Result of FASTA (ccds) for
pF1KE2457
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2457, 1176 aa
1>>>pF1KE2457 1176 - 1176 aa - 1176 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0795+/-0.00109; mu= 19.8902+/- 0.066
mean_var=129.3208+/-24.665, 0's: 0 Z-trim(107.8): 75 B-trim: 0 in 0/51
Lambda= 0.112782
statistics sampled from 9742 (9792) to 9742 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.659), E-opt: 0.2 (0.301), width: 16
Scan time: 4.720
The best scores are: opt bits E(32554)
CCDS3310.1 MUC4 gene_id:4585|Hs108|chr3 (1176) 8301 1363.4 0
CCDS54700.1 MUC4 gene_id:4585|Hs108|chr3 (5412) 8100 1331.4 0
CCDS3311.1 MUC4 gene_id:4585|Hs108|chr3 (1125) 7763 1275.8 0
CCDS13824.1 SUSD2 gene_id:56241|Hs108|chr22 ( 822) 498 93.6 2.1e-18
>>CCDS3310.1 MUC4 gene_id:4585|Hs108|chr3 (1176 aa)
initn: 8301 init1: 8301 opt: 8301 Z-score: 7303.6 bits: 1363.4 E(32554): 0
Smith-Waterman score: 8301; 99.7% identity (100.0% similar) in 1176 aa overlap (1-1176:1-1176)
10 20 30 40 50 60
pF1KE2 MKGARWRRVPWVSLSCLCLCLLPHVVPGMTTPSLKTDGGRRTATSPPPTTSQTIISTIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MKGARWRRVPWVSLSCLCLCLLPHVVPGMTTPSLKTDGGRRTATSPPPTTSQTIISTIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 TAMHTRSTAAPIPILPERGVSLFPYGAGAGDLEFVRRTVDFTSPLFKPATGFPLGSSLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TAMHTRSTAAPIPILPERGVSLFPYGAGAGDLEFVRRTVDFTSPLFKPATGFPLGSSLRD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SLYFTDNGQIIFPESDYQIFSYPNPLPTGFTGRDPVALVAPFWDDADFSTGRGTTFYQEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SLYFTDNGQIIFPESDYQIFSYPNPLPTGFTGRDPVALVAPFWDDADFSTGRGTTFYQEY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 ETFYGEHSLLVQQAESWIRKITNNGGYKARWALKVTWVNAHAYPAQWTLGSNTYQAILST
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
CCDS33 ETFYGEHSLLVQQAESWIRKMTNNGGYKARWALKVTWVNAHAYPAQWTLGSNTYQAILST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 DGSRSYALFLYQSGGMQWDVAQRSGKPVLMGFSSGDGYFENSPLMSQPVWERYRPDRFLN
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
CCDS33 DGSRSYALFLYQSGGMQWDVAQRSGNPVLMGFSSGDGYFENSPLMSQPVWERYRPDRFLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 SNSGLQGLQFYRLHREERPNYRLECLQWLKSQPRWPSWGWNQVSCPCSWQQGRRDLRFQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SNSGLQGLQFYRLHREERPNYRLECLQWLKSQPRWPSWGWNQVSCPCSWQQGRRDLRFQP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 VSIGRWGLGSRQLCSFTSWRGGVCCSYGPWGEFREGWHVQRPWQLAQELEPQSWCCRWND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VSIGRWGLGSRQLCSFTSWRGGVCCSYGPWGEFREGWHVQRPWQLAQELEPQSWCCRWND
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 KPYLCALYQQRRPHVGCATYRPPQPAWMFGDPHITTLDGVSYTFNGLGDFLLVGAQDGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KPYLCALYQQRRPHVGCATYRPPQPAWMFGDPHITTLDGVSYTFNGLGDFLLVGAQDGNS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 SFLLQGRTAQTGSAQATNFIAFAAQYRSSSLGPVTVQWLLEPHDAIRVLLDNQTVTFQPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SFLLQGRTAQTGSAQATNFIAFAAQYRSSSLGPVTVQWLLEPHDAIRVLLDNQTVTFQPD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 HEDGGGQETFNATGVLLSRNGSEVSASFDGWATVSVIALSNILHSSASLPPEYQNRTEGL
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
CCDS33 HEDGGGQETFNATGVLLSRNGSEVSASFDGWATVSVIALSNILHASASLPPEYQNRTEGL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 LGVWNNNPEDDFRMPNGSTIPPGSPEEMLFHFGMTWQINGTGLLGKRNDQLPSNFTPVFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LGVWNNNPEDDFRMPNGSTIPPGSPEEMLFHFGMTWQINGTGLLGKRNDQLPSNFTPVFY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 SQLQKNSSWAEHLISNCDGDSSCIYDTLALRNASIGLHTREVSKNYEQANATLNQYPPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SQLQKNSSWAEHLISNCDGDSSCIYDTLALRNASIGLHTREVSKNYEQANATLNQYPPSI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 NGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCTDLELFENGTLLWTPKSLEPFTLEILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCTDLELFENGTLLWTPKSLEPFTLEILA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 RSAKIGLASALQPRTVVCHCNAESQCLYNQTSRVGNSSLEVAGCKCDGGTFGRYCEGSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RSAKIGLASALQPRTVVCHCNAESQCLYNQTSRVGNSSLEVAGCKCDGGTFGRYCEGSED
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE2 ACEEPCFPSVHCVPGKGCEACPPNLTGDGRHCAALGSSFLCQNQSCPVNYCYNQGHCYIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ACEEPCFPSVHCVPGKGCEACPPNLTGDGRHCAALGSSFLCQNQSCPVNYCYNQGHCYIS
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE2 QTLGCQPMCTCPPAFTDSRCFLAGNNFSPTVNLELPLRVIQLLLSEEENASMAEVNASVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QTLGCQPMCTCPPAFTDSRCFLAGNNFSPTVNLELPLRVIQLLLSEEENASMAEVNASVA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE2 YRLGTLDMRAFLRNSQVERIDSAAPASGSPIQHWMVISEFQYRPRGPVIDFLNNQLLAAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 YRLGTLDMRAFLRNSQVERIDSAAPASGSPIQHWMVISEFQYRPRGPVIDFLNNQLLAAV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE2 VEAFLYHVPRRSEEPRNDVVFQPISGEDVRDVTALNVSTLKAYFRCDGYKGYDLVYSPQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VEAFLYHVPRRSEEPRNDVVFQPISGEDVRDVTALNVSTLKAYFRCDGYKGYDLVYSPQS
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE2 GFTCVSPCSRGYCDHGGQCQHLPSGPRCSCVSFSIYTAWGEHCEHLSMKLDAFFGIFFGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GFTCVSPCSRGYCDHGGQCQHLPSGPRCSCVSFSIYTAWGEHCEHLSMKLDAFFGIFFGA
1090 1100 1110 1120 1130 1140
1150 1160 1170
pF1KE2 LGGLLLLGVGTFVVLRFWGCSGARFSYFLNSAEALP
::::::::::::::::::::::::::::::::::::
CCDS33 LGGLLLLGVGTFVVLRFWGCSGARFSYFLNSAEALP
1150 1160 1170
>>CCDS54700.1 MUC4 gene_id:4585|Hs108|chr3 (5412 aa)
initn: 8100 init1: 8100 opt: 8100 Z-score: 7118.7 bits: 1331.4 E(32554): 0
Smith-Waterman score: 8100; 99.7% identity (100.0% similar) in 1150 aa overlap (27-1176:4263-5412)
10 20 30 40 50
pF1KE2 MKGARWRRVPWVSLSCLCLCLLPHVVPGMTTPSLKTDGGRRTATSPPPTTSQTIIS
::::::::::::::::::::::::::::::
CCDS54 VSTGHATPLAVSSATSASTVSSDSPLKMETPGMTTPSLKTDGGRRTATSPPPTTSQTIIS
4240 4250 4260 4270 4280 4290
60 70 80 90 100 110
pF1KE2 TIPSTAMHTRSTAAPIPILPERGVSLFPYGAGAGDLEFVRRTVDFTSPLFKPATGFPLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TIPSTAMHTRSTAAPIPILPERGVSLFPYGAGAGDLEFVRRTVDFTSPLFKPATGFPLGS
4300 4310 4320 4330 4340 4350
120 130 140 150 160 170
pF1KE2 SLRDSLYFTDNGQIIFPESDYQIFSYPNPLPTGFTGRDPVALVAPFWDDADFSTGRGTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SLRDSLYFTDNGQIIFPESDYQIFSYPNPLPTGFTGRDPVALVAPFWDDADFSTGRGTTF
4360 4370 4380 4390 4400 4410
180 190 200 210 220 230
pF1KE2 YQEYETFYGEHSLLVQQAESWIRKITNNGGYKARWALKVTWVNAHAYPAQWTLGSNTYQA
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
CCDS54 YQEYETFYGEHSLLVQQAESWIRKMTNNGGYKARWALKVTWVNAHAYPAQWTLGSNTYQA
4420 4430 4440 4450 4460 4470
240 250 260 270 280 290
pF1KE2 ILSTDGSRSYALFLYQSGGMQWDVAQRSGKPVLMGFSSGDGYFENSPLMSQPVWERYRPD
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
CCDS54 ILSTDGSRSYALFLYQSGGMQWDVAQRSGNPVLMGFSSGDGYFENSPLMSQPVWERYRPD
4480 4490 4500 4510 4520 4530
300 310 320 330 340 350
pF1KE2 RFLNSNSGLQGLQFYRLHREERPNYRLECLQWLKSQPRWPSWGWNQVSCPCSWQQGRRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RFLNSNSGLQGLQFYRLHREERPNYRLECLQWLKSQPRWPSWGWNQVSCPCSWQQGRRDL
4540 4550 4560 4570 4580 4590
360 370 380 390 400 410
pF1KE2 RFQPVSIGRWGLGSRQLCSFTSWRGGVCCSYGPWGEFREGWHVQRPWQLAQELEPQSWCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RFQPVSIGRWGLGSRQLCSFTSWRGGVCCSYGPWGEFREGWHVQRPWQLAQELEPQSWCC
4600 4610 4620 4630 4640 4650
420 430 440 450 460 470
pF1KE2 RWNDKPYLCALYQQRRPHVGCATYRPPQPAWMFGDPHITTLDGVSYTFNGLGDFLLVGAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RWNDKPYLCALYQQRRPHVGCATYRPPQPAWMFGDPHITTLDGVSYTFNGLGDFLLVGAQ
4660 4670 4680 4690 4700 4710
480 490 500 510 520 530
pF1KE2 DGNSSFLLQGRTAQTGSAQATNFIAFAAQYRSSSLGPVTVQWLLEPHDAIRVLLDNQTVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DGNSSFLLQGRTAQTGSAQATNFIAFAAQYRSSSLGPVTVQWLLEPHDAIRVLLDNQTVT
4720 4730 4740 4750 4760 4770
540 550 560 570 580 590
pF1KE2 FQPDHEDGGGQETFNATGVLLSRNGSEVSASFDGWATVSVIALSNILHSSASLPPEYQNR
::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
CCDS54 FQPDHEDGGGQETFNATGVLLSRNGSEVSASFDGWATVSVIALSNILHASASLPPEYQNR
4780 4790 4800 4810 4820 4830
600 610 620 630 640 650
pF1KE2 TEGLLGVWNNNPEDDFRMPNGSTIPPGSPEEMLFHFGMTWQINGTGLLGKRNDQLPSNFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TEGLLGVWNNNPEDDFRMPNGSTIPPGSPEEMLFHFGMTWQINGTGLLGKRNDQLPSNFT
4840 4850 4860 4870 4880 4890
660 670 680 690 700 710
pF1KE2 PVFYSQLQKNSSWAEHLISNCDGDSSCIYDTLALRNASIGLHTREVSKNYEQANATLNQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PVFYSQLQKNSSWAEHLISNCDGDSSCIYDTLALRNASIGLHTREVSKNYEQANATLNQY
4900 4910 4920 4930 4940 4950
720 730 740 750 760 770
pF1KE2 PPSINGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCTDLELFENGTLLWTPKSLEPFTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PPSINGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCTDLELFENGTLLWTPKSLEPFTL
4960 4970 4980 4990 5000 5010
780 790 800 810 820 830
pF1KE2 EILARSAKIGLASALQPRTVVCHCNAESQCLYNQTSRVGNSSLEVAGCKCDGGTFGRYCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EILARSAKIGLASALQPRTVVCHCNAESQCLYNQTSRVGNSSLEVAGCKCDGGTFGRYCE
5020 5030 5040 5050 5060 5070
840 850 860 870 880 890
pF1KE2 GSEDACEEPCFPSVHCVPGKGCEACPPNLTGDGRHCAALGSSFLCQNQSCPVNYCYNQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GSEDACEEPCFPSVHCVPGKGCEACPPNLTGDGRHCAALGSSFLCQNQSCPVNYCYNQGH
5080 5090 5100 5110 5120 5130
900 910 920 930 940 950
pF1KE2 CYISQTLGCQPMCTCPPAFTDSRCFLAGNNFSPTVNLELPLRVIQLLLSEEENASMAEVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 CYISQTLGCQPMCTCPPAFTDSRCFLAGNNFSPTVNLELPLRVIQLLLSEEENASMAEVN
5140 5150 5160 5170 5180 5190
960 970 980 990 1000 1010
pF1KE2 ASVAYRLGTLDMRAFLRNSQVERIDSAAPASGSPIQHWMVISEFQYRPRGPVIDFLNNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ASVAYRLGTLDMRAFLRNSQVERIDSAAPASGSPIQHWMVISEFQYRPRGPVIDFLNNQL
5200 5210 5220 5230 5240 5250
1020 1030 1040 1050 1060 1070
pF1KE2 LAAVVEAFLYHVPRRSEEPRNDVVFQPISGEDVRDVTALNVSTLKAYFRCDGYKGYDLVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LAAVVEAFLYHVPRRSEEPRNDVVFQPISGEDVRDVTALNVSTLKAYFRCDGYKGYDLVY
5260 5270 5280 5290 5300 5310
1080 1090 1100 1110 1120 1130
pF1KE2 SPQSGFTCVSPCSRGYCDHGGQCQHLPSGPRCSCVSFSIYTAWGEHCEHLSMKLDAFFGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SPQSGFTCVSPCSRGYCDHGGQCQHLPSGPRCSCVSFSIYTAWGEHCEHLSMKLDAFFGI
5320 5330 5340 5350 5360 5370
1140 1150 1160 1170
pF1KE2 FFGALGGLLLLGVGTFVVLRFWGCSGARFSYFLNSAEALP
::::::::::::::::::::::::::::::::::::::::
CCDS54 FFGALGGLLLLGVGTFVVLRFWGCSGARFSYFLNSAEALP
5380 5390 5400 5410
>>CCDS3311.1 MUC4 gene_id:4585|Hs108|chr3 (1125 aa)
initn: 7762 init1: 7762 opt: 7763 Z-score: 6830.8 bits: 1275.8 E(32554): 0
Smith-Waterman score: 7861; 95.4% identity (95.7% similar) in 1176 aa overlap (1-1176:1-1125)
10 20 30 40 50 60
pF1KE2 MKGARWRRVPWVSLSCLCLCLLPHVVPGMTTPSLKTDGGRRTATSPPPTTSQTIISTIPS
::::::::::::::::::::::::::::
CCDS33 MKGARWRRVPWVSLSCLCLCLLPHVVPG--------------------------------
10 20
70 80 90 100 110 120
pF1KE2 TAMHTRSTAAPIPILPERGVSLFPYGAGAGDLEFVRRTVDFTSPLFKPATGFPLGSSLRD
:::::::::::::::::::::::::::::::::::::::::
CCDS33 -------------------VSLFPYGAGAGDLEFVRRTVDFTSPLFKPATGFPLGSSLRD
30 40 50 60
130 140 150 160 170 180
pF1KE2 SLYFTDNGQIIFPESDYQIFSYPNPLPTGFTGRDPVALVAPFWDDADFSTGRGTTFYQEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SLYFTDNGQIIFPESDYQIFSYPNPLPTGFTGRDPVALVAPFWDDADFSTGRGTTFYQEY
70 80 90 100 110 120
190 200 210 220 230 240
pF1KE2 ETFYGEHSLLVQQAESWIRKITNNGGYKARWALKVTWVNAHAYPAQWTLGSNTYQAILST
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
CCDS33 ETFYGEHSLLVQQAESWIRKMTNNGGYKARWALKVTWVNAHAYPAQWTLGSNTYQAILST
130 140 150 160 170 180
250 260 270 280 290 300
pF1KE2 DGSRSYALFLYQSGGMQWDVAQRSGKPVLMGFSSGDGYFENSPLMSQPVWERYRPDRFLN
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
CCDS33 DGSRSYALFLYQSGGMQWDVAQRSGNPVLMGFSSGDGYFENSPLMSQPVWERYRPDRFLN
190 200 210 220 230 240
310 320 330 340 350 360
pF1KE2 SNSGLQGLQFYRLHREERPNYRLECLQWLKSQPRWPSWGWNQVSCPCSWQQGRRDLRFQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SNSGLQGLQFYRLHREERPNYRLECLQWLKSQPRWPSWGWNQVSCPCSWQQGRRDLRFQP
250 260 270 280 290 300
370 380 390 400 410 420
pF1KE2 VSIGRWGLGSRQLCSFTSWRGGVCCSYGPWGEFREGWHVQRPWQLAQELEPQSWCCRWND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VSIGRWGLGSRQLCSFTSWRGGVCCSYGPWGEFREGWHVQRPWQLAQELEPQSWCCRWND
310 320 330 340 350 360
430 440 450 460 470 480
pF1KE2 KPYLCALYQQRRPHVGCATYRPPQPAWMFGDPHITTLDGVSYTFNGLGDFLLVGAQDGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KPYLCALYQQRRPHVGCATYRPPQPAWMFGDPHITTLDGVSYTFNGLGDFLLVGAQDGNS
370 380 390 400 410 420
490 500 510 520 530 540
pF1KE2 SFLLQGRTAQTGSAQATNFIAFAAQYRSSSLGPVTVQWLLEPHDAIRVLLDNQTVTFQPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SFLLQGRTAQTGSAQATNFIAFAAQYRSSSLGPVTVQWLLEPHDAIRVLLDNQTVTFQPD
430 440 450 460 470 480
550 560 570 580 590 600
pF1KE2 HEDGGGQETFNATGVLLSRNGSEVSASFDGWATVSVIALSNILHSSASLPPEYQNRTEGL
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
CCDS33 HEDGGGQETFNATGVLLSRNGSEVSASFDGWATVSVIALSNILHASASLPPEYQNRTEGL
490 500 510 520 530 540
610 620 630 640 650 660
pF1KE2 LGVWNNNPEDDFRMPNGSTIPPGSPEEMLFHFGMTWQINGTGLLGKRNDQLPSNFTPVFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LGVWNNNPEDDFRMPNGSTIPPGSPEEMLFHFGMTWQINGTGLLGKRNDQLPSNFTPVFY
550 560 570 580 590 600
670 680 690 700 710 720
pF1KE2 SQLQKNSSWAEHLISNCDGDSSCIYDTLALRNASIGLHTREVSKNYEQANATLNQYPPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SQLQKNSSWAEHLISNCDGDSSCIYDTLALRNASIGLHTREVSKNYEQANATLNQYPPSI
610 620 630 640 650 660
730 740 750 760 770 780
pF1KE2 NGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCTDLELFENGTLLWTPKSLEPFTLEILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCTDLELFENGTLLWTPKSLEPFTLEILA
670 680 690 700 710 720
790 800 810 820 830 840
pF1KE2 RSAKIGLASALQPRTVVCHCNAESQCLYNQTSRVGNSSLEVAGCKCDGGTFGRYCEGSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RSAKIGLASALQPRTVVCHCNAESQCLYNQTSRVGNSSLEVAGCKCDGGTFGRYCEGSED
730 740 750 760 770 780
850 860 870 880 890 900
pF1KE2 ACEEPCFPSVHCVPGKGCEACPPNLTGDGRHCAALGSSFLCQNQSCPVNYCYNQGHCYIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ACEEPCFPSVHCVPGKGCEACPPNLTGDGRHCAALGSSFLCQNQSCPVNYCYNQGHCYIS
790 800 810 820 830 840
910 920 930 940 950 960
pF1KE2 QTLGCQPMCTCPPAFTDSRCFLAGNNFSPTVNLELPLRVIQLLLSEEENASMAEVNASVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QTLGCQPMCTCPPAFTDSRCFLAGNNFSPTVNLELPLRVIQLLLSEEENASMAEVNASVA
850 860 870 880 890 900
970 980 990 1000 1010 1020
pF1KE2 YRLGTLDMRAFLRNSQVERIDSAAPASGSPIQHWMVISEFQYRPRGPVIDFLNNQLLAAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 YRLGTLDMRAFLRNSQVERIDSAAPASGSPIQHWMVISEFQYRPRGPVIDFLNNQLLAAV
910 920 930 940 950 960
1030 1040 1050 1060 1070 1080
pF1KE2 VEAFLYHVPRRSEEPRNDVVFQPISGEDVRDVTALNVSTLKAYFRCDGYKGYDLVYSPQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VEAFLYHVPRRSEEPRNDVVFQPISGEDVRDVTALNVSTLKAYFRCDGYKGYDLVYSPQS
970 980 990 1000 1010 1020
1090 1100 1110 1120 1130 1140
pF1KE2 GFTCVSPCSRGYCDHGGQCQHLPSGPRCSCVSFSIYTAWGEHCEHLSMKLDAFFGIFFGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GFTCVSPCSRGYCDHGGQCQHLPSGPRCSCVSFSIYTAWGEHCEHLSMKLDAFFGIFFGA
1030 1040 1050 1060 1070 1080
1150 1160 1170
pF1KE2 LGGLLLLGVGTFVVLRFWGCSGARFSYFLNSAEALP
::::::::::::::::::::::::::::::::::::
CCDS33 LGGLLLLGVGTFVVLRFWGCSGARFSYFLNSAEALP
1090 1100 1110 1120
>>CCDS13824.1 SUSD2 gene_id:56241|Hs108|chr22 (822 aa)
initn: 411 init1: 205 opt: 498 Z-score: 443.9 bits: 93.6 E(32554): 2.1e-18
Smith-Waterman score: 545; 25.1% identity (48.2% similar) in 809 aa overlap (9-742:6-745)
10 20 30 40 50 60
pF1KE2 MKGARWRRVPWVSLSCLCLCLLPHVVPGMTTPSLKTDGGRRTATSPPPTTSQTIISTIPS
.:: .: : : : :: :. . .. . : : . : . : : . .
CCDS13 MKPALLPW-ALLLLATALGPG--PGPTADAQESCSMRCGALDGPCSCHPTC-SGLGT
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 TAMHTRSTAAPIPILPERGVSLFPYGAGAGDLEFVRRTVDFTSPLFKPATGFPLGSSLRD
. :. . ::: : . : .:: : ..:: : . ..:
CCDS13 CCLDFRDFC--LEILPYSGSMM-------GGKDFVVRHFKMSSP-----TDASVICRFKD
60 70 80 90
130 140 150 160 170 180
pF1KE2 SLYFTDNGQIIFPESDYQIFSYPNPLPTGFTGRDPVALVAPFWDDADFSTGRGTTFYQEY
:. :.. .:. :. .:: .:: : .. : : .: .
CCDS13 SIQTL--GHV---DSSGQVHCV-SPL-LYESGRIPFTV----------SLDNGHSFPRAG
100 110 120 130 140
190 200 210 220 230 240
pF1KE2 ETFYGEHSLLVQQAESWIRKITNNGGYKARWALKVTWVNAHAYPAQWTLGSNTYQAILST
:. . : :.. :. ...: ..:: : .. : . : :.:
CCDS13 -TWLAVHPNKVSMMEK--SELVN----ETRWQYYGTANTSGNLSLTWHVKSLPTQTI---
150 160 170 180 190
250 260 270 280 290
pF1KE2 DGSRSYALFLYQSGGM----QWDVAQRSGKPVLMGFSSGDGYFENSPLMSQPVWERYRPD
. :. :. :: .: . : : ..: : .: . : ..:.:
CCDS13 ----TIELWGYEETGMPYSQEWTAKWSYLYP-LATHIPNSGSFTFTPKPAPPSYQRWRVG
200 210 220 230 240
300 310 320 330
pF1KE2 --RFLNSNS--GLQGLQF---------YRLHREERPN----YRLECLQWLKSQPRWPSWG
:...:.. : . .: ..: . : . : .: : . . . :..
CCDS13 ALRIIDSKNYAGQKDVQALWTNDHALAWHLSDDFREDPVAWARTQCQAWEELEDQLPNFL
250 260 270 280 290 300
340 350 360 370
pF1KE2 WNQVSCPCSWQQGRRDL-RF----------------QPVSI-------GRWGLGSRQLCS
. .:::. :.: : :: .: .. . :: : :
CCDS13 EELPDCPCTLTQARADSGRFFTDYGCDMEQGSVCTYHPGAVHCVRSVQASLRYGSGQQCC
310 320 330 340 350 360
380 390 400 410 420
pF1KE2 FTS---------WRGGVCCSYG-PWGE--FREGWHVQRPWQLAQELEPQSWCCRWNDKPY
.:. :: . : :: :: .: . .. .:: :
CCDS13 YTADGTQLLTADSSGGSTPDRGHDWGAPPFRTPPRVPSMSHWLYDVLSFYYCCLWAPD--
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 LCALYQQRRPHVGCATYRPPQPAWMFGDPHITTLDGVSYTFNGLGDFLLVGAQDGNSSFL
: :.:::: : .::::. : :::::..:.::...:::: :...:. : . ...
CCDS13 -CPRYMQRRPSNDCRNYRPPRLASAFGDPHFVTFDGTNFTFNGRGEYVLLEA--ALTDLR
430 440 450 460 470 480
490 500 510 520 530
pF1KE2 LQGRTAQTGS------AQATNFIAFAAQYRSSSLGPVTVQWLLEPHDAIRVLLDNQTVTF
.:.: :: :. ...:.. : :.: .:.. : :. : . ...:::......:
CCDS13 VQAR-AQPGTMSNGTETRGTGLTAVAVQEGNSDV--VEVR-LANRTGGLEVLLNQEVLSF
490 500 510 520 530
540 550 560 570 580 590
pF1KE2 QPDHEDGGGQETFNATGVLLS-RNGSEVSASFDGWATVSVIALSNILHSSASLPPEYQNR
: .. :..:: :..:: . . : . : . . .: :. :: .. ..
CCDS13 TE-------QSWMDLKGMFLSVAAGDRVSIMLASGAGLEVSVQGPFLSVSVLLPEKFLTH
540 550 560 570 580 590
600 610 620 630 640 650
pF1KE2 TEGLLGVWNNNPEDDFRMPNGSTIPPGSPEEMLFHFGMTWQI-NGTGLLGKRNDQLPSNF
:.::::. ::.: ::: . .: ..:::. . :: :: .: . :...:: . : ::
CCDS13 THGLLGTLNNDPTDDFTLHSGRVLPPGTSPQELFLFGANWTVHNASSLLTYDSWFLVHNF
600 610 620 630 640 650
660 670 680 690 700
pF1KE2 T----------PVFYSQLQKNSSWAEHLISNCDGDSSCIYDTLALRNASIGLHTREVSKN
:.: :. : : :.. . : : : .:. : . : : :: . .
CCDS13 LYQPKHDPTFEPLFPSETTLNPSLAQEAAKLCGDDHFCNFDVAATGSLSTGTATRVAHQL
660 670 680 690 700 710
710 720 730 740 750 760
pF1KE2 YEQANATLNQYPPSINGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCTDLELFENGTLL
... .:. : .. : . .:: .: ...
CCDS13 HQRRMQSLQ---PVVSCGWLAPPPNGQKEGNRYLAGSTIYFHCDNGYSLAGAETSTCQAD
720 730 740 750 760
770 780 790 800 810 820
pF1KE2 WTPKSLEPFTLEILARSAKIGLASALQPRTVVCHCNAESQCLYNQTSRVGNSSLEVAGCK
CCDS13 GTWSSPTPKCQPGRSYAVLLGIIFGGLAVVAAVALVYVLLRRRKGNTHVWGAQP
770 780 790 800 810 820
1176 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 20:21:13 2016 done: Mon Nov 7 20:21:14 2016
Total Scan time: 4.720 Total Display time: 0.190
Function used was FASTA [36.3.4 Apr, 2011]