FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2496, 655 aa 1>>>pF1KE2496 655 - 655 aa - 655 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.8511+/-0.000921; mu= 9.1049+/- 0.055 mean_var=178.7728+/-36.824, 0's: 0 Z-trim(111.3): 33 B-trim: 101 in 1/52 Lambda= 0.095923 statistics sampled from 12231 (12241) to 12231 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.376), width: 16 Scan time: 3.340 The best scores are: opt bits E(32554) CCDS10867.1 SMPD3 gene_id:55512|Hs108|chr16 ( 655) 4504 635.9 5.1e-182 >>CCDS10867.1 SMPD3 gene_id:55512|Hs108|chr16 (655 aa) initn: 4504 init1: 4504 opt: 4504 Z-score: 3381.3 bits: 635.9 E(32554): 5.1e-182 Smith-Waterman score: 4504; 100.0% identity (100.0% similar) in 655 aa overlap (1-655:1-655) 10 20 30 40 50 60 pF1KE2 MVLYTTPFPNSCLSALHCVSWALIFPCYWLVDRLAASFIPTTYEKRQRADDPCCLQLLCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MVLYTTPFPNSCLSALHCVSWALIFPCYWLVDRLAASFIPTTYEKRQRADDPCCLQLLCT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ALFTPIYLALLVASLPFAFLGFLFWSPLQSARRPYIYSRLEDKGLAGGAALLSEWKGTGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 ALFTPIYLALLVASLPFAFLGFLFWSPLQSARRPYIYSRLEDKGLAGGAALLSEWKGTGP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 GKSFCFATANVCLLPDSLARVNNLFNTQARAKEIGQRIRNGAARPQIKIYIDSPTNTSIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GKSFCFATANVCLLPDSLARVNNLFNTQARAKEIGQRIRNGAARPQIKIYIDSPTNTSIS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 AASFSSLVSPQGGDGVARAVPGSIKRTASVEYKGDGGRHPGDEAANGPASGDPVDSSSPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 AASFSSLVSPQGGDGVARAVPGSIKRTASVEYKGDGGRHPGDEAANGPASGDPVDSSSPE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 DACIVRIGGEEGGRPPEADDPVPGGQARNGAGGGPRGQTPNHNQQDGDSGSLGSPSASRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 DACIVRIGGEEGGRPPEADDPVPGGQARNGAGGGPRGQTPNHNQQDGDSGSLGSPSASRE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 SLVKGRAGPDTSASGEPGANSKLLYKASVVKKAAARRRRHPDEAFDHEVSAFFPANLDFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 SLVKGRAGPDTSASGEPGANSKLLYKASVVKKAAARRRRHPDEAFDHEVSAFFPANLDFL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 CLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPIMDVAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 CLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPIMDVAY 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 HCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPQEDSAIRCGQLDLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 HCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPQEDSAIRCGQLDLLQ 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 DWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFTHYRDPCRLGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 DWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFTHYRDPCRLGP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 GEEKPWAIGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSSGQKGRKELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GEEKPWAIGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSSGQKGRKELLK 550 560 570 580 590 600 610 620 630 640 650 pF1KE2 GNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQLSGLTDHLPVAMRLMVSSGEEEA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQLSGLTDHLPVAMRLMVSSGEEEA 610 620 630 640 650 655 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:04:28 2016 done: Mon Nov 7 21:04:29 2016 Total Scan time: 3.340 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]