Result of FASTA (omim) for
pF1KE2577
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2577, 323 aa
1>>>pF1KE2577 323 - 323 aa - 323 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3831+/-0.000326; mu= 11.6037+/- 0.020
mean_var=109.0543+/-21.606, 0's: 0 Z-trim(118.6): 392 B-trim: 11 in 1/58
Lambda= 0.122815
statistics sampled from 31393 (31791) to 31393 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.732), E-opt: 0.2 (0.373), width: 16
Scan time: 7.510
The best scores are: opt bits E(85289)
NP_001258806 (OMIM: 601663) estrogen receptor beta ( 439) 2230 405.6 1e-112
NP_001258805 (OMIM: 601663) estrogen receptor beta ( 474) 2223 404.3 2.5e-112
NP_001201831 (OMIM: 601663) estrogen receptor beta ( 481) 2223 404.3 2.5e-112
NP_001035365 (OMIM: 601663) estrogen receptor beta ( 495) 2223 404.4 2.6e-112
XP_016876573 (OMIM: 601663) PREDICTED: estrogen re ( 495) 2223 404.4 2.6e-112
NP_001278652 (OMIM: 601663) estrogen receptor beta ( 495) 2223 404.4 2.6e-112
NP_001278641 (OMIM: 601663) estrogen receptor beta ( 495) 2223 404.4 2.6e-112
XP_016876569 (OMIM: 601663) PREDICTED: estrogen re ( 530) 2223 404.4 2.7e-112
XP_016876570 (OMIM: 601663) PREDICTED: estrogen re ( 530) 2223 404.4 2.7e-112
XP_016876572 (OMIM: 601663) PREDICTED: estrogen re ( 530) 2223 404.4 2.7e-112
XP_016876568 (OMIM: 601663) PREDICTED: estrogen re ( 530) 2223 404.4 2.7e-112
XP_016876571 (OMIM: 601663) PREDICTED: estrogen re ( 530) 2223 404.4 2.7e-112
NP_001428 (OMIM: 601663) estrogen receptor beta is ( 530) 2223 404.4 2.7e-112
XP_006715437 (OMIM: 114480,133430,157300,608446,61 ( 466) 601 116.9 8.1e-26
XP_011533849 (OMIM: 114480,133430,157300,608446,61 ( 483) 601 117.0 8.3e-26
XP_011533847 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
XP_016865870 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
XP_016865868 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
XP_016865867 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
NP_001116212 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
XP_011533846 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
XP_011533845 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
NP_001116214 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
XP_016865869 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
XP_016865865 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
XP_016865866 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
NP_000116 (OMIM: 114480,133430,157300,608446,61536 ( 595) 601 117.0 9.8e-26
NP_001116213 (OMIM: 114480,133430,157300,608446,61 ( 595) 601 117.0 9.8e-26
NP_001278170 (OMIM: 114480,133430,157300,608446,61 ( 594) 592 115.4 2.9e-25
NP_001278159 (OMIM: 114480,133430,157300,608446,61 ( 597) 576 112.6 2.1e-24
NP_001315029 (OMIM: 114480,133430,157300,608446,61 ( 310) 569 111.1 3e-24
XP_006715438 (OMIM: 114480,133430,157300,608446,61 ( 422) 569 111.2 3.8e-24
XP_016856121 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_011507577 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_011507579 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_016856124 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_011507581 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_016856126 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_016856125 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_011507576 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_011507582 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_016856120 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_016856122 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_016856123 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_011507580 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_011507578 (OMIM: 602969) PREDICTED: estrogen-re ( 442) 511 101.0 4.9e-21
XP_016856119 (OMIM: 602969) PREDICTED: estrogen-re ( 447) 511 101.0 4.9e-21
XP_011507573 (OMIM: 602969) PREDICTED: estrogen-re ( 447) 511 101.0 4.9e-21
XP_016856118 (OMIM: 602969) PREDICTED: estrogen-re ( 447) 511 101.0 4.9e-21
XP_016856117 (OMIM: 602969) PREDICTED: estrogen-re ( 461) 511 101.0 5e-21
>>NP_001258806 (OMIM: 601663) estrogen receptor beta iso (439 aa)
initn: 2230 init1: 2230 opt: 2230 Z-score: 2144.8 bits: 405.6 E(85289): 1e-112
Smith-Waterman score: 2230; 100.0% identity (100.0% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320
pF1KE2 LADKELVHMISWAKKIPGMRGNA
:::::::::::::::::::
NP_001 LADKELVHMISWAKKIPGMYPLVTATQDADSSRKLAHLLNAVTDALVWVIAKSGISSQQQ
310 320 330 340 350 360
>>NP_001258805 (OMIM: 601663) estrogen receptor beta iso (474 aa)
initn: 2223 init1: 2223 opt: 2223 Z-score: 2137.6 bits: 404.3 E(85289): 2.5e-112
Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320
pF1KE2 LADKELVHMISWAKKIPGMRGNA
::::::::::::::::::
NP_001 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
>>NP_001201831 (OMIM: 601663) estrogen receptor beta iso (481 aa)
initn: 2223 init1: 2223 opt: 2223 Z-score: 2137.6 bits: 404.3 E(85289): 2.5e-112
Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320
pF1KE2 LADKELVHMISWAKKIPGMRGNA
::::::::::::::::::
NP_001 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
>>NP_001035365 (OMIM: 601663) estrogen receptor beta iso (495 aa)
initn: 2223 init1: 2223 opt: 2223 Z-score: 2137.4 bits: 404.4 E(85289): 2.6e-112
Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320
pF1KE2 LADKELVHMISWAKKIPGMRGNA
::::::::::::::::::
NP_001 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
>>XP_016876573 (OMIM: 601663) PREDICTED: estrogen recept (495 aa)
initn: 2223 init1: 2223 opt: 2223 Z-score: 2137.4 bits: 404.4 E(85289): 2.6e-112
Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320
pF1KE2 LADKELVHMISWAKKIPGMRGNA
::::::::::::::::::
XP_016 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
>>NP_001278652 (OMIM: 601663) estrogen receptor beta iso (495 aa)
initn: 2223 init1: 2223 opt: 2223 Z-score: 2137.4 bits: 404.4 E(85289): 2.6e-112
Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320
pF1KE2 LADKELVHMISWAKKIPGMRGNA
::::::::::::::::::
NP_001 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
>>NP_001278641 (OMIM: 601663) estrogen receptor beta iso (495 aa)
initn: 2223 init1: 2223 opt: 2223 Z-score: 2137.4 bits: 404.4 E(85289): 2.6e-112
Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320
pF1KE2 LADKELVHMISWAKKIPGMRGNA
::::::::::::::::::
NP_001 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
>>XP_016876569 (OMIM: 601663) PREDICTED: estrogen recept (530 aa)
initn: 2223 init1: 2223 opt: 2223 Z-score: 2137.0 bits: 404.4 E(85289): 2.7e-112
Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320
pF1KE2 LADKELVHMISWAKKIPGMRGNA
::::::::::::::::::
XP_016 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
>>XP_016876570 (OMIM: 601663) PREDICTED: estrogen recept (530 aa)
initn: 2223 init1: 2223 opt: 2223 Z-score: 2137.0 bits: 404.4 E(85289): 2.7e-112
Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320
pF1KE2 LADKELVHMISWAKKIPGMRGNA
::::::::::::::::::
XP_016 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
>>XP_016876572 (OMIM: 601663) PREDICTED: estrogen recept (530 aa)
initn: 2223 init1: 2223 opt: 2223 Z-score: 2137.0 bits: 404.4 E(85289): 2.7e-112
Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320
pF1KE2 LADKELVHMISWAKKIPGMRGNA
::::::::::::::::::
XP_016 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
323 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:09:38 2016 done: Fri Nov 4 18:09:39 2016
Total Scan time: 7.510 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]