Result of FASTA (omim) for
pF1KE1779
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1779, 288 aa
1>>>pF1KE1779 288 - 288 aa - 288 aa
Library: /omim/omim.rfq.tfa
64369986 residues in 92320 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8898+/-0.000417; mu= 12.6359+/- 0.025
mean_var=143.9284+/-29.498, 0's: 0 Z-trim(114.3): 108 B-trim: 592 in 1/56
Lambda= 0.106906
statistics sampled from 24912 (25071) to 24912 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.272), width: 16
Scan time: 4.180
The best scores are: opt bits E(92320)
NP_005182 (OMIM: 112203) T-lymphocyte activation a ( 288) 1950 312.7 5.6e-85
NP_008820 (OMIM: 601020) T-lymphocyte activation a ( 323) 277 54.7 2.8e-07
NP_787058 (OMIM: 601020) T-lymphocyte activation a ( 329) 276 54.6 3.2e-07
NP_795711 (OMIM: 601020) T-lymphocyte activation a ( 275) 247 50.0 6.4e-06
NP_001193854 (OMIM: 601020) T-lymphocyte activatio ( 247) 226 46.7 5.6e-05
NP_079516 (OMIM: 605715) CD276 antigen isoform b p ( 316) 215 45.2 0.00021
NP_001316557 (OMIM: 605715) CD276 antigen isoform ( 316) 215 45.2 0.00021
XP_016866546 (OMIM: 606000,612387) butyrophilin-li ( 482) 208 44.3 0.00059
NP_001291490 (OMIM: 606000,612387) butyrophilin-li ( 482) 208 44.3 0.00059
NP_001723 (OMIM: 601610) butyrophilin subfamily 1 ( 526) 197 42.7 0.002
XP_005254757 (OMIM: 605715) CD276 antigen isoform ( 534) 197 42.7 0.002
NP_001019907 (OMIM: 605715) CD276 antigen isoform ( 534) 197 42.7 0.002
XP_016878127 (OMIM: 605715) CD276 antigen isoform ( 534) 197 42.7 0.002
XP_011520397 (OMIM: 605715) CD276 antigen isoform ( 534) 197 42.7 0.002
NP_054862 (OMIM: 605402) programmed cell death 1 l ( 290) 190 41.3 0.0029
NP_001352688 (OMIM: 605717) ICOS ligand isoform e ( 275) 188 40.9 0.0035
NP_001300958 (OMIM: 605402) programmed cell death ( 245) 187 40.7 0.0036
NP_056074 (OMIM: 605717) ICOS ligand isoform a pre ( 302) 188 41.0 0.0037
XP_011527817 (OMIM: 605717) ICOS ligand isoform X3 ( 304) 188 41.0 0.0037
XP_011527818 (OMIM: 605717) ICOS ligand isoform X4 ( 334) 188 41.0 0.0039
XP_011527816 (OMIM: 605717) ICOS ligand isoform X2 ( 361) 188 41.1 0.0041
>>NP_005182 (OMIM: 112203) T-lymphocyte activation antig (288 aa)
initn: 1950 init1: 1950 opt: 1950 Z-score: 1647.2 bits: 312.7 E(92320): 5.6e-85
Smith-Waterman score: 1950; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KE1 MGHTRRQGTSPSKCPYLNFFQLLVLAGLSHFCSGVIHVTKEVKEVATLSCGHNVSVEELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MGHTRRQGTSPSKCPYLNFFQLLVLAGLSHFCSGVIHVTKEVKEVATLSCGHNVSVEELA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 QTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 YEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWNTTKQEHFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWNTTKQEHFP
190 200 210 220 230 240
250 260 270 280
pF1KE1 DNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNERLRRESVRPV
::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNERLRRESVRPV
250 260 270 280
>>NP_008820 (OMIM: 601020) T-lymphocyte activation antig (323 aa)
initn: 144 init1: 54 opt: 277 Z-score: 252.2 bits: 54.7 E(92320): 2.8e-07
Smith-Waterman score: 277; 26.0% identity (57.4% similar) in 277 aa overlap (24-279:6-271)
10 20 30 40 50
pF1KE1 MGHTRRQGTSPSKCPYLNFFQLLVLAGLSHFCSGV--IHVTKEVKEVATLSCGH-NVSVE
.: .. . ::. ... .:.: : : : . .
NP_008 MGLSNILFVMAFLLSGAAPLKIQAYFNETADLPCQFANSQNQ
10 20 30 40
60 70 80 90 100 110
pF1KE1 ELAQTRIYWQKEKKMVLT-MMSGDM---NIWPEYKNRTIFDITNNLSIVILALRPSDEGT
:.. ..:: ....::. .. : .. .: .:: :: ... .. . :. .:.:
NP_008 SLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFD-SDSWTLRLHNLQIKDKGL
50 60 70 80 90 100
120 130 140 150 160
pF1KE1 YECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRII-----CSTSGGF
:.:.. . . .. : : . ::: :.: : : .: ::: . . ::. :.
NP_008 YQCIIHHKKPTGMIRIHQMNSELSVLANFSQPEI----VPISNITENVYINLTCSSIHGY
110 120 130 140 150
170 180 190 200 210 220
pF1KE1 PEPH-LSWL---ENGE-ELNAINTTVSQDPETELYAVSSKLDF---NMTTNHSFMCLIKY
:::. .: : .:. : ..: ::: :::: :: .:. ..:.: ...:...
NP_008 PEPKKMSVLLRTKNSTIEYDGIMQK-SQDNVTELYDVSISLSVSFPDVTSNMTIFCILET
160 170 180 190 200 210
230 240 250 260 270
pF1KE1 GHLRV-NQTFNWNTTKQEHFPDNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNER
. :. .. :. . . ::.. : : . .: .:: ...:. .... :
NP_008 DKTRLLSSPFSIELEDPQPPPDHI-P-W---ITAVLPTVIICVMVFCLILWKWKKKKRPR
220 230 240 250 260 270
280
pF1KE1 LRRESVRPV
NP_008 NSYKCGTNTMEREESEQTKKREKIHIPERSDEAQRVFKSSKTSSCDKSDTCF
280 290 300 310 320
>>NP_787058 (OMIM: 601020) T-lymphocyte activation antig (329 aa)
initn: 144 init1: 54 opt: 276 Z-score: 251.2 bits: 54.6 E(92320): 3.2e-07
Smith-Waterman score: 276; 25.6% identity (57.4% similar) in 277 aa overlap (24-279:12-277)
10 20 30 40 50
pF1KE1 MGHTRRQGTSPSKCPYLNFFQLLVLAGLSHFCSGV--IHVTKEVKEVATLSCGH-NVSVE
.: .. . ::. ... .:.: : : : . .
NP_787 MDPQCTMGLSNILFVMAFLLSGAAPLKIQAYFNETADLPCQFANSQNQ
10 20 30 40
60 70 80 90 100 110
pF1KE1 ELAQTRIYWQKEKKMVLT-MMSGDM---NIWPEYKNRTIFDITNNLSIVILALRPSDEGT
:.. ..:: ....::. .. : .. .: .:: :: ... .. . :. .:.:
NP_787 SLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFD-SDSWTLRLHNLQIKDKGL
50 60 70 80 90 100
120 130 140 150 160
pF1KE1 YECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRII-----CSTSGGF
:.:.. . . .. : : . ::: :.: : : .: ::: . . ::. :.
NP_787 YQCIIHHKKPTGMIRIHQMNSELSVLANFSQPEI----VPISNITENVYINLTCSSIHGY
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE1 PEPH-LSWL---ENGE-ELNAINTTVSQDPETELYAVSSKLDF---NMTTNHSFMCLIKY
:::. .: : .:. : ... ::: :::: :: .:. ..:.: ...:...
NP_787 PEPKKMSVLLRTKNSTIEYDGVMQK-SQDNVTELYDVSISLSVSFPDVTSNMTIFCILET
170 180 190 200 210 220
230 240 250 260 270
pF1KE1 GHLRV-NQTFNWNTTKQEHFPDNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNER
. :. .. :. . . ::.. : : . .: .:: ...:. .... :
NP_787 DKTRLLSSPFSIELEDPQPPPDHI-P-W---ITAVLPTVIICVMVFCLILWKWKKKKRPR
230 240 250 260 270
280
pF1KE1 LRRESVRPV
NP_787 NSYKCGTNTMEREESEQTKKREKIHIPERSDEAQRVFKSSKTSSCDKSDTCF
280 290 300 310 320
>>NP_795711 (OMIM: 601020) T-lymphocyte activation antig (275 aa)
initn: 144 init1: 54 opt: 247 Z-score: 227.9 bits: 50.0 E(92320): 6.4e-06
Smith-Waterman score: 247; 27.7% identity (59.6% similar) in 235 aa overlap (24-237:6-234)
10 20 30 40 50
pF1KE1 MGHTRRQGTSPSKCPYLNFFQLLVLAGLSHFCSGV--IHVTKEVKEVATLSCGH-NVSVE
.: .. . ::. ... .:.: : : : . .
NP_795 MGLSNILFVMAFLLSGAAPLKIQAYFNETADLPCQFANSQNQ
10 20 30 40
60 70 80 90 100 110
pF1KE1 ELAQTRIYWQKEKKMVLT-MMSGDM---NIWPEYKNRTIFDITNNLSIVILALRPSDEGT
:.. ..:: ....::. .. : .. .: .:: :: ... .. . :. .:.:
NP_795 SLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFD-SDSWTLRLHNLQIKDKGL
50 60 70 80 90 100
120 130 140 150 160
pF1KE1 YECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRII-----CSTSGGF
:.:.. . . .. : : . ::: :.: : : .: ::: . . ::. :.
NP_795 YQCIIHHKKPTGMIRIHQMNSELSVLANFSQPEI----VPISNITENVYINLTCSSIHGY
110 120 130 140 150
170 180 190 200 210 220
pF1KE1 PEPH-LSWL---ENGE-ELNAINTTVSQDPETELYAVSSKLDF---NMTTNHSFMCLIKY
:::. .: : .:. : ..: ::: :::: :: .:. ..:.: ...:...
NP_795 PEPKKMSVLLRTKNSTIEYDGIMQK-SQDNVTELYDVSISLSVSFPDVTSNMTIFCILET
160 170 180 190 200 210
230 240 250 260 270
pF1KE1 GHLRV-NQTFNWNTTKQEHFPDNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNER
. :. .. :. .:. .:
NP_795 DKTRLLSSPFSIGTNTMEREESEQTKKREKIHIPERSDEAQRVFKSSKTSSCDKSDTCF
220 230 240 250 260 270
>>NP_001193854 (OMIM: 601020) T-lymphocyte activation an (247 aa)
initn: 89 init1: 54 opt: 226 Z-score: 211.0 bits: 46.7 E(92320): 5.6e-05
Smith-Waterman score: 226; 27.9% identity (57.4% similar) in 204 aa overlap (90-279:3-195)
60 70 80 90 100 110
pF1KE1 AQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVL
:: :: ... .. . :. .:.: :.:..
NP_001 MGRTSFD-SDSWTLRLHNLQIKDKGLYQCIIH
10 20 30
120 130 140 150 160 170
pF1KE1 KYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRII-----CSTSGGFPEPH-L
. . .. : : . ::: :.: : : .: ::: . . ::. :.:::. .
NP_001 HKKPTGMIRIHQMNSELSVLANFSQPEI----VPISNITENVYINLTCSSIHGYPEPKKM
40 50 60 70 80
180 190 200 210 220
pF1KE1 SWL---ENGE-ELNAINTTVSQDPETELYAVSSKLDF---NMTTNHSFMCLIKYGHLRV-
: : .:. : ..: ::: :::: :: .:. ..:.: ...:... . :.
NP_001 SVLLRTKNSTIEYDGIMQK-SQDNVTELYDVSISLSVSFPDVTSNMTIFCILETDKTRLL
90 100 110 120 130 140
230 240 250 260 270 280
pF1KE1 NQTFNWNTTKQEHFPDNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNERLRRESV
.. :. . . ::.. : : . .: .:: ...:. .... :
NP_001 SSPFSIELEDPQPPPDHI-P-W---ITAVLPTVIICVMVFCLILWKWKKKKRPRNSYKCG
150 160 170 180 190 200
pF1KE1 RPV
NP_001 TNTMEREESEQTKKREKIHIPERSDEAQRVFKSSKTSSCDKSDTCF
210 220 230 240
>>NP_079516 (OMIM: 605715) CD276 antigen isoform b precu (316 aa)
initn: 87 init1: 63 opt: 215 Z-score: 200.6 bits: 45.2 E(92320): 0.00021
Smith-Waterman score: 215; 28.5% identity (53.6% similar) in 239 aa overlap (46-267:46-271)
20 30 40 50 60 70
pF1KE1 YLNFFQLLVLAGLSHFCSGVIHVTKEVKEVATLSCGHNVSVEE---LAQTRIYWQ--KEK
::: : . : : ::: . :: :
NP_079 AALGALWFCLTGALEVQVPEDPVVALVGTDATLCC--SFSPEPGFSLAQLNLIWQLTDTK
20 30 40 50 60 70
80 90 100 110 120
pF1KE1 KMVLTMMSGDMNIWPEYKNRTIF--DIT--NNLSIVILALRPSDEGTYECVVLKYEKDAF
..: .. :. . : ::: . :. .: :. . .: .:::.. : : ..
NP_079 QLVHSFAEGQ-DQGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFV------SI
80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KREHLAEVTLSVKADFPTPSISDFEIPTSNIR-----RIICSTSGGFPEPHLSWLEN-GE
. : :.:.: : . ::.. .: :....: : ::. :.:: .. : .. :
NP_079 RDFGSAAVSLQVAAPYSKPSMT-LE-PNKDLRPGDTVTITCSSYRGYPEAEVFWQDGQGV
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWNTTKQEH-F
:.. :: .. : :. : : : . .: .. ::.. :. . . . : : :
NP_079 PLTGNVTTSQMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMTF
190 200 210 220 230 240
240 250 260 270 280
pF1KE1 PDNLLPSWAITLISVNGIFVICCLTY-CFAPRCRERRRNERLRRESVRPV
: . : :. . .:: : .. :.. :.
NP_079 PPEAL--WVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAEDQDGEGEGSKTALQPL
250 260 270 280 290 300
>>NP_001316557 (OMIM: 605715) CD276 antigen isoform b pr (316 aa)
initn: 87 init1: 63 opt: 215 Z-score: 200.6 bits: 45.2 E(92320): 0.00021
Smith-Waterman score: 215; 28.5% identity (53.6% similar) in 239 aa overlap (46-267:46-271)
20 30 40 50 60 70
pF1KE1 YLNFFQLLVLAGLSHFCSGVIHVTKEVKEVATLSCGHNVSVEE---LAQTRIYWQ--KEK
::: : . : : ::: . :: :
NP_001 AALGALWFCLTGALEVQVPEDPVVALVGTDATLCC--SFSPEPGFSLAQLNLIWQLTDTK
20 30 40 50 60 70
80 90 100 110 120
pF1KE1 KMVLTMMSGDMNIWPEYKNRTIF--DIT--NNLSIVILALRPSDEGTYECVVLKYEKDAF
..: .. :. . : ::: . :. .: :. . .: .:::.. : : ..
NP_001 QLVHSFAEGQ-DQGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFV------SI
80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KREHLAEVTLSVKADFPTPSISDFEIPTSNIR-----RIICSTSGGFPEPHLSWLEN-GE
. : :.:.: : . ::.. .: :....: : ::. :.:: .. : .. :
NP_001 RDFGSAAVSLQVAAPYSKPSMT-LE-PNKDLRPGDTVTITCSSYRGYPEAEVFWQDGQGV
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWNTTKQEH-F
:.. :: .. : :. : : : . .: .. ::.. :. . . . : : :
NP_001 PLTGNVTTSQMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMTF
190 200 210 220 230 240
240 250 260 270 280
pF1KE1 PDNLLPSWAITLISVNGIFVICCLTY-CFAPRCRERRRNERLRRESVRPV
: . : :. . .:: : .. :.. :.
NP_001 PPEAL--WVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAEDQDGEGEGSKTALQPL
250 260 270 280 290 300
>>XP_016866546 (OMIM: 606000,612387) butyrophilin-like p (482 aa)
initn: 103 init1: 80 opt: 208 Z-score: 192.7 bits: 44.3 E(92320): 0.00059
Smith-Waterman score: 208; 26.2% identity (57.6% similar) in 229 aa overlap (42-257:259-477)
20 30 40 50 60 70
pF1KE1 SKCPYLNFFQLLVLAGLSHFCSGVIHVTKEVKEVATLSCGHNVSVEELAQT-RIYWQKEK
: : :.: .: . ::. .. :.. .
XP_016 KGSVISLPEKLQTELASLKVNGPSQPILVRVGEDIQLTC--YLSPKANAQSMEVRWDRSH
230 240 250 260 270 280
80 90 100 110 120
pF1KE1 KM--VLTMMSGDM---NIWPEYKNRTIF--DITNN--LSIVILALRPSDEGTYECVVLKY
.. : ..:.:: . ::..::.. : .. :.. ::. ::::.: :.:. .
XP_016 RYPAVHVYMDGDHVAGEQMAEYRGRTVLVSDAIDEGRLTLQILSARPSDDGQYRCL---F
290 300 310 320 330 340
130 140 150 160 170 180
pF1KE1 EKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLE-NGE
::: .: : . :.: . .: :. : .. . .::..: ::.::. : . .:.
XP_016 EKDDVYQE--ASLDLKVVSLGSSPLIT-VEGQEDGEMQPMCSSDGWFPQPHVPWRDMEGK
350 360 370 380 390 400
190 200 210 220 230
pF1KE1 ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQ--TFNWNTTKQEH
. . . ...: . :. :.. : . . . : :. : .. ::. . ...
XP_016 TIPSSSQALTQGSHG-LFHVQTLLRVTNISAVDVTCSISIPFLGEEKIATFSLSESRMTF
410 420 430 440 450
240 250 260 270 280
pF1KE1 FPDNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNERLRRESVRPV
. .:: :.. : . :.
XP_016 LWKTLL-VWGLLLAVAVGLPRKRS
460 470 480
>>NP_001291490 (OMIM: 606000,612387) butyrophilin-like p (482 aa)
initn: 103 init1: 80 opt: 208 Z-score: 192.7 bits: 44.3 E(92320): 0.00059
Smith-Waterman score: 208; 26.2% identity (57.6% similar) in 229 aa overlap (42-257:259-477)
20 30 40 50 60 70
pF1KE1 SKCPYLNFFQLLVLAGLSHFCSGVIHVTKEVKEVATLSCGHNVSVEELAQT-RIYWQKEK
: : :.: .: . ::. .. :.. .
NP_001 KGSVISLPEKLQTELASLKVNGPSQPILVRVGEDIQLTC--YLSPKANAQSMEVRWDRSH
230 240 250 260 270 280
80 90 100 110 120
pF1KE1 KM--VLTMMSGDM---NIWPEYKNRTIF--DITNN--LSIVILALRPSDEGTYECVVLKY
.. : ..:.:: . ::..::.. : .. :.. ::. ::::.: :.:. .
NP_001 RYPAVHVYMDGDHVAGEQMAEYRGRTVLVSDAIDEGRLTLQILSARPSDDGQYRCL---F
290 300 310 320 330 340
130 140 150 160 170 180
pF1KE1 EKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLE-NGE
::: .: : . :.: . .: :. : .. . .::..: ::.::. : . .:.
NP_001 EKDDVYQE--ASLDLKVVSLGSSPLIT-VEGQEDGEMQPMCSSDGWFPQPHVPWRDMEGK
350 360 370 380 390 400
190 200 210 220 230
pF1KE1 ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQ--TFNWNTTKQEH
. . . ...: . :. :.. : . . . : :. : .. ::. . ...
NP_001 TIPSSSQALTQGSHG-LFHVQTLLRVTNISAVDVTCSISIPFLGEEKIATFSLSESRMTF
410 420 430 440 450
240 250 260 270 280
pF1KE1 FPDNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNERLRRESVRPV
. .:: :.. : . :.
NP_001 LWKTLL-VWGLLLAVAVGLPRKRS
460 470 480
>>NP_001723 (OMIM: 601610) butyrophilin subfamily 1 memb (526 aa)
initn: 43 init1: 43 opt: 197 Z-score: 183.1 bits: 42.7 E(92320): 0.002
Smith-Waterman score: 197; 26.3% identity (55.7% similar) in 262 aa overlap (42-283:42-287)
20 30 40 50 60
pF1KE1 SKCPYLNFFQLLVLAGLSHFCSGVIHVTKEVKEVATLSC--GHNVSVEELAQTRIYWQKE
: : : : : . :.:.:.: . : . .:
NP_001 CLLTLILLQLPKLDSAPFDVIGPPEPILAVVGEDAELPCRLSPNASAEHL-ELRWFRKKV
20 30 40 50 60 70
70 80 90 100 110 120
pF1KE1 KKMVLTMMSG---DMNIWPEYKNRTIF--D--ITNNLSIVILALRPSDEGTYECVVLKYE
. ::. .: . . :::..:. . : . ... : ..: ::.: : : ..
NP_001 SPAVLVHRDGREQEAEQMPEYRGRATLVQDGIAKGRVALRIRGVRVSDDGEYTCF---FR
80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSW-LENGEE
.:. .: : : :.: : : :: ... .. . :.. : .:::...: .::.
NP_001 EDGSYEEAL--VHLKVAALGSDPHIS-MQVQENGEICLECTSVGWYPEPQVQWRTSKGEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LNAINTTVSQDPETE-LYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWNTTKQEHFP
. .:. :..:. : :..:.... . :. .. : :. : .. . . .:
NP_001 FP--STSESRNPDEEGLFTVAASVIIRDTSAKNVSCYIQ------NLLLGQEKKVEISIP
190 200 210 220 230
250 260 270 280
pF1KE1 DNLLPS---WAIT---LISVNGIFVICCLTYC---FAPRCRERRRNERLRRESVRPV
. :: : .. .. : :...: . . . : :::: :: .:
NP_001 ASSLPRLTPWIVAVAVILMVLGLLTIGSIFFTWRLYNERPRERR-NEFSSKERLLEELKW
240 250 260 270 280 290
NP_001 KKATLHAVDVTLDPDTAHPHLFLYEDSKSVRLEDSRQKLPEKTERFDSWPCVLGRETFTS
300 310 320 330 340 350
288 residues in 1 query sequences
64369986 residues in 92320 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Oct 24 21:39:14 2019 done: Thu Oct 24 21:39:14 2019
Total Scan time: 4.180 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]