Result of FASTA (omim) for
pF1KE2553
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2553, 258 aa
1>>>pF1KE2553 258 - 258 aa - 258 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7706+/-0.000311; mu= 13.8201+/- 0.020
mean_var=92.2126+/-18.649, 0's: 0 Z-trim(118.6): 383 B-trim: 0 in 0/54
Lambda= 0.133561
statistics sampled from 31412 (31806) to 31412 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.742), E-opt: 0.2 (0.373), width: 16
Scan time: 7.190
The best scores are: opt bits E(85289)
XP_011528541 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1609 319.7 6.1e-87
XP_005261712 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1609 319.7 6.1e-87
XP_006724332 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1609 319.7 6.1e-87
XP_011528542 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1609 319.7 6.1e-87
XP_011528543 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1609 319.7 6.1e-87
XP_011528544 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1609 319.7 6.1e-87
XP_006724333 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1609 319.7 6.1e-87
XP_005261713 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1609 319.7 6.1e-87
XP_011528545 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1609 319.7 6.1e-87
NP_001001928 (OMIM: 170998) peroxisome proliferato ( 468) 1609 319.7 6.1e-87
NP_005027 (OMIM: 170998) peroxisome proliferator-a ( 468) 1609 319.7 6.1e-87
NP_803184 (OMIM: 600409) peroxisome proliferator-a ( 361) 760 156.0 8.7e-38
XP_016866464 (OMIM: 600409) PREDICTED: peroxisome ( 365) 760 156.0 8.8e-38
XP_016866462 (OMIM: 600409) PREDICTED: peroxisome ( 441) 760 156.1 1e-37
XP_006715186 (OMIM: 600409) PREDICTED: peroxisome ( 441) 760 156.1 1e-37
XP_006715183 (OMIM: 600409) PREDICTED: peroxisome ( 441) 760 156.1 1e-37
XP_016866463 (OMIM: 600409) PREDICTED: peroxisome ( 441) 760 156.1 1e-37
XP_011513012 (OMIM: 600409) PREDICTED: peroxisome ( 441) 760 156.1 1e-37
XP_016866460 (OMIM: 600409) PREDICTED: peroxisome ( 441) 760 156.1 1e-37
XP_005249250 (OMIM: 600409) PREDICTED: peroxisome ( 441) 760 156.1 1e-37
NP_001165289 (OMIM: 600409) peroxisome proliferato ( 441) 760 156.1 1e-37
XP_016866461 (OMIM: 600409) PREDICTED: peroxisome ( 441) 760 156.1 1e-37
XP_011513009 (OMIM: 600409) PREDICTED: peroxisome ( 441) 760 156.1 1e-37
NP_006229 (OMIM: 600409) peroxisome proliferator-a ( 441) 760 156.1 1e-37
XP_011513011 (OMIM: 600409) PREDICTED: peroxisome ( 441) 760 156.1 1e-37
NP_001165290 (OMIM: 600409) peroxisome proliferato ( 402) 757 155.5 1.4e-37
NP_001317544 (OMIM: 125853,601487,601665,604367,60 ( 250) 727 149.5 5.4e-36
XP_011532146 (OMIM: 125853,601487,601665,604367,60 ( 250) 727 149.5 5.4e-36
XP_011532145 (OMIM: 125853,601487,601665,604367,60 ( 278) 727 149.5 5.9e-36
XP_011532144 (OMIM: 125853,601487,601665,604367,60 ( 445) 722 148.7 1.6e-35
XP_011532143 (OMIM: 125853,601487,601665,604367,60 ( 477) 722 148.8 1.7e-35
NP_619726 (OMIM: 125853,601487,601665,604367,60933 ( 477) 722 148.8 1.7e-35
NP_005028 (OMIM: 125853,601487,601665,604367,60933 ( 477) 722 148.8 1.7e-35
NP_619725 (OMIM: 125853,601487,601665,604367,60933 ( 477) 722 148.8 1.7e-35
NP_056953 (OMIM: 125853,601487,601665,604367,60933 ( 505) 722 148.8 1.8e-35
XP_006713514 (OMIM: 602304) PREDICTED: nuclear rec ( 448) 445 95.4 1.9e-19
NP_001138897 (OMIM: 602304) nuclear receptor subfa ( 504) 445 95.4 2.1e-19
NP_068370 (OMIM: 602408) nuclear receptor subfamil ( 614) 446 95.7 2.1e-19
NP_005117 (OMIM: 602304) nuclear receptor subfamil ( 579) 445 95.5 2.3e-19
XP_011528547 (OMIM: 170998) PREDICTED: peroxisome ( 334) 429 92.2 1.3e-18
XP_016884328 (OMIM: 170998) PREDICTED: peroxisome ( 334) 429 92.2 1.3e-18
XP_011528546 (OMIM: 170998) PREDICTED: peroxisome ( 334) 429 92.2 1.3e-18
NP_001278849 (OMIM: 180245) retinoic acid receptor ( 435) 402 87.1 5.9e-17
NP_002948 (OMIM: 180245) retinoic acid receptor RX ( 462) 402 87.1 6.2e-17
NP_001277145 (OMIM: 180220,615524) retinoic acid r ( 455) 397 86.1 1.2e-16
NP_008845 (OMIM: 601972) nuclear receptor ROR-beta ( 459) 397 86.1 1.2e-16
NP_008848 (OMIM: 180247) retinoic acid receptor RX ( 463) 388 84.4 4e-16
NP_599022 (OMIM: 600825) nuclear receptor ROR-alph ( 556) 389 84.7 4e-16
NP_001277229 (OMIM: 180220,615524) retinoic acid r ( 405) 387 84.2 4.1e-16
NP_001278850 (OMIM: 180245) retinoic acid receptor ( 365) 385 83.7 5e-16
>>XP_011528541 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1681.9 bits: 319.7 E(85289): 6.1e-87
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPVGV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250
pF1KE2 CGCSGFSWQHGTSVVEDD
XP_011 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
>>XP_005261712 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1681.9 bits: 319.7 E(85289): 6.1e-87
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPVGV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250
pF1KE2 CGCSGFSWQHGTSVVEDD
XP_005 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
>>XP_006724332 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1681.9 bits: 319.7 E(85289): 6.1e-87
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPVGV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250
pF1KE2 CGCSGFSWQHGTSVVEDD
XP_006 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
>>XP_011528542 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1681.9 bits: 319.7 E(85289): 6.1e-87
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPVGV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250
pF1KE2 CGCSGFSWQHGTSVVEDD
XP_011 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
>>XP_011528543 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1681.9 bits: 319.7 E(85289): 6.1e-87
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPVGV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250
pF1KE2 CGCSGFSWQHGTSVVEDD
XP_011 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
>>XP_011528544 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1681.9 bits: 319.7 E(85289): 6.1e-87
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPVGV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250
pF1KE2 CGCSGFSWQHGTSVVEDD
XP_011 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
>>XP_006724333 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1681.9 bits: 319.7 E(85289): 6.1e-87
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPVGV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250
pF1KE2 CGCSGFSWQHGTSVVEDD
XP_006 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
>>XP_005261713 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1681.9 bits: 319.7 E(85289): 6.1e-87
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPVGV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250
pF1KE2 CGCSGFSWQHGTSVVEDD
XP_005 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
>>XP_011528545 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1681.9 bits: 319.7 E(85289): 6.1e-87
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPVGV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250
pF1KE2 CGCSGFSWQHGTSVVEDD
XP_011 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
>>NP_001001928 (OMIM: 170998) peroxisome proliferator-ac (468 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1681.9 bits: 319.7 E(85289): 6.1e-87
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPVGV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250
pF1KE2 CGCSGFSWQHGTSVVEDD
NP_001 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
258 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 10:48:13 2016 done: Tue Nov 8 10:48:14 2016
Total Scan time: 7.190 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]