(Circular) (Six-base) MAPSORT of: pF1KE2346.seq Check: 8342 from: 1 to: 11525 pF1KE2346 11525 bp With 182 enzymes: SgfI * November 15, 2011 13:19 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 733 733 Size: 11525 AatII G_ACGT'C Cuts at: 8228 8228 Size: 11525 AccI GT'mk_AC Cuts at: 2891 5513 5631 8396 8563 2891 Size: 2622 118 2765 167 5853 Fragments arranged by size: 5853 2765 2622 167 118 Acc65I G'GTAC_C Cuts at: 8541 8541 Size: 11525 AclI AA'CG_TT Cuts at: 11365 11365 Size: 11525 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1193 1415 1829 1834 2459 2522 3698 3995 4327 Size: 222 414 5 625 63 1176 297 332 Cuts at: 4327 4509 5231 8135 8295 9350 9782 10529 10797 Size: 182 722 2904 160 1055 432 747 268 Cuts at: 10797 1193 Size: 1921 Fragments arranged by size: 2904 1921 1176 1055 747 722 625 432 414 332 297 268 222 182 160 63 5 AfeI AGC'GCT Cuts at: 1576 7275 1576 Size: 5699 5826 AflIII A'CryG_T Cuts at: 3309 6844 7623 8877 9981 10958 3309 Size: 3535 779 1254 1104 977 3876 Fragments arranged by size: 3876 3535 1254 1104 977 779 AgeI A'CCGG_T Cuts at: 9913 9913 Size: 11525 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 8401 8401 Size: 11525 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 6918 6950 6918 Size: 32 11493 AlwNI CAG_nnn'CTG Cuts at: 1438 3568 3798 4849 7102 7183 7486 8830 10397 Size: 2130 230 1051 2253 81 303 1344 1567 Cuts at: 10397 1438 Size: 2566 Fragments arranged by size: 2566 2253 2130 1567 1344 1051 303 230 81 ApaLI G'TGCA_C Cuts at: 859 10295 859 Size: 9436 2089 ApoI r'AATT_y Cuts at: 498 2926 2970 3785 4129 4472 4797 5128 5894 Size: 2428 44 815 344 343 325 331 766 Cuts at: 5894 6099 6411 6418 7665 7692 7711 7796 8178 Size: 205 312 7 1247 27 19 85 382 Cuts at: 8178 8529 10878 11134 498 Size: 351 2349 256 889 Fragments arranged by size: 2428 2349 1247 889 815 766 382 351 344 343 331 325 312 256 205 85 44 27 19 7 AseI AT'TA_AT Cuts at: 20 1723 20 Size: 1703 9822 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 11525 AvaI C'yCGr_G Cuts at: 1028 8545 1028 Size: 7517 4008 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 6435 6468 6435 Size: 33 11492 BamHI G'GATC_C Cuts at: 8550 8550 Size: 11525 BanI G'GyrC_C Cuts at: 6451 8385 8541 8955 9203 9238 6451 Size: 1934 156 414 248 35 8738 Fragments arranged by size: 8738 1934 414 248 156 35 BanII G_rGCy'C Cuts at: 8539 9569 8539 Size: 1030 10495 BbeI G_GCGC'C Cuts at: 8959 9207 8959 Size: 248 11277 BbsI GAAGACnn'nnnn_ Cuts at: 1199 2637 6899 7661 1199 Size: 1438 4262 762 5063 Fragments arranged by size: 5063 4262 1438 762 BbvCI CC'TCA_GC Cuts at: 5636 5636 Size: 11525 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 5899 5933 5899 Size: 34 11491 BciVI GTATCCnnnnn_n' Cuts at: 655 5676 9423 10184 11525 655 Size: 5021 3747 761 1341 655 Fragments arranged by size: 5021 3747 1341 761 655 BclI T'GATC_A Cuts at: 7122 9045 7122 Size: 1923 9602 BfrBI ATG'CAT Cuts at: 1525 5259 7458 1525 Size: 3734 2199 5592 Fragments arranged by size: 5592 3734 2199 BglI GCCn_nnn'nGGC Cuts at: 406 4839 8372 406 Size: 4433 3533 3559 Fragments arranged by size: 4433 3559 3533 BglII A'GATC_T Cuts at: 925 2818 3087 6321 9040 11077 925 Size: 1893 269 3234 2719 2037 1373 Fragments arranged by size: 3234 2719 2037 1893 1373 269 BlpI GC'TnA_GC Cuts at: 3104 8360 8637 3104 Size: 5256 277 5992 Fragments arranged by size: 5992 5256 277 Bme1580I G_kGCm'C Cuts at: 863 7090 9150 9243 10299 863 Size: 6227 2060 93 1056 2089 Fragments arranged by size: 6227 2089 2060 1056 93 BmgBI CAC'GTC Cuts at: 2554 7380 2554 Size: 4826 6699 BmrI ACTGGGnnnn_n' Cuts at: 619 5136 5513 6981 8737 8818 9153 11297 619 Size: 4517 377 1468 1756 81 335 2144 847 Fragments arranged by size: 4517 2144 1756 1468 847 377 335 81 BmtI G_CTAG'C Cuts at: 8033 8033 Size: 11525 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 1596 4653 6009 9892 1596 Size: 3057 1356 3883 3229 Fragments arranged by size: 3883 3229 3057 1356 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 546 1046 6802 546 Size: 500 5756 5269 Fragments arranged by size: 5756 5269 500 Bpu10I CC'TnA_GC Cuts at: 1925 5636 1925 Size: 3711 7814 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 942 963 2721 4419 6988 8701 9580 10072 10370 Size: 21 1758 1698 2569 1713 879 492 298 Cuts at: 10370 942 Size: 2097 Fragments arranged by size: 2569 2097 1758 1713 1698 879 492 298 21 BsaI GGTCTCn'nnnn_ Cuts at: 2035 2511 3992 11229 2035 Size: 476 1481 7237 2331 Fragments arranged by size: 7237 2331 1481 476 BsaAI yAC'GTr Cuts at: 6847 8878 6847 Size: 2031 9494 BsaBI GATnn'nnATC Cuts at: 6 1742 2267 6575 9039 11076 6 Size: 1736 525 4308 2464 2037 455 Fragments arranged by size: 4308 2464 2037 1736 525 455 BsaHI Gr'CG_yC Cuts at: 8225 8956 9204 9906 11402 8225 Size: 731 248 702 1496 8348 Fragments arranged by size: 8348 1496 731 702 248 BsaWI w'CCGG_w Cuts at: 8714 9235 9913 10187 10334 10745 8714 Size: 521 678 274 147 411 9494 Fragments arranged by size: 9494 678 521 411 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 3516 3546 4717 4747 5374 5404 5844 5874 6377 Size: 30 1171 30 627 30 440 30 503 Cuts at: 6377 6407 7279 7309 8329 8359 3516 Size: 30 872 30 1020 30 6682 Fragments arranged by size: 6682 1171 1020 872 627 503 440 30 30 30 30 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 3578 3581 4208 4524 6771 8087 8153 8156 3578 Size: 3 627 316 2247 1316 66 3 6947 Fragments arranged by size: 6947 2247 1316 627 316 66 3 3 BseYI C'CCAG_C Cuts at: 1648 3595 6158 8950 9708 10285 10781 1648 Size: 1947 2563 2792 758 577 496 2392 Fragments arranged by size: 2792 2563 2392 1947 758 577 496 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1309 4943 8311 1309 Size: 3634 3368 4523 Fragments arranged by size: 4523 3634 3368 BsiEI CG_ry'CG Cuts at: 104 9067 9113 10321 104 Size: 8963 46 1208 1308 Fragments arranged by size: 8963 1308 1208 46 BsiHKAI G_wGCw'C Cuts at: 863 2107 6050 6555 8539 9317 9507 10299 863 Size: 1244 3943 505 1984 778 190 792 2089 Fragments arranged by size: 3943 2089 1984 1244 792 778 505 190 BsmI GAATG_Cn' Cuts at: 909 1387 2092 909 Size: 478 705 10342 Fragments arranged by size: 10342 705 478 BsmBI CGTCTCn'nnnn_ Cuts at: 1681 1681 Size: 11525 Bsp1286I G_dGCh'C Cuts at: 863 2107 6050 6555 7090 8539 9150 9243 9317 Size: 1244 3943 505 535 1449 611 93 74 Cuts at: 9317 9507 9569 10299 863 Size: 190 62 730 2089 Fragments arranged by size: 3943 2089 1449 1244 730 611 535 505 190 93 74 62 BspEI T'CCGG_A Cuts at: 10745 10745 Size: 11525 BspHI T'CATG_A Cuts at: 3510 10701 3510 Size: 7191 4334 BspMI ACCTGCnnnn'nnnn_ Cuts at: 213 733 2942 7110 8575 8789 9091 9472 213 Size: 520 2209 4168 1465 214 302 381 2266 Fragments arranged by size: 4168 2266 2209 1465 520 381 302 214 BsrBI CCG'CTC Cuts at: 50 9817 9871 11355 11520 50 Size: 9767 54 1484 165 55 Fragments arranged by size: 9767 1484 165 55 54 BsrDI GCAATG_nn' Cuts at: 1142 1263 3015 3863 5068 5186 5888 6185 6249 Size: 121 1752 848 1205 118 702 297 64 Cuts at: 6249 7019 9437 1142 Size: 770 2418 3230 Fragments arranged by size: 3230 2418 1752 1205 848 770 702 297 121 118 64 BsrFI r'CCGG_y Cuts at: 566 2234 9523 9704 9913 566 Size: 1668 7289 181 209 2178 Fragments arranged by size: 7289 2178 1668 209 181 BsrGI T'GTAC_A Cuts at: 456 4088 456 Size: 3632 7893 BssSI C'ACGA_G Cuts at: 1196 2786 9796 10154 1196 Size: 1590 7010 358 2567 Fragments arranged by size: 7010 2567 1590 358 BstAPI GCAn_nnn'nTGC Cuts at: 8902 8902 Size: 11525 BstBI TT'CG_AA Cuts at: 2628 5472 9886 2628 Size: 2844 4414 4267 Fragments arranged by size: 4414 4267 2844 BstYI r'GATC_y Cuts at: 1 925 2647 2818 3087 4182 5002 5435 6321 Size: 924 1722 171 269 1095 820 433 886 Cuts at: 6321 6532 7236 8550 9017 9040 9375 9621 10633 Size: 211 704 1314 467 23 335 246 1012 Cuts at: 10633 10719 10731 11077 1 Size: 86 12 346 449 Fragments arranged by size: 1722 1314 1095 1012 924 886 820 704 467 449 433 346 335 269 246 211 171 86 23 12 Bsu36I CC'TnA_GG Cuts at: 3791 6921 3791 Size: 3130 8395 BtgI C'CryG_G Cuts at: 7305 7305 Size: 11525 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 8223 9475 9656 9819 8223 Size: 1252 181 163 9929 Fragments arranged by size: 9929 1252 181 163 BtsI GCAGTG_nn' Cuts at: 366 3840 4421 7184 8062 8310 8768 366 Size: 3474 581 2763 878 248 458 3123 Fragments arranged by size: 3474 3123 2763 878 581 458 248 DraI TTT'AAA Cuts at: 2838 5021 5900 6417 6591 6794 8524 2838 Size: 2183 879 517 174 203 1730 5839 Fragments arranged by size: 5839 2183 1730 879 517 203 174 DraIII CAC_nnn'GTG Cuts at: 858 3304 858 Size: 2446 9079 DrdI GACnn_nn'nnGTC Cuts at: 385 2780 9231 10089 385 Size: 2395 6451 858 1821 Fragments arranged by size: 6451 2395 1821 858 EaeI y'GGCC_r Cuts at: 3501 4840 5247 8373 9110 9284 9675 9702 11047 Size: 1339 407 3126 737 174 391 27 1345 Cuts at: 11047 3501 Size: 3979 Fragments arranged by size: 3979 3126 1345 1339 737 407 391 174 27 EagI C'GGCC_G Cuts at: 9110 9110 Size: 11525 EarI CTCTTCn'nnn_ Cuts at: 194 245 1749 3455 3699 5798 5978 7433 7925 Size: 51 1504 1706 244 2099 180 1455 492 Cuts at: 7925 9548 9758 194 Size: 1623 210 1961 Fragments arranged by size: 2099 1961 1706 1623 1504 1455 492 244 210 180 51 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 9733 10043 10189 11335 9733 Size: 310 146 1146 9923 Fragments arranged by size: 9923 1146 310 146 EcoICRI GAG'CTC Cuts at: 8537 8537 Size: 11525 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 546 1046 1193 1415 1829 1834 2459 2522 3698 Size: 500 147 222 414 5 625 63 1176 Cuts at: 3698 3995 4327 4509 5231 6802 8135 8295 9350 Size: 297 332 182 722 1571 1333 160 1055 Cuts at: 9350 9782 10529 10797 546 Size: 432 747 268 1274 Fragments arranged by size: 1571 1333 1274 1176 1055 747 722 625 500 432 414 332 297 268 222 182 160 147 63 5 EcoNI CCTnn'n_nnAGG Cuts at: 316 3604 4190 5394 316 Size: 3288 586 1204 6447 Fragments arranged by size: 6447 3288 1204 586 EcoO109I rG'GnC_Cy Cuts at: 1495 6486 8664 1495 Size: 4991 2178 4356 Fragments arranged by size: 4991 4356 2178 EcoRI G'AATT_C Cuts at: 498 6099 8529 498 Size: 5601 2430 3494 Fragments arranged by size: 5601 3494 2430 EcoRV GAT'ATC Cuts at: 1047 1484 1047 Size: 437 11088 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 370 1004 2768 4831 5089 6314 9544 370 Size: 634 1764 2063 258 1225 3230 2351 Fragments arranged by size: 3230 2351 2063 1764 1225 634 258 FspI TGC'GCA Cuts at: 9306 9306 Size: 11525 HaeII r_GCGC'y Cuts at: 1578 7277 8367 8959 9207 10229 11208 1578 Size: 5699 1090 592 248 1022 979 1895 Fragments arranged by size: 5699 1895 1090 1022 979 592 248 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 144 176 462 494 1540 1572 1777 1809 1993 Size: 32 286 32 1046 32 205 32 184 Cuts at: 1993 2025 2452 2484 2515 2547 3160 3192 4987 Size: 32 427 32 31 32 613 32 1795 Cuts at: 4987 5019 5188 5220 6146 6178 6270 6302 6763 Size: 32 169 32 926 32 92 32 461 Cuts at: 6763 6795 6904 6936 7020 7052 7252 7284 7534 Size: 32 109 32 84 32 200 32 250 Cuts at: 7534 7566 9367 9397 9399 9429 144 Size: 32 1801 30 2 30 2240 Fragments arranged by size: 2240 1801 1795 1046 926 613 461 427 286 250 205 200 184 169 109 92 84 32 32 32 32 32 32 32 32 32 32 32 32 32 32 32 32 32 31 30 30 2 HincII GTy'rAC Cuts at: 4907 5632 6475 6609 8223 8564 4907 Size: 725 843 134 1614 341 7868 Fragments arranged by size: 7868 1614 843 725 341 134 HindIII A'AGCT_T Cuts at: 3401 3446 3874 3940 6014 3401 Size: 45 428 66 2074 8912 Fragments arranged by size: 8912 2074 428 66 45 HpaI GTT'AAC Cuts at: 6609 6609 Size: 11525 KasI G'GCGC_C Cuts at: 8955 9203 8955 Size: 248 11277 KpnI G_GTAC'C Cuts at: 8545 8545 Size: 11525 MfeI C'AATT_G Cuts at: 5462 5462 Size: 11525 MluI A'CGCG_T Cuts at: 10958 10958 Size: 11525 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1845 5076 5881 6528 10196 10380 1845 Size: 3231 805 647 3668 184 2990 Fragments arranged by size: 3668 3231 2990 805 647 184 MscI TGG'CCA Cuts at: 3503 4842 5249 9286 3503 Size: 1339 407 4037 5742 Fragments arranged by size: 5742 4037 1339 407 MslI CAynn'nnrTG Cuts at: 2390 2720 3509 5767 6290 6659 7168 9514 9641 Size: 330 789 2258 523 369 509 2346 127 Cuts at: 9641 2390 Size: 4274 Fragments arranged by size: 4274 2346 2258 789 523 509 369 330 127 MspA1I CmG'CkG Cuts at: 183 4030 4846 8636 8950 9310 10323 10568 183 Size: 3847 816 3790 314 360 1013 245 1140 Fragments arranged by size: 3847 3790 1140 1013 816 360 314 245 NaeI GCC'GGC Cuts at: 2236 9706 2236 Size: 7470 4055 NarI GG'CG_CC Cuts at: 8956 9204 8956 Size: 248 11277 NdeI CA'TA_TG Cuts at: 3657 7169 3657 Size: 3512 8013 NgoMIV G'CCGG_C Cuts at: 2234 9704 2234 Size: 7470 4055 NheI G'CTAG_C Cuts at: 8029 8029 Size: 11525 NsiI A_TGCA'T Cuts at: 1527 5261 7460 1527 Size: 3734 2199 5592 Fragments arranged by size: 5592 3734 2199 NspI r_CATG'y Cuts at: 444 669 4077 5927 6178 7229 8578 9078 9985 Size: 225 3408 1850 251 1051 1349 500 907 Cuts at: 9985 444 Size: 1984 Fragments arranged by size: 3408 1984 1850 1349 1051 907 500 251 225 PasI CC'CwG_GG Cuts at: 7728 7728 Size: 11525 PciI A'CATG_T Cuts at: 9981 9981 Size: 11525 PflMI CCAn_nnn'nTGG Cuts at: 2755 6165 2755 Size: 3410 8115 PfoI T'CCnGG_A Cuts at: 8347 8347 Size: 11525 PmeI GTTT'AAAC Cuts at: 8524 8524 Size: 11525 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 10664 10696 10664 Size: 32 11493 PpuMI rG'GwC_Cy Cuts at: 1495 6486 1495 Size: 4991 6534 PshAI GACnn'nnGTC Cuts at: 5584 5584 Size: 11525 PsiI TTA'TAA Cuts at: 4268 7453 4268 Size: 3185 8340 PstI C_TGCA'G Cuts at: 660 4428 7505 8572 9257 660 Size: 3768 3077 1067 685 2928 Fragments arranged by size: 3768 3077 2928 1067 685 PvuI CG_AT'CG Cuts at: 104 104 Size: 11525 PvuII CAG'CTG Cuts at: 183 4846 8950 9310 183 Size: 4663 4104 360 2398 Fragments arranged by size: 4663 4104 2398 360 RsrII CG'GwC_CG Cuts at: 9720 9720 Size: 11525 SacI G_AGCT'C Cuts at: 8539 8539 Size: 11525 SalI G'TCGA_C Cuts at: 5630 8562 5630 Size: 2932 8593 SapI GCTCTTCn'nnn_ Cuts at: 3455 7433 9548 9758 3455 Size: 3978 2115 210 5222 Fragments arranged by size: 5222 3978 2115 210 SbfI CC_TGCA'GG Cuts at: 660 8572 660 Size: 7912 3613 ScaI AGT'ACT Cuts at: 6626 7807 11042 6626 Size: 1181 3235 7109 Fragments arranged by size: 7109 3235 1181 SexAI A'CCwGG_T Cuts at: 317 7202 317 Size: 6885 4640 SfcI C'TryA_G Cuts at: 33 656 1658 2423 3110 4396 4424 5006 5510 Size: 623 1002 765 687 1286 28 582 504 Cuts at: 5510 6356 7501 8337 8568 9253 10246 10437 33 Size: 846 1145 836 231 685 993 191 1121 Fragments arranged by size: 1286 1145 1121 1002 993 846 836 765 687 685 623 582 504 231 191 28 SfoI GGC'GCC Cuts at: 8957 9205 8957 Size: 248 11277 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 11525 SmaI CCC'GGG Cuts at: 8547 8547 Size: 11525 SmlI C'TyrA_G Cuts at: 921 978 1028 2736 4434 6967 8680 9595 10087 Size: 57 50 1708 1698 2533 1713 915 492 Cuts at: 10087 10349 921 Size: 262 2097 Fragments arranged by size: 2533 2097 1713 1708 1698 915 492 262 57 50 SpeI A'CTAG_T Cuts at: 67 2848 5112 5581 67 Size: 2781 2264 469 6011 Fragments arranged by size: 6011 2781 2264 469 SphI G_CATG'C Cuts at: 444 5927 8578 9078 444 Size: 5483 2651 500 2891 Fragments arranged by size: 5483 2891 2651 500 SspI AAT'ATT Cuts at: 3732 3924 5678 6762 3732 Size: 192 1754 1084 8495 Fragments arranged by size: 8495 1754 1084 192 StuI AGG'CCT Cuts at: 2205 2304 7605 2205 Size: 99 5301 6125 Fragments arranged by size: 6125 5301 99 StyI C'CwwG_G Cuts at: 354 1163 4944 8389 8501 8659 9013 354 Size: 809 3781 3445 112 158 354 2866 Fragments arranged by size: 3781 3445 2866 809 354 158 112 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 1332 6898 7000 9108 9241 9700 9909 1332 Size: 5566 102 2108 133 459 209 2948 Fragments arranged by size: 5566 2948 2108 459 209 133 102 TatI w'GTAC_w Cuts at: 456 4088 4121 6019 6624 6669 7805 8258 11040 Size: 3632 33 1898 605 45 1136 453 2782 Cuts at: 11040 456 Size: 941 Fragments arranged by size: 3632 2782 1898 1136 941 605 453 45 33 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 287 319 684 716 977 1009 3516 3548 7279 Size: 32 365 32 261 32 2507 32 3731 Cuts at: 7279 7311 7877 7909 11042 11074 287 Size: 32 566 32 3133 32 738 Fragments arranged by size: 3731 3133 2507 738 566 365 261 32 32 32 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 9322 9322 Size: 11525 XbaI T'CTAG_A Cuts at: 7962 8556 7962 Size: 594 10931 XcmI CCAnnnn_n'nnnnTGG Cuts at: 9020 9020 Size: 11525 XhoI C'TCGA_G Cuts at: 1028 1028 Size: 11525 XmaI C'CCGG_G Cuts at: 8545 8545 Size: 11525 XmnI GAAnn'nnTTC Cuts at: 3525 6299 3525 Size: 2774 8751 ZraI GAC'GTC Cuts at: 8226 8226 Size: 11525 Enzymes that do cut: AarI AatII AccI Acc65I AclI AcuI AfeI AflIII AgeI AlfI AloI AlwNI ApaLI ApoI AseI AsiSI AvaI BaeI BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BfrBI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssSI BstAPI BstBI BstYI Bsu36I BtgI BtgZI BtsI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI EcoRV FalI FspI HaeII Hin4I HincII HindIII HpaI KasI KpnI MfeI MluI MmeI MscI MslI MspA1I NaeI NarI NdeI NgoMIV NheI NsiI NspI PasI PciI PflMI PfoI PmeI PpiI PpuMI PshAI PsiI PstI PvuI PvuII RsrII SacI SalI SapI SbfI ScaI SexAI SfcI SfoI SgfI SmaI SmlI SpeI SphI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AflII AhdI AleI ApaI AscI AvrII BsiWI BssHII BstEII BstXI BstZ17I ClaI CspCI FseI FspAI NcoI NotI NruI PacI PmlI PspOMI PspXI PsrI SacII SanDI SfiI SgrAI SnaBI SrfI SwaI