848631 (OMIM: 612905) epididymal-specific lipoc ( 192) 373 96.6 2.7e-20
XP_016870120 (OMIM: 612905) PREDICTED: epididymal- ( 227) 373 96.7 3.1e-20
XP_006717128 (OMIM: 612905) PREDICTED: epididymal- ( 355) 373 96.8 4.4e-20
XP_011516864 (OMIM: 612905) PREDICTED: epididymal- ( 355) 373 96.8 4.4e-20
XP_011516862 (OMIM: 612905) PREDICTED: epididymal- ( 382) 373 96.8 4.7e-20
XP_011516863 (OMIM: 612905) PREDICTED: epididymal- ( 383) 373 96.8 4.7e-20
NP_000945 (OMIM: 176803) prostaglandin-H2 D-isomer ( 190) 323 84.7 1e-16
XP_016870121 (OMIM: 612905) PREDICTED: epididymal- ( 184) 262 70.2 2.3e-12
NP_001624 (OMIM: 176870) protein AMBP preproprotei ( 352) 210 58.0 2.1e-08
NP_000597 (OMIM: 120930) complement component C8 g ( 202) 146 42.6 0.00051
>>NP_005555 (OMIM: 600181) neutrophil gelatinase-associa (198 aa)
initn: 1337 init1: 1337 opt: 1337 Z-score: 1725.3 bits: 326.1 E(85289): 2.3e-89
Smith-Waterman score: 1337; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)
10 20 30 40 50 60
pF1KE1 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 ILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNIKSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNIKSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLG
130 140 150 160 170 180
190
pF1KE1 LPENHIVFPVPIDQCIDG
::::::::::::::::::
NP_005 LPENHIVFPVPIDQCIDG
190
>>NP_848631 (OMIM: 612905) epididymal-specific lipocalin (192 aa)
initn: 440 init1: 251 opt: 373 Z-score: 485.5 bits: 96.6 E(85289): 2.7e-20
Smith-Waterman score: 397; 35.3% identity (66.8% similar) in 184 aa overlap (6-189:7-180)
10 20 30 40 50
pF1KE1 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGN
::: :.:: .:.:: : .: :: :.: .:: :::::.:.:.:::::
NP_848 MRLLCGLWLWLSLLKVLQAQ----TPTPLPLPP----PMQ-SFQGNQFQGEWFVLGLAGN
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 AILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNIKS
.. : . . ... .::..: ..: ... : ..:: : ...:. :::.::. .
NP_848 SFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPGQFTVDH-GV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 YPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSL
:: .:::...:.: :... .. .. ..:.: ::. : ..:: ....
NP_848 EPGADREETRVVDSDYTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTLDQFICLGRAQ
120 130 140 150 160 170
180 190
pF1KE1 GLPENHIVFPVPIDQCIDG
:: ...::::
NP_848 GLSDDNIVFPDVTGWSPQASVC
180 190
>>XP_016870120 (OMIM: 612905) PREDICTED: epididymal-spec (227 aa)
initn: 440 init1: 251 opt: 373 Z-score: 484.4 bits: 96.7 E(85289): 3.1e-20
Smith-Waterman score: 397; 35.3% identity (66.8% similar) in 184 aa overlap (6-189:35-208)
10 20 30
pF1KE1 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSK
::: :.:: .:.:: : .: ::
XP_016 RWVSGSPAHGHFLLSVPVGPAAARMRLLCGLWLWLSLLKVLQAQ----TPTPLPLPP---
10 20 30 40 50
40 50 60 70 80 90
pF1KE1 VPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKK
:.: .:: :::::.:.:.:::::.. : . . ... .::..: ..: ... : ..
XP_016 -PMQ-SFQGNQFQGEWFVLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQH
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE1 CDYWIRTFVPGCQPGEFTLGNIKSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKI
:: : ...:. :::.::. . :: .:::...:.: :... .. .. ..:
XP_016 CDTWSYVLIPAAQPGQFTVDH-GVEPGADREETRVVDSDYTQFALMLSRRHTSRLAVLRI
120 130 140 150 160 170
160 170 180 190
pF1KE1 TLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCIDG
.: ::. : ..:: .... :: ...::::
XP_016 SLLGRSWLLPPGTLDQFICLGRAQGLSDDNIVFPDVTGGALDLSSLPWVAAPA
180 190 200 210 220
>>XP_006717128 (OMIM: 612905) PREDICTED: epididymal-spec (355 aa)
initn: 440 init1: 251 opt: 373 Z-score: 481.5 bits: 96.8 E(85289): 4.4e-20
Smith-Waterman score: 397; 35.3% identity (66.8% similar) in 184 aa overlap (6-189:7-180)
10 20 30 40 50
pF1KE1 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGN
::: :.:: .:.:: : .: :: :.: .:: :::::.:.:.:::::
XP_006 MRLLCGLWLWLSLLKVLQAQ----TPTPLPLPP----PMQ-SFQGNQFQGEWFVLGLAGN
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 AILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNIKS
.. : . . ... .::..: ..: ... : ..:: : ...:. :::.::. .
XP_006 SFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPGQFTVDH-GV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 YPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSL
:: .:::...:.: :... .. .. ..:.: ::. : ..:: ....
XP_006 EPGADREETRVVDSDYTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTLDQFICLGRAQ
120 130 140 150 160 170
180 190
pF1KE1 GLPENHIVFPVPIDQCIDG
:: ...::::
XP_006 GLSDDNIVFPDVTGNMVHLQACWAVGTGPAGMSLVDPRGAGPSVYPGSSAPACAQGSPGS
180 190 200 210 220 230
>>XP_011516864 (OMIM: 612905) PREDICTED: epididymal-spec (355 aa)
initn: 440 init1: 251 opt: 373 Z-score: 481.5 bits: 96.8 E(85289): 4.4e-20
Smith-Waterman score: 397; 35.3% identity (66.8% similar) in 184 aa overlap (6-189:7-180)
10 20 30 40 50
pF1KE1 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGN
::: :.:: .:.:: : .: :: :.: .:: :::::.:.:.:::::
XP_011 MRLLCGLWLWLSLLKVLQAQ----TPTPLPLPP----PMQ-SFQGNQFQGEWFVLGLAGN
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 AILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNIKS
.. : . . ... .::..: ..: ... : ..:: : ...:. :::.::. .
XP_011 SFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPGQFTVDH-GV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 YPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSL
:: .:::...:.: :... .. .. ..:.: ::. : ..:: ....
XP_011 EPGADREETRVVDSDYTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTLDQFICLGRAQ
120 130 140 150 160 170
180 190
pF1KE1 GLPENHIVFPVPIDQCIDG
:: ...::::
XP_011 GLSDDNIVFPDVTGNMVHLQACWAVGTGPAGMSLVDPRGAGPSVYPGSSAPACAQGSPGS
180 190 200 210 220 230
>>XP_011516862 (OMIM: 612905) PREDICTED: epididymal-spec (382 aa)
initn: 440 init1: 251 opt: 373 Z-score: 481.0 bits: 96.8 E(85289): 4.7e-20
Smith-Waterman score: 397; 35.3% identity (66.8% similar) in 184 aa overlap (6-189:34-207)
10 20 30
pF1KE1 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSK
::: :.:: .:.:: : .: ::
XP_011 RGGRWTWGPLLPHLAGTQETAAARMRLLCGLWLWLSLLKVLQAQ----TPTPLPLPP---
10 20 30 40 50
40 50 60 70 80 90
pF1KE1 VPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKK
:.: .:: :::::.:.:.:::::.. : . . ... .::..: ..: ... : ..
XP_011 -PMQ-SFQGNQFQGEWFVLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQH
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE1 CDYWIRTFVPGCQPGEFTLGNIKSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKI
:: : ...:. :::.::. . :: .:::...:.: :... .. .. ..:
XP_011 CDTWSYVLIPAAQPGQFTVDH-GVEPGADREETRVVDSDYTQFALMLSRRHTSRLAVLRI
120 130 140 150 160 170
160 170 180 190
pF1KE1 TLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCIDG
.: ::. : ..:: .... :: ...::::
XP_011 SLLGRSWLLPPGTLDQFICLGRAQGLSDDNIVFPDVTGNMVHLQACWAVGTGPAGMSLVD
180 190 200 210 220 230
XP_011 PRGAGPSVYPGSSAPACAQGSPGSWVPVLNPGSEPPPAAPGPLSWATSSHPGSPVPGHLL
240 250 260 270 280 290
>>XP_011516863 (OMIM: 612905) PREDICTED: epididymal-spec (383 aa)
initn: 440 init1: 251 opt: 373 Z-score: 481.0 bits: 96.8 E(85289): 4.7e-20
Smith-Waterman score: 397; 35.3% identity (66.8% similar) in 184 aa overlap (6-189:35-208)
10 20 30
pF1KE1 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSK
::: :.:: .:.:: : .: ::
XP_011 RWVSGSPAHGHFLLSVPVGPAAARMRLLCGLWLWLSLLKVLQAQ----TPTPLPLPP---
10 20 30 40 50
40 50 60 70 80 90
pF1KE1 VPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKK
:.: .:: :::::.:.:.:::::.. : . . ... .::..: ..: ... : ..
XP_011 -PMQ-SFQGNQFQGEWFVLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQH
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE1 CDYWIRTFVPGCQPGEFTLGNIKSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKI
:: : ...:. :::.::. . :: .:::...:.: :... .. .. ..:
XP_011 CDTWSYVLIPAAQPGQFTVDH-GVEPGADREETRVVDSDYTQFALMLSRRHTSRLAVLRI
120 130 140 150 160 170
160 170 180 190
pF1KE1 TLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCIDG
.: ::. : ..:: .... :: ...::::
XP_011 SLLGRSWLLPPGTLDQFICLGRAQGLSDDNIVFPDVTGNMVHLQACWAVGTGPAGMSLVD
180 190 200 210 220 230
XP_011 PRGAGPSVYPGSSAPACAQGSPGSWVPVLNPGSEPPPAAPGPLSWATSSHPGSPVPGHLL
240 250 260 270 280 290
>>NP_000945 (OMIM: 176803) prostaglandin-H2 D-isomerase (190 aa)
initn: 281 init1: 99 opt: 323 Z-score: 421.2 bits: 84.7 E(85289): 1e-16
Smith-Waterman score: 360; 35.8% identity (62.7% similar) in 193 aa overlap (6-196:7-187)
10 20 30 40 50
pF1KE1 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGN
::.::::::.: .:: : : ..: .: :::...: :.:. .:::.:
NP_000 MATHHTLWMGLALLGVL--------GDL-QAAPEAQVSVQPNFQQDKFLGRWFSAGLASN
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 AI-LREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNIK
. ::: : .: .. : . :.::...::..:. . :. . : .. .
NP_000 SSWLREKKAALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSY---R
60 70 80 90 100
120 130 140 150 160 170
pF1KE1 SYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKI-TLYGRTKELTSELKENFIRFSK
: ..: : :: :.:.:.:... . . : :.. :::.::. .::::.: : :
NP_000 SPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCK
110 120 130 140 150 160
180 190
pF1KE1 SLGLPENHIVFPVPIDQCIDG
. :. :. ::: :.:.
NP_000 AQGFTEDTIVFLPQTDKCMTEQ
170 180 190
>>XP_016870121 (OMIM: 612905) PREDICTED: epididymal-spec (184 aa)
initn: 324 init1: 251 opt: 262 Z-score: 342.9 bits: 70.2 E(85289): 2.3e-12
Smith-Waterman score: 286; 38.0% identity (66.9% similar) in 121 aa overlap (6-125:35-146)
10 20 30
pF1KE1 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSK
::: :.:: .:.:: : .: ::
XP_016 RWVSGSPAHGHFLLSVPVGPAAARMRLLCGLWLWLSLLKVLQAQ----TPTPLPLPP---
10 20 30 40 50
40 50 60 70 80 90
pF1KE1 VPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKK
:.: .:: :::::.:.:.:::::.. : . . ... .::..: ..: ... : ..
XP_016 -PMQ-SFQGNQFQGEWFVLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQH
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE1 CDYWIRTFVPGCQPGEFTLGN-IKSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFK
:: : ...:. :::.::. . . . : :
XP_016 CDTWSYVLIPAAQPGQFTVDHGVDTRAGWPSSGSACWAGAGCCLPGRWTSSSAWAELRAS
120 130 140 150 160 170
160 170 180 190
pF1KE1 ITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCIDG
XP_016 RMTTSSSQM
180
>>NP_001624 (OMIM: 176870) protein AMBP preproprotein [H (352 aa)
initn: 117 init1: 73 opt: 210 Z-score: 271.9 bits: 58.0 E(85289): 2.1e-08
Smith-Waterman score: 210; 28.2% identity (56.4% similar) in 195 aa overlap (8-198:4-191)
10 20 30 40 50 60
pF1KE1 MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNA
:: ::: : : :.. .:.:: ... .:.::. ... :::: ... :..
NP_001 MRSLG-ALLLLLSACLAVSAGP-VPTPP-DNIQVQENFNISRIYGKWYNLAI-GST
10 20 30 40 50
70 80 90 100 110
pF1KE1 ILREDKDPQKMYATIYELKEDKS---YNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNI
: ..: .. : : . ..::. .:: :. .. :.: .
NP_001 CPWLKKIMDRMTVSTLVLGEGATEAEISMTSTRWRKGVCEETSGAYEKTDTDGKFLYHKS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 KSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNR-EYFKITLYGRTKELTSELKENFIRFS
: . :: :: :::...:. . :: :... . ::::. .: : ..: .
NP_001 KWNITMESY---VVHTNYDEYAIFLTKKFSRHHGPTITAKLYGRAPQLRETLLQDFRVVA
120 130 140 150 160
180 190
pF1KE1 KSLGLPENHIVFPVPIDQCIDG
...:.::. : . .:. :
NP_001 QGVGIPEDSIFTMADRGECVPGEQEPEPILIPRVRRAVLPQEEEGSGGGQLVTEVTKKED
170 180 190 200 210 220
198 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 09:55:43 2016 done: Sun Nov 6 09:55:44 2016
Total Scan time: 6.040 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]