Result of FASTA (ccds) for
pF1KE2400
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2400, 699 aa
1>>>pF1KE2400 699 - 699 aa - 699 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0471+/-0.00112; mu= 14.9689+/- 0.067
mean_var=59.8743+/-11.994, 0's: 0 Z-trim(101.1): 25 B-trim: 42 in 1/46
Lambda= 0.165750
statistics sampled from 6464 (6472) to 6464 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.544), E-opt: 0.2 (0.194), width: 16
Scan time: 1.530
The best scores are: opt bits E(33420)
CCDS58713.1 GFPT1 gene_id:2673|Hs109|chr2 ( 699) 4598 1108.6 0
CCDS33216.1 GFPT1 gene_id:2673|Hs109|chr2 ( 681) 2954 715.4 6.8e-206
CCDS43411.1 GFPT2 gene_id:9945|Hs109|chr5 ( 682) 2443 593.2 4.2e-169
>>CCDS58713.1 GFPT1 gene_id:2673|Hs109|chr2 (699 aa)
initn: 4598 init1: 4598 opt: 4598 Z-score: 5934.5 bits: 1108.6 E(33420): 0
Smith-Waterman score: 4598; 100.0% identity (100.0% similar) in 699 aa overlap (1-699:1-699)
10 20 30 40 50 60
pF1KE2 MCGIFAYLNYHVPRTRREILETLIKGLQRLEYRGYDSAGVGFDGGNDKDWEANACKIQLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MCGIFAYLNYHVPRTRREILETLIKGLQRLEYRGYDSAGVGFDGGNDKDWEANACKIQLI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 KKKGKVKALDEEVHKQQDMDLDIEFDVHLGIAHTRWATHGEPSPVNSHPQRSDKNNEFIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KKKGKVKALDEEVHKQQDMDLDIEFDVHLGIAHTRWATHGEPSPVNSHPQRSDKNNEFIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 IHNGIITNYKDLKKFLESKGYDFESETDTETIAKLVKYMYDNRESQDTSFTTLVERVIQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IHNGIITNYKDLKKFLESKGYDFESETDTETIAKLVKYMYDNRESQDTSFTTLVERVIQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 LEGAFALVFKSVHFPGQAVGTRRGSPLLIGVRSEHKLSTDHIPILYRTARTQIGSKFTRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LEGAFALVFKSVHFPGQAVGTRRGSPLLIGVRSEHKLSTDHIPILYRTARTQIGSKFTRW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 GSQGERGKDKKGSCNLSRVDSTTCLFPVEEKAVEYYFASDASAVIEHTNRVIFLEDDDVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GSQGERGKDKKGSCNLSRVDSTTCLFPVEEKAVEYYFASDASAVIEHTNRVIFLEDDDVA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 AVVDGRLSIHRIKRTAGDHPGRAVQTLQMELQQIMKGNFSSFMQKEIFEQPESVVNTMRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AVVDGRLSIHRIKRTAGDHPGRAVQTLQMELQQIMKGNFSSFMQKEIFEQPESVVNTMRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 RVNFDDYTVNLGGLKDHIKEIQRCRRLILIACGTSYHAGVATRQVLEELTELPVMVELAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RVNFDDYTVNLGGLKDHIKEIQRCRRLILIACGTSYHAGVATRQVLEELTELPVMVELAS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 DFLDRNTPVFRDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DFLDRNTPVFRDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 HINAGPEIGVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMLGLKRLPDLIKEVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HINAGPEIGVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMLGLKRLPDLIKEVLS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 MDDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MDDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLAL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 VDKLMPVIMIIMRDHTYAKCQNALQQVVARQGRPVVICDKEDTETIKNTKRTIKVPHSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VDKLMPVIMIIMRDHTYAKCQNALQQVVARQGRPVVICDKEDTETIKNTKRTIKVPHSVD
610 620 630 640 650 660
670 680 690
pF1KE2 CLQGILSVIPLQLLAFHLAVLRGYDVDFPRNLAKSVTVE
:::::::::::::::::::::::::::::::::::::::
CCDS58 CLQGILSVIPLQLLAFHLAVLRGYDVDFPRNLAKSVTVE
670 680 690
>>CCDS33216.1 GFPT1 gene_id:2673|Hs109|chr2 (681 aa)
initn: 2954 init1: 2954 opt: 2954 Z-score: 3810.1 bits: 715.4 E(33420): 6.8e-206
Smith-Waterman score: 4428; 97.4% identity (97.4% similar) in 699 aa overlap (1-699:1-681)
10 20 30 40 50 60
pF1KE2 MCGIFAYLNYHVPRTRREILETLIKGLQRLEYRGYDSAGVGFDGGNDKDWEANACKIQLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MCGIFAYLNYHVPRTRREILETLIKGLQRLEYRGYDSAGVGFDGGNDKDWEANACKIQLI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 KKKGKVKALDEEVHKQQDMDLDIEFDVHLGIAHTRWATHGEPSPVNSHPQRSDKNNEFIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KKKGKVKALDEEVHKQQDMDLDIEFDVHLGIAHTRWATHGEPSPVNSHPQRSDKNNEFIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 IHNGIITNYKDLKKFLESKGYDFESETDTETIAKLVKYMYDNRESQDTSFTTLVERVIQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 IHNGIITNYKDLKKFLESKGYDFESETDTETIAKLVKYMYDNRESQDTSFTTLVERVIQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 LEGAFALVFKSVHFPGQAVGTRRGSPLLIGVRSEHKLSTDHIPILYRTARTQIGSKFTRW
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LEGAFALVFKSVHFPGQAVGTRRGSPLLIGVRSEHKLSTDHIPILYRT------------
190 200 210 220
250 260 270 280 290 300
pF1KE2 GSQGERGKDKKGSCNLSRVDSTTCLFPVEEKAVEYYFASDASAVIEHTNRVIFLEDDDVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ------GKDKKGSCNLSRVDSTTCLFPVEEKAVEYYFASDASAVIEHTNRVIFLEDDDVA
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE2 AVVDGRLSIHRIKRTAGDHPGRAVQTLQMELQQIMKGNFSSFMQKEIFEQPESVVNTMRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AVVDGRLSIHRIKRTAGDHPGRAVQTLQMELQQIMKGNFSSFMQKEIFEQPESVVNTMRG
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE2 RVNFDDYTVNLGGLKDHIKEIQRCRRLILIACGTSYHAGVATRQVLEELTELPVMVELAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RVNFDDYTVNLGGLKDHIKEIQRCRRLILIACGTSYHAGVATRQVLEELTELPVMVELAS
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE2 DFLDRNTPVFRDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DFLDRNTPVFRDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGV
410 420 430 440 450 460
490 500 510 520 530 540
pF1KE2 HINAGPEIGVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMLGLKRLPDLIKEVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HINAGPEIGVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMLGLKRLPDLIKEVLS
470 480 490 500 510 520
550 560 570 580 590 600
pF1KE2 MDDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MDDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLAL
530 540 550 560 570 580
610 620 630 640 650 660
pF1KE2 VDKLMPVIMIIMRDHTYAKCQNALQQVVARQGRPVVICDKEDTETIKNTKRTIKVPHSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VDKLMPVIMIIMRDHTYAKCQNALQQVVARQGRPVVICDKEDTETIKNTKRTIKVPHSVD
590 600 610 620 630 640
670 680 690
pF1KE2 CLQGILSVIPLQLLAFHLAVLRGYDVDFPRNLAKSVTVE
:::::::::::::::::::::::::::::::::::::::
CCDS33 CLQGILSVIPLQLLAFHLAVLRGYDVDFPRNLAKSVTVE
650 660 670 680
>>CCDS43411.1 GFPT2 gene_id:9945|Hs109|chr5 (682 aa)
initn: 3641 init1: 2441 opt: 2443 Z-score: 3149.7 bits: 593.2 E(33420): 4.2e-169
Smith-Waterman score: 3611; 77.3% identity (92.4% similar) in 701 aa overlap (1-699:1-682)
10 20 30 40 50 60
pF1KE2 MCGIFAYLNYHVPRTRREILETLIKGLQRLEYRGYDSAGVGFDGGNDKDWEANACKIQLI
:::::::.::.:::::.::.::::::::::::::::::::..::.: :.. .:::.
CCDS43 MCGIFAYMNYRVPRTRKEIFETLIKGLQRLEYRGYDSAGVAIDGNNH---EVKERHIQLV
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 KKKGKVKALDEEVHKQQDMDLDIEFDVHLGIAHTRWATHGEPSPVNSHPQRSDKNNEFIV
::.:::::::::..::..::: .::..:.::::::::::: :: ::::::::::.:::.:
CCDS43 KKRGKVKALDEELYKQDSMDLKVEFETHFGIAHTRWATHGVPSAVNSHPQRSDKGNEFVV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 IHNGIITNYKDLKKFLESKGYDFESETDTETIAKLVKYMYDNRESQDTSFTTLVERVIQQ
::::::::::::.::::::::.:::::::::::::.::..::::..: .:.:::::::::
CCDS43 IHNGIITNYKDLRKFLESKGYEFESETDTETIAKLIKYVFDNRETEDITFSTLVERVIQQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 LEGAFALVFKSVHFPGQAVGTRRGSPLLIGVRSEHKLSTDHIPILYRTARTQIGSKFTRW
:::::::::::::.::.::.:::::::::::::..::::..::::::: .
CCDS43 LEGAFALVFKSVHYPGEAVATRRGSPLLIGVRSKYKLSTEQIPILYRTCTLE--------
180 190 200 210 220
250 260 270 280 290
pF1KE2 GSQGERGKDKKGSCN--LSRVDSTTCLFPVEEKAVEYYFASDASAVIEHTNRVIFLEDDD
. :. :. ..:.::..:: : .::::..:::::::.::::::::::::::
CCDS43 --------NVKNICKTRMKRLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVIFLEDDD
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE2 VAAVVDGRLSIHRIKRTAGDHPGRAVQTLQMELQQIMKGNFSSFMQKEIFEQPESVVNTM
.:::.::.:::::.::.:.: :.::.::::::::::::::::.::::::::::::: :::
CCDS43 IAAVADGKLSIHRVKRSASDDPSRAIQTLQMELQQIMKGNFSAFMQKEIFEQPESVFNTM
290 300 310 320 330 340
360 370 380 390 400 410
pF1KE2 RGRVNFDDYTVNLGGLKDHIKEIQRCRRLILIACGTSYHAGVATRQVLEELTELPVMVEL
::::::. :: :::::::.:::.::::::.:.:::::::.:::::::::::::::::::
CCDS43 RGRVNFETNTVLLGGLKDHLKEIRRCRRLIVIGCGTSYHAAVATRQVLEELTELPVMVEL
350 360 370 380 390 400
420 430 440 450 460 470
pF1KE2 ASDFLDRNTPVFRDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDC
:::::::::::::::::::.::::::::::..:::::.:::::::.::::::::::::::
CCDS43 ASDFLDRNTPVFRDDVCFFISQSGETADTLLALRYCKDRGALTVGVTNTVGSSISRETDC
410 420 430 440 450 460
480 490 500 510 520 530
pF1KE2 GVHINAGPEIGVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMLGLKRLPDLIKEV
::::::::::::::::::::::.:::::.::: .::::.:.::.::. ::. ::.:::::
CCDS43 GVHINAGPEIGVASTKAYTSQFISLVMFGLMMSEDRISLQNRRQEIIRGLRSLPELIKEV
470 480 490 500 510 520
540 550 560 570 580 590
pF1KE2 LSMDDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPL
::....:. :: ::: :.:.:.:::::.::::::::::::::::::::::::::::::::
CCDS43 LSLEEKIHDLALELYTQRSLLVMGRGYNYATCLEGALKIKEITYMHSEGILAGELKHGPL
530 540 550 560 570 580
600 610 620 630 640 650
pF1KE2 ALVDKLMPVIMIIMRDHTYAKCQNALQQVVARQGRPVVICDKEDTETIKNTKRTIKVPHS
::.:: :::::.::.: .::::::::::.::::::...:.:.:::. : . .::..::.
CCDS43 ALIDKQMPVIMVIMKDPCFAKCQNALQQVTARQGRPIILCSKDDTESSKFAYKTIELPHT
590 600 610 620 630 640
660 670 680 690
pF1KE2 VDCLQGILSVIPLQLLAFHLAVLRGYDVDFPRNLAKSVTVE
::::::::::::::::.::::::::::::::::::::::::
CCDS43 VDCLQGILSVIPLQLLSFHLAVLRGYDVDFPRNLAKSVTVE
650 660 670 680
699 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Jul 3 20:33:25 2020 done: Fri Jul 3 20:33:26 2020
Total Scan time: 1.530 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]