FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2633, 862 aa 1>>>pF1KE2633 862 - 862 aa - 862 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.6770+/-0.00163; mu= -18.4612+/- 0.097 mean_var=456.5896+/-96.117, 0's: 0 Z-trim(107.8): 90 B-trim: 56 in 1/52 Lambda= 0.060022 statistics sampled from 9759 (9812) to 9759 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.615), E-opt: 0.2 (0.301), width: 16 Scan time: 3.000 The best scores are: opt bits E(32554) CCDS45592.1 RABEP1 gene_id:9135|Hs108|chr17 ( 862) 5422 485.2 2.2e-136 CCDS42243.1 RABEP1 gene_id:9135|Hs108|chr17 ( 829) 4835 434.3 4.2e-121 >>CCDS45592.1 RABEP1 gene_id:9135|Hs108|chr17 (862 aa) initn: 5422 init1: 5422 opt: 5422 Z-score: 2562.2 bits: 485.2 E(32554): 2.2e-136 Smith-Waterman score: 5422; 100.0% identity (100.0% similar) in 862 aa overlap (1-862:1-862) 10 20 30 40 50 60 pF1KE2 MAQPGPASQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MAQPGPASQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 NAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 MKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQED 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 AEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 LNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 MEIVLTSEQLRQVEELKKKDQEDDEQQRLNKRKDHKKADVEEEIKIPVVCALTQEESSAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MEIVLTSEQLRQVEELKKKDQEDDEQQRLNKRKDHKKADVEEEIKIPVVCALTQEESSAQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 LSNEEEHLDSTRGSVHSLDAGLLLPSGDPFSKSDNDMFKDGLRRAQSTDSLGTSGSLQSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LSNEEEHLDSTRGSVHSLDAGLLLPSGDPFSKSDNDMFKDGLRRAQSTDSLGTSGSLQSK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 ALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 PEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 KQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALV 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 LRAQASEILLEELQQGLSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LRAQASEILLEELQQGLSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 SLQQAEDFILPDTTEALRELVLKYREDIINVRTAADHVEEKLKAEILFLKEQIQAEQCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SLQQAEDFILPDTTEALRELVLKYREDIINVRTAADHVEEKLKAEILFLKEQIQAEQCLK 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 ENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKISLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKISLE 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE2 EQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS 790 800 810 820 830 840 850 860 pF1KE2 LERIRAILNDTKLTDINQLPET :::::::::::::::::::::: CCDS45 LERIRAILNDTKLTDINQLPET 850 860 >>CCDS42243.1 RABEP1 gene_id:9135|Hs108|chr17 (829 aa) initn: 4846 init1: 4797 opt: 4835 Z-score: 2287.7 bits: 434.3 E(32554): 4.2e-121 Smith-Waterman score: 5159; 96.2% identity (96.2% similar) in 862 aa overlap (1-862:1-829) 10 20 30 40 50 60 pF1KE2 MAQPGPASQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MAQPGPASQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 NAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 MKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQED 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 AEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 AEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 LNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 MEIVLTSEQLRQVEELKKKDQEDDEQQRLNKRKDHKKADVEEEIKIPVVCALTQEESSAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MEIVLTSEQLRQVEELKKKDQEDDEQQRLNKRKDHKKADVEEEIKIPVVCALTQEESSAQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 LSNEEEHLDSTRGSVHSLDAGLLLPSGDPFSKSDNDMFKDGLRRAQSTDSLGTSGSLQSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LSNEEEHLDSTRGSVHSLDAGLLLPSGDPFSKSDNDMFKDGLRRAQSTDSLGTSGSLQSK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 ALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 PEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 PEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 KQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 KQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALV 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 LRAQASEILLEELQQGLSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LRAQASEILLEELQQGLSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 SLQQAEDFILPDTTEALRELVLKYREDIINVRTAADHVEEKLKAEILFLKEQIQAEQCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 SLQQAEDFILPDTTEALRELVLKYREDIINVRTAADHVEEKLKAEILFLKEQIQAEQCLK 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 ENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKISLE ::::::::::::::::::::::::::::::::::::: CCDS42 ENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQ----------------------- 730 740 750 790 800 810 820 830 840 pF1KE2 EQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ----------ATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS 760 770 780 790 800 850 860 pF1KE2 LERIRAILNDTKLTDINQLPET :::::::::::::::::::::: CCDS42 LERIRAILNDTKLTDINQLPET 810 820 862 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 16:38:14 2016 done: Tue Nov 8 16:38:14 2016 Total Scan time: 3.000 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]