Result of FASTA (ccds) for
pF1KE2200
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2200, 517 aa
1>>>pF1KE2200 517 - 517 aa - 517 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.8372+/-0.00109; mu= -8.5273+/- 0.065
mean_var=475.2933+/-100.171, 0's: 0 Z-trim(116.6): 787 B-trim: 462 in 1/54
Lambda= 0.058829
statistics sampled from 16356 (17232) to 16356 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.799), E-opt: 0.2 (0.529), width: 16
Scan time: 3.890
The best scores are: opt bits E(32554)
CCDS7878.2 WT1 gene_id:7490|Hs108|chr11 ( 517) 3711 329.2 7e-90
CCDS44562.1 WT1 gene_id:7490|Hs108|chr11 ( 514) 3679 326.5 4.6e-89
CCDS44561.1 WT1 gene_id:7490|Hs108|chr11 ( 497) 2309 210.2 4.5e-54
CCDS55751.1 WT1 gene_id:7490|Hs108|chr11 ( 302) 2116 193.6 2.7e-49
CCDS55750.1 WT1 gene_id:7490|Hs108|chr11 ( 288) 1310 125.2 1e-28
>>CCDS7878.2 WT1 gene_id:7490|Hs108|chr11 (517 aa)
initn: 3711 init1: 3711 opt: 3711 Z-score: 1727.1 bits: 329.2 E(32554): 7e-90
Smith-Waterman score: 3711; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KE2 MQDPASTCVPEPASQHTLRSGPGCLQQPEQQGVRDPGGIWAKLGAAEASAERLQGRRSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 MQDPASTCVPEPASQHTLRSGPGCLQQPEQQGVRDPGGIWAKLGAAEASAERLQGRRSRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ASGSEPQQMGSDVRDLNALLPAVPSLGGGGGCALPVSGAAQWAPVLDFAPPGASAYGSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 ASGSEPQQMGSDVRDLNALLPAVPSLGGGGGCALPVSGAAQWAPVLDFAPPGASAYGSLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GPAPPPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCLSAFTVHFSGQFTGTAGACRYGPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 GPAPPPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCLSAFTVHFSGQFTGTAGACRYGPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GPPPPSQASSGQARMFPNAPYLPSCLESQPAIRNQGYSTVTFDGTPSYGHTPSHHAAQFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 GPPPPSQASSGQARMFPNAPYLPSCLESQPAIRNQGYSTVTFDGTPSYGHTPSHHAAQFP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 NHSFKHEDPMGQQGSLGEQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYSSDNLYQMTSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 NHSFKHEDPMGQQGSLGEQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYSSDNLYQMTSQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 LECMTWNQMNLGATLKGVAAGSSSSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 LECMTWNQMNLGATLKGVAAGSSSSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 VFRGIQDVRRVPGVAPTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 VFRGIQDVRRVPGVAPTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGKTSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGKTSEK
430 440 450 460 470 480
490 500 510
pF1KE2 PFSCRWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL
:::::::::::::::::::::::::::::::::::::
CCDS78 PFSCRWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL
490 500 510
>>CCDS44562.1 WT1 gene_id:7490|Hs108|chr11 (514 aa)
initn: 3501 init1: 3413 opt: 3679 Z-score: 1712.5 bits: 326.5 E(32554): 4.6e-89
Smith-Waterman score: 3679; 99.4% identity (99.4% similar) in 517 aa overlap (1-517:1-514)
10 20 30 40 50 60
pF1KE2 MQDPASTCVPEPASQHTLRSGPGCLQQPEQQGVRDPGGIWAKLGAAEASAERLQGRRSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MQDPASTCVPEPASQHTLRSGPGCLQQPEQQGVRDPGGIWAKLGAAEASAERLQGRRSRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ASGSEPQQMGSDVRDLNALLPAVPSLGGGGGCALPVSGAAQWAPVLDFAPPGASAYGSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ASGSEPQQMGSDVRDLNALLPAVPSLGGGGGCALPVSGAAQWAPVLDFAPPGASAYGSLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GPAPPPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCLSAFTVHFSGQFTGTAGACRYGPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GPAPPPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCLSAFTVHFSGQFTGTAGACRYGPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GPPPPSQASSGQARMFPNAPYLPSCLESQPAIRNQGYSTVTFDGTPSYGHTPSHHAAQFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GPPPPSQASSGQARMFPNAPYLPSCLESQPAIRNQGYSTVTFDGTPSYGHTPSHHAAQFP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 NHSFKHEDPMGQQGSLGEQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYSSDNLYQMTSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NHSFKHEDPMGQQGSLGEQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYSSDNLYQMTSQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 LECMTWNQMNLGATLKGVAAGSSSSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LECMTWNQMNLGATLKGVAAGSSSSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 VFRGIQDVRRVPGVAPTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VFRGIQDVRRVPGVAPTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGKTSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS44 YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG---EK
430 440 450 460 470
490 500 510
pF1KE2 PFSCRWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL
:::::::::::::::::::::::::::::::::::::
CCDS44 PFSCRWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL
480 490 500 510
>>CCDS44561.1 WT1 gene_id:7490|Hs108|chr11 (497 aa)
initn: 3387 init1: 2301 opt: 2309 Z-score: 1084.3 bits: 210.2 E(32554): 4.5e-54
Smith-Waterman score: 3528; 96.1% identity (96.1% similar) in 517 aa overlap (1-517:1-497)
10 20 30 40 50 60
pF1KE2 MQDPASTCVPEPASQHTLRSGPGCLQQPEQQGVRDPGGIWAKLGAAEASAERLQGRRSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MQDPASTCVPEPASQHTLRSGPGCLQQPEQQGVRDPGGIWAKLGAAEASAERLQGRRSRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ASGSEPQQMGSDVRDLNALLPAVPSLGGGGGCALPVSGAAQWAPVLDFAPPGASAYGSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ASGSEPQQMGSDVRDLNALLPAVPSLGGGGGCALPVSGAAQWAPVLDFAPPGASAYGSLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GPAPPPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCLSAFTVHFSGQFTGTAGACRYGPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GPAPPPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCLSAFTVHFSGQFTGTAGACRYGPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GPPPPSQASSGQARMFPNAPYLPSCLESQPAIRNQGYSTVTFDGTPSYGHTPSHHAAQFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GPPPPSQASSGQARMFPNAPYLPSCLESQPAIRNQGYSTVTFDGTPSYGHTPSHHAAQFP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 NHSFKHEDPMGQQGSLGEQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYSSDNLYQMTSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NHSFKHEDPMGQQGSLGEQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYSSDNLYQMTSQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 LECMTWNQMNLGATLKGVAAGSSSSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHG
::::::::::::::::: ::::::::::::::::::::::::::
CCDS44 LECMTWNQMNLGATLKG-----------------HSTGYESDNHTTPILCGAQYRIHTHG
310 320 330 340
370 380 390 400 410 420
pF1KE2 VFRGIQDVRRVPGVAPTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VFRGIQDVRRVPGVAPTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE2 YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGKTSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS44 YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG---EK
410 420 430 440 450 460
490 500 510
pF1KE2 PFSCRWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL
:::::::::::::::::::::::::::::::::::::
CCDS44 PFSCRWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL
470 480 490
>>CCDS55751.1 WT1 gene_id:7490|Hs108|chr11 (302 aa)
initn: 2073 init1: 1848 opt: 2116 Z-score: 998.5 bits: 193.6 E(32554): 2.7e-49
Smith-Waterman score: 2116; 98.7% identity (99.0% similar) in 303 aa overlap (215-517:3-302)
190 200 210 220 230 240
pF1KE2 PSQASSGQARMFPNAPYLPSCLESQPAIRNQGYSTVTFDGTPSYGHTPSHHAAQFPNHSF
.:::::::::::::::::::::::::::::
CCDS55 MEKGYSTVTFDGTPSYGHTPSHHAAQFPNHSF
10 20 30
250 260 270 280 290 300
pF1KE2 KHEDPMGQQGSLGEQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYSSDNLYQMTSQLECM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KHEDPMGQQGSLGEQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYSSDNLYQMTSQLECM
40 50 60 70 80 90
310 320 330 340 350 360
pF1KE2 TWNQMNLGATLKGVAAGSSSSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHGVFRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TWNQMNLGATLKGVAAGSSSSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHGVFRG
100 110 120 130 140 150
370 380 390 400 410 420
pF1KE2 IQDVRRVPGVAPTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 IQDVRRVPGVAPTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCD
160 170 180 190 200 210
430 440 450 460 470 480
pF1KE2 FKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGKTSEKPFSC
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
CCDS55 FKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG---EKPFSC
220 230 240 250 260
490 500 510
pF1KE2 RWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL
:::::::::::::::::::::::::::::::::
CCDS55 RWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL
270 280 290 300
>>CCDS55750.1 WT1 gene_id:7490|Hs108|chr11 (288 aa)
initn: 1310 init1: 1310 opt: 1310 Z-score: 629.0 bits: 125.2 E(32554): 1e-28
Smith-Waterman score: 1997; 94.1% identity (94.4% similar) in 303 aa overlap (215-517:3-288)
190 200 210 220 230 240
pF1KE2 PSQASSGQARMFPNAPYLPSCLESQPAIRNQGYSTVTFDGTPSYGHTPSHHAAQFPNHSF
.:::::::::::::::::::::::::::::
CCDS55 MEKGYSTVTFDGTPSYGHTPSHHAAQFPNHSF
10 20 30
250 260 270 280 290 300
pF1KE2 KHEDPMGQQGSLGEQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYSSDNLYQMTSQLECM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KHEDPMGQQGSLGEQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYSSDNLYQMTSQLECM
40 50 60 70 80 90
310 320 330 340 350 360
pF1KE2 TWNQMNLGATLKGVAAGSSSSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHGVFRG
::::::::::::: ::::::::::::::::::::::::::::::
CCDS55 TWNQMNLGATLKG-----------------HSTGYESDNHTTPILCGAQYRIHTHGVFRG
100 110 120 130
370 380 390 400 410 420
pF1KE2 IQDVRRVPGVAPTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 IQDVRRVPGVAPTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCD
140 150 160 170 180 190
430 440 450 460 470 480
pF1KE2 FKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGKTSEKPFSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGKTSEKPFSC
200 210 220 230 240 250
490 500 510
pF1KE2 RWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL
:::::::::::::::::::::::::::::::::
CCDS55 RWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL
260 270 280
517 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 15:11:48 2016 done: Sun Nov 6 15:11:48 2016
Total Scan time: 3.890 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]