FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1824, 341 aa 1>>>pF1KE1824 341 - 341 aa - 341 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.1912+/-0.00094; mu= 4.3768+/- 0.057 mean_var=179.0821+/-35.725, 0's: 0 Z-trim(111.9): 21 B-trim: 0 in 0/51 Lambda= 0.095840 statistics sampled from 12893 (12910) to 12893 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.732), E-opt: 0.2 (0.386), width: 16 Scan time: 1.270 The best scores are: opt bits E(33420) CCDS5285.1 QKI gene_id:9444|Hs109|chr6 ( 341) 2246 322.4 3.5e-88 CCDS75546.1 QKI gene_id:9444|Hs109|chr6 ( 333) 2177 312.8 2.6e-85 CCDS5286.1 QKI gene_id:9444|Hs109|chr6 ( 319) 2059 296.5 2e-80 CCDS43525.1 QKI gene_id:9444|Hs109|chr6 ( 319) 2057 296.2 2.5e-80 CCDS5287.1 QKI gene_id:9444|Hs109|chr6 ( 325) 2052 295.5 4e-80 CCDS6374.1 KHDRBS3 gene_id:10656|Hs109|chr8 ( 346) 479 78.1 1.3e-14 CCDS4963.1 KHDRBS2 gene_id:202559|Hs109|chr6 ( 349) 475 77.5 1.9e-14 CCDS350.1 KHDRBS1 gene_id:10657|Hs109|chr1 ( 443) 467 76.5 4.8e-14 >>CCDS5285.1 QKI gene_id:9444|Hs109|chr6 (341 aa) initn: 2246 init1: 2246 opt: 2246 Z-score: 1696.8 bits: 322.4 E(33420): 3.5e-88 Smith-Waterman score: 2246; 100.0% identity (100.0% similar) in 341 aa overlap (1-341:1-341) 10 20 30 40 50 60 pF1KE1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 250 260 270 280 290 300 310 320 330 340 pF1KE1 LEYPIEPSGVLGAVATKVRRHDMRVHPYQRIVTADRAATGN ::::::::::::::::::::::::::::::::::::::::: CCDS52 LEYPIEPSGVLGAVATKVRRHDMRVHPYQRIVTADRAATGN 310 320 330 340 >>CCDS75546.1 QKI gene_id:9444|Hs109|chr6 (333 aa) initn: 2189 init1: 1391 opt: 2177 Z-score: 1645.4 bits: 312.8 E(33420): 2.6e-85 Smith-Waterman score: 2177; 97.7% identity (97.7% similar) in 341 aa overlap (1-341:1-333) 10 20 30 40 50 60 pF1KE1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA :::::::::::::::::::::::::::::::: :::::::::::::::::::: CCDS75 PAAEGEDSLKKMQLMELAILNGTYRDANIKSP--------TAQAAPRIITGPAPVLPPAA 190 200 210 220 230 250 260 270 280 290 300 pF1KE1 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 240 250 260 270 280 290 310 320 330 340 pF1KE1 LEYPIEPSGVLGAVATKVRRHDMRVHPYQRIVTADRAATGN ::::::::::::::::::::::::::::::::::::::::: CCDS75 LEYPIEPSGVLGAVATKVRRHDMRVHPYQRIVTADRAATGN 300 310 320 330 >>CCDS5286.1 QKI gene_id:9444|Hs109|chr6 (319 aa) initn: 2057 init1: 2057 opt: 2059 Z-score: 1557.5 bits: 296.5 E(33420): 2e-80 Smith-Waterman score: 2059; 99.1% identity (99.1% similar) in 318 aa overlap (1-317:1-318) 10 20 30 40 50 60 pF1KE1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 250 260 270 280 290 300 310 320 330 340 pF1KE1 LEYPIEPSGVLG-AVATKVRRHDMRVHPYQRIVTADRAATGN :::::::::::: : :: CCDS52 LEYPIEPSGVLGMAFPTKG 310 >>CCDS43525.1 QKI gene_id:9444|Hs109|chr6 (319 aa) initn: 2057 init1: 2057 opt: 2057 Z-score: 1556.0 bits: 296.2 E(33420): 2.5e-80 Smith-Waterman score: 2057; 100.0% identity (100.0% similar) in 312 aa overlap (1-312:1-312) 10 20 30 40 50 60 pF1KE1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 250 260 270 280 290 300 310 320 330 340 pF1KE1 LEYPIEPSGVLGAVATKVRRHDMRVHPYQRIVTADRAATGN :::::::::::: CCDS43 LEYPIEPSGVLGKFFSPWG 310 >>CCDS5287.1 QKI gene_id:9444|Hs109|chr6 (325 aa) initn: 2049 init1: 2049 opt: 2052 Z-score: 1552.1 bits: 295.5 E(33420): 4e-80 Smith-Waterman score: 2052; 96.3% identity (97.2% similar) in 326 aa overlap (1-326:1-325) 10 20 30 40 50 60 pF1KE1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 250 260 270 280 290 300 310 320 330 340 pF1KE1 LEYPIEPSGVLGAVATKVRRHDMRVHPYQRIVTADRAATGN ::::::::::: . : :. .: CCDS52 LEYPIEPSGVLEWIEMPVM-PDISAH 310 320 >>CCDS6374.1 KHDRBS3 gene_id:10656|Hs109|chr8 (346 aa) initn: 300 init1: 280 opt: 479 Z-score: 376.3 bits: 78.1 E(33420): 1.3e-14 Smith-Waterman score: 486; 35.9% identity (60.6% similar) in 287 aa overlap (17-290:5-271) 10 20 30 40 50 60 pF1KE1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT :: .:: .: .. :. :.: ::...:: . .: CCDS63 MEEKYLPELMAEKDSLD--PS----FTHALRLVNQEIEKFQKG----- 10 20 30 70 80 90 100 110 120 pF1KE1 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK .:. :.. .. ... ..: .:. .:::..: :::::..::::: . :.:. :: : CCDS63 -EGKDEEKYIDV--VINKNMKLGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTK 40 50 60 70 80 90 130 140 150 160 170 pF1KE1 IMVRGKGSMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKL . . :::::::: :::. : :. .. :::.:::::: : .: .. .:.::.::. CCDS63 MSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKF 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 LVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITG------- :.: . .: ... ::.::. ::: ..:.. .: . . :: : : CCDS63 LIP--DYNDEIRQAQLQELTYLNGGSENADVPVVRGKPTLRTRGVPAPAITRGRGGVTAR 160 170 180 190 200 210 240 250 260 270 280 pF1KE1 PAPVLPPAALRTPTPAG--PTIMPLIRQIQTAVMPN--GTPHPTAAIVPPGPEAGLIYTP :. :. : . :::: : : :. : . . : :.: ::. :: : . : CCDS63 PVGVVVPRG--TPTPRGVLSTRGPVSRG-RGLLTPRARGVP-PTGYRPPPPPPTQETYGE 220 230 240 250 260 290 300 310 320 330 340 pF1KE1 YEYPYTLAPATSILEYPIEPSGVLGAVATKVRRHDMRVHPYQRIVTADRAATGN :.: CCDS63 YDYDDGYGTAYDEQSYDSYDNSYSTPAQSGADYYDYGHGLSEETYDSYGQEEWTNSRHKA 270 280 290 300 310 320 >>CCDS4963.1 KHDRBS2 gene_id:202559|Hs109|chr6 (349 aa) initn: 340 init1: 271 opt: 475 Z-score: 373.3 bits: 77.5 E(33420): 1.9e-14 Smith-Waterman score: 484; 36.2% identity (59.6% similar) in 287 aa overlap (17-290:6-272) 10 20 30 40 50 60 pF1KE1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT :: .:: .: .. :.: : ::: ::: . . . CCDS49 MEEEKYLPELMAEKDSLD--PSFV----HASRLLAEEIEKFQGS----- 10 20 30 70 80 90 100 110 pF1KE1 LNGSTEKRSAELPDAVG-PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGC .:. : . . :... ..:.:.. .:::.:: :::::..::::: . :.:. ::: CCDS49 -DGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGA 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE1 KIMVRGKGSMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKK :. . :::::::: :::. : :. .. ::...::::: : ..: ....:.::.:: CCDS49 KMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKK 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 LLVPAAEGEDSLKKMQLMELAILNGTY---RDANIKSPALAFSLAATAQAAPRIITGPAP .::: . .: ... :: ::. :::. : .:.. .. .: :: . : : : CCDS49 FLVP--DYNDEIRQEQLRELSYLNGSEDSGRGRGIRGRGI--RIAPTAPSRGR--GGAIP 160 170 180 190 200 210 240 250 260 270 280 pF1KE1 VLPPAALRTPTPAGPTIM-------PLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP :: . . :: : :. :. : . : :.: . .:: : : : CCDS49 PPPPPGRGVLTPRGSTVTRGALPVPPVARGVPTP-RARGAPTVPGYRAPP-PPAHEAYEE 220 230 240 250 260 290 300 310 320 330 340 pF1KE1 YEYPYTLAPATSILEYPIEPSGVLGAVATKVRRHDMRVHPYQRIVTADRAATGN : : CCDS49 YGYDDGYGGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTRSSL 270 280 290 300 310 320 >>CCDS350.1 KHDRBS1 gene_id:10657|Hs109|chr1 (443 aa) initn: 314 init1: 271 opt: 467 Z-score: 365.8 bits: 76.5 E(33420): 4.8e-14 Smith-Waterman score: 481; 37.7% identity (57.7% similar) in 300 aa overlap (10-295:96-376) 10 20 30 pF1KE1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFN : .: :: .:: .: .. :.: . CCDS35 LLPPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEKDSLD--PSF----T 70 80 90 100 110 40 50 60 70 80 90 pF1KE1 HLERLLDEEISRVRKDMYNDTLNGSTEKRSAE--LPDAVGPIVQLQEKLYVPVKEYPDFN : .:: :: ...: :...: . : : ..:.:.. .:::.:: :: CCDS35 HAMQLLTAEIEKIQK--------GDSKKDDEENYLDLFSHKNMKLKERVLIPVKQYPKFN 120 130 140 150 160 170 100 110 120 130 140 150 pF1KE1 FVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR--GKPNWEHLNEDLHVLI :::.::::.: : :.:. ::: :: : :::::::: :::. : : :.. ::: ::::.: CCDS35 FVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFI 180 190 200 210 220 230 160 170 180 190 200 210 pF1KE1 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKS-PAL : .: . .:.:::::.::: . :.. . :..::. :::. . . .. :. CCDS35 EVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNGVPEPSRGRGVPVR 240 250 260 270 280 220 230 240 250 260 270 pF1KE1 AFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIM---PLIRQIQTAVMPNGTPHP- . . : .:: : .: : .:: ::. .: . : . :.: : CCDS35 GRGAAPPPPPVPRG-RGVGP--PRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPR 290 300 310 320 330 340 280 290 300 310 320 pF1KE1 --TAAI--VP-PGPEAGLIYTPYEYPYTLAPATSILEYPIEPSGVLGAVATKVRRHDMRV ::.: .: : : : : : : : : CCDS35 ARTAGIQRIPLPPPPAPETYEEYGYDDTYAEQSYEGYEGYYSQSQGDSEYYDYGHGEVQD 350 360 370 380 390 400 341 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Jun 20 10:35:54 2019 done: Thu Jun 20 10:35:55 2019 Total Scan time: 1.270 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]