Result of FASTA (omim) for
pF1KE2638
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2638, 264 aa
1>>>pF1KE2638 264 - 264 aa - 264 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8207+/-0.000381; mu= 17.4418+/- 0.024
mean_var=61.8044+/-12.890, 0's: 0 Z-trim(111.4): 26 B-trim: 0 in 0/51
Lambda= 0.163142
statistics sampled from 19986 (20003) to 19986 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.235), width: 16
Scan time: 6.980
The best scores are: opt bits E(85289)
XP_016884229 (OMIM: 614109) PREDICTED: BPI fold-co ( 450) 1693 407.2 2.6e-113
XP_011528393 (OMIM: 614109) PREDICTED: BPI fold-co ( 455) 901 220.8 3.5e-57
XP_011528392 (OMIM: 614109) PREDICTED: BPI fold-co ( 507) 901 220.8 3.8e-57
NP_777592 (OMIM: 614109) BPI fold-containing famil ( 507) 901 220.8 3.8e-57
XP_011528390 (OMIM: 614109) PREDICTED: BPI fold-co ( 507) 901 220.8 3.8e-57
XP_011528391 (OMIM: 614109) PREDICTED: BPI fold-co ( 507) 901 220.8 3.8e-57
NP_001716 (OMIM: 109195) bactericidal permeability ( 487) 273 73.0 1.1e-12
NP_001229849 (OMIM: 172425) phospholipid transfer ( 398) 216 59.5 1.1e-08
NP_001229850 (OMIM: 172425) phospholipid transfer ( 405) 216 59.6 1.1e-08
NP_872617 (OMIM: 172425) phospholipid transfer pro ( 441) 216 59.6 1.2e-08
NP_006218 (OMIM: 172425) phospholipid transfer pro ( 493) 216 59.6 1.3e-08
NP_004130 (OMIM: 151990) lipopolysaccharide-bindin ( 481) 214 59.1 1.7e-08
NP_079503 (OMIM: 614108) BPI fold-containing famil ( 458) 213 58.9 1.9e-08
NP_872325 (OMIM: 615718) BPI fold-containing famil ( 614) 141 42.0 0.0031
>>XP_016884229 (OMIM: 614109) PREDICTED: BPI fold-contai (450 aa)
initn: 1693 init1: 1693 opt: 1693 Z-score: 2155.2 bits: 407.2 E(85289): 2.6e-113
Smith-Waterman score: 1693; 100.0% identity (100.0% similar) in 264 aa overlap (1-264:187-450)
10 20 30
pF1KE2 MEKPILKNLNEMLCPIIASEVKALNANLST
::::::::::::::::::::::::::::::
XP_016 KLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIASEVKALNANLST
160 170 180 190 200 210
40 50 60 70 80 90
pF1KE2 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
220 230 240 250 260 270
100 110 120 130 140 150
pF1KE2 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSRVASTSVGLVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSRVASTSVGLVI
280 290 300 310 320 330
160 170 180 190 200 210
pF1KE2 LGQRLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGQRLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNP
340 350 360 370 380 390
220 230 240 250 260
pF1KE2 HKFLFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKFLFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
400 410 420 430 440 450
>>XP_011528393 (OMIM: 614109) PREDICTED: BPI fold-contai (455 aa)
initn: 1688 init1: 901 opt: 901 Z-score: 1147.7 bits: 220.8 E(85289): 3.5e-57
Smith-Waterman score: 1385; 80.7% identity (80.7% similar) in 296 aa overlap (1-239:135-430)
10 20 30
pF1KE2 MEKPILKNLNEMLCPIIASEVKALNANLST
::::::::::::::::::::::::::::::
XP_011 ALTNHGTANISTDWGFESPLFVLYNSFAEPMEKPILKNLNEMLCPIIASEVKALNANLST
110 120 130 140 150 160
40 50 60 70 80 90
pF1KE2 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
170 180 190 200 210 220
100 110 120 130 140
pF1KE2 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSR----------
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSRIAEIYILSQP
230 240 250 260 270 280
150
pF1KE2 -----------------------------------------------VASTSVGLVILGQ
:::::::::::::
XP_011 FMVRIMATEPPIINLQPGNFTLDIPASIMMLTQPKNSTVETIVSMDFVASTSVGLVILGQ
290 300 310 320 330 340
160 170 180 190 200 210
pF1KE2 RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKF
350 360 370 380 390 400
220 230 240 250 260
pF1KE2 LFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
::::::::::::::::::::::::::
XP_011 LFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
410 420 430 440 450
>>XP_011528392 (OMIM: 614109) PREDICTED: BPI fold-contai (507 aa)
initn: 1709 init1: 901 opt: 901 Z-score: 1147.0 bits: 220.8 E(85289): 3.8e-57
Smith-Waterman score: 1385; 80.7% identity (80.7% similar) in 296 aa overlap (1-239:187-482)
10 20 30
pF1KE2 MEKPILKNLNEMLCPIIASEVKALNANLST
::::::::::::::::::::::::::::::
XP_011 KLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIASEVKALNANLST
160 170 180 190 200 210
40 50 60 70 80 90
pF1KE2 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
220 230 240 250 260 270
100 110 120 130 140
pF1KE2 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSR----------
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSRIAEIYILSQP
280 290 300 310 320 330
150
pF1KE2 -----------------------------------------------VASTSVGLVILGQ
:::::::::::::
XP_011 FMVRIMATEPPIINLQPGNFTLDIPASIMMLTQPKNSTVETIVSMDFVASTSVGLVILGQ
340 350 360 370 380 390
160 170 180 190 200 210
pF1KE2 RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKF
400 410 420 430 440 450
220 230 240 250 260
pF1KE2 LFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
::::::::::::::::::::::::::
XP_011 LFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
460 470 480 490 500
>>NP_777592 (OMIM: 614109) BPI fold-containing family C (507 aa)
initn: 1709 init1: 901 opt: 901 Z-score: 1147.0 bits: 220.8 E(85289): 3.8e-57
Smith-Waterman score: 1385; 80.7% identity (80.7% similar) in 296 aa overlap (1-239:187-482)
10 20 30
pF1KE2 MEKPILKNLNEMLCPIIASEVKALNANLST
::::::::::::::::::::::::::::::
NP_777 KLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIASEVKALNANLST
160 170 180 190 200 210
40 50 60 70 80 90
pF1KE2 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
220 230 240 250 260 270
100 110 120 130 140
pF1KE2 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSR----------
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSRIAEIYILSQP
280 290 300 310 320 330
150
pF1KE2 -----------------------------------------------VASTSVGLVILGQ
:::::::::::::
NP_777 FMVRIMATEPPIINLQPGNFTLDIPASIMMLTQPKNSTVETIVSMDFVASTSVGLVILGQ
340 350 360 370 380 390
160 170 180 190 200 210
pF1KE2 RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKF
400 410 420 430 440 450
220 230 240 250 260
pF1KE2 LFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
::::::::::::::::::::::::::
NP_777 LFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
460 470 480 490 500
>>XP_011528390 (OMIM: 614109) PREDICTED: BPI fold-contai (507 aa)
initn: 1709 init1: 901 opt: 901 Z-score: 1147.0 bits: 220.8 E(85289): 3.8e-57
Smith-Waterman score: 1385; 80.7% identity (80.7% similar) in 296 aa overlap (1-239:187-482)
10 20 30
pF1KE2 MEKPILKNLNEMLCPIIASEVKALNANLST
::::::::::::::::::::::::::::::
XP_011 KLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIASEVKALNANLST
160 170 180 190 200 210
40 50 60 70 80 90
pF1KE2 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
220 230 240 250 260 270
100 110 120 130 140
pF1KE2 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSR----------
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSRIAEIYILSQP
280 290 300 310 320 330
150
pF1KE2 -----------------------------------------------VASTSVGLVILGQ
:::::::::::::
XP_011 FMVRIMATEPPIINLQPGNFTLDIPASIMMLTQPKNSTVETIVSMDFVASTSVGLVILGQ
340 350 360 370 380 390
160 170 180 190 200 210
pF1KE2 RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKF
400 410 420 430 440 450
220 230 240 250 260
pF1KE2 LFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
::::::::::::::::::::::::::
XP_011 LFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
460 470 480 490 500
>>XP_011528391 (OMIM: 614109) PREDICTED: BPI fold-contai (507 aa)
initn: 1709 init1: 901 opt: 901 Z-score: 1147.0 bits: 220.8 E(85289): 3.8e-57
Smith-Waterman score: 1385; 80.7% identity (80.7% similar) in 296 aa overlap (1-239:187-482)
10 20 30
pF1KE2 MEKPILKNLNEMLCPIIASEVKALNANLST
::::::::::::::::::::::::::::::
XP_011 KLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIASEVKALNANLST
160 170 180 190 200 210
40 50 60 70 80 90
pF1KE2 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSNS
220 230 240 250 260 270
100 110 120 130 140
pF1KE2 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSR----------
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSRIAEIYILSQP
280 290 300 310 320 330
150
pF1KE2 -----------------------------------------------VASTSVGLVILGQ
:::::::::::::
XP_011 FMVRIMATEPPIINLQPGNFTLDIPASIMMLTQPKNSTVETIVSMDFVASTSVGLVILGQ
340 350 360 370 380 390
160 170 180 190 200 210
pF1KE2 RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKF
400 410 420 430 440 450
220 230 240 250 260
pF1KE2 LFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
::::::::::::::::::::::::::
XP_011 LFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
460 470 480 490 500
>>NP_001716 (OMIM: 109195) bactericidal permeability-inc (487 aa)
initn: 391 init1: 236 opt: 273 Z-score: 348.4 bits: 73.0 E(85289): 1.1e-12
Smith-Waterman score: 330; 26.8% identity (57.6% similar) in 295 aa overlap (1-236:193-487)
10 20
pF1KE2 MEKPILKNLNEMLCPIIASEVKA-LNANLS
.:. . ...: ..: ... :.. :. ..
NP_001 CSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQ
170 180 190 200 210 220
30 40 50 60 70 80
pF1KE2 TLEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSPVPFVLPERSN
:: :.::::. . ..:.:.. : : . ::...:: :: .. . :::.: . .: .
NP_001 TLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNPPPFAPPVMEFPAAHD
230 240 250 260 270 280
90 100 110 120 130 140
pF1KE2 SMLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEIS--NHFVQNSQGLGNVLSRVA-----
:.:.:...:::..:.... :::...:: . : ..: ... .:. : .::
NP_001 RMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPN
290 300 310 320 330 340
150
pF1KE2 --------------------------------------STSVGLVILGQ-----------
:. ..: ..:.
NP_001 MKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSSLASLFLIGMHTTGSMEVSAE
350 360 370 380 390 400
160 170 180 190 200 210
pF1KE2 --RLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPH
::: :.:.:. : : .:: . . : ...:.. :. . ::: .: :::.:::: .:
NP_001 SNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPA
410 420 430 440 450 460
220 230 240 250 260
pF1KE2 KFLFVNSDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
. . : .. ..:::...:. :.
NP_001 RVQLYNVVLQPHQNFLLFGADVVYK
470 480
>>NP_001229849 (OMIM: 172425) phospholipid transfer prot (398 aa)
initn: 310 init1: 171 opt: 216 Z-score: 277.2 bits: 59.5 E(85289): 1.1e-08
Smith-Waterman score: 256; 24.7% identity (55.6% similar) in 288 aa overlap (9-235:85-369)
10 20 30
pF1KE2 MEKPILKNLNEMLCPII--ASEVKALNANLSTLEVLTK
::...::.. :. : ::. :.:. : ..
NP_001 RGKEGHFYYNISEKVYDFLSTFITSGMRFLLNQQICPVLYHAGTV-LLNSLLDTVPVRSS
60 70 80 90 100 110
40 50 60 70 80 90
pF1KE2 IDNYTLLDYSLISSPEITENYLDLNLKGVFYPL--ENLTDPPFSPVPFVLPERSNSMLYI
.:. . .::::...: . . ::....:.:.:: .: . : . : . :. :.:.
NP_001 VDELVGIDYSLMKDPVASTSNLDMDFRGAFFPLTERNWSLPNRAVEPQLQEEER--MVYV
120 130 140 150 160 170
100 110 120 130
pF1KE2 GIAEYFFKSASFAHFTAGVFNVTLSTEEI---------SNHF---------VQNS-----
...:.:: :: ..: ::.... : ... ...: : .:
NP_001 AFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLDMLLRATYFGSIVLLSPAVIDSPLKLE
180 190 200 210 220 230
140 150
pF1KE2 -----------QGLGNVLSRVASTSVGLV-----------------------ILGQRLVC
. :...: .::....:: . :. :
NP_001 LRVLAPPRCTIKPSGTTISVTASVTIALVPPDQPEVQLSSMTMDARLSAKMALRGKALRT
240 250 260 270 280 290
160 170 180 190 200 210
pF1KE2 SLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKFLFVN
.:.: :::. .: .. .. .. :...:..::.:. : . .: . :. . ::.
NP_001 QLDLRRFRIYSNHSALESLALIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVH
300 310 320 330 340 350
220 230 240 250 260
pF1KE2 SDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
. ::: :..::..
NP_001 EVVTNHAGFLTIGADLHFAKGLREVIEKNRPADVRASTAPTPSTAAV
360 370 380 390
>>NP_001229850 (OMIM: 172425) phospholipid transfer prot (405 aa)
initn: 310 init1: 171 opt: 216 Z-score: 277.1 bits: 59.6 E(85289): 1.1e-08
Smith-Waterman score: 256; 24.7% identity (55.6% similar) in 288 aa overlap (9-235:92-376)
10 20 30
pF1KE2 MEKPILKNLNEMLCPII--ASEVKALNANLSTLEVLTK
::...::.. :. : ::. :.:. : ..
NP_001 VSRMHAAFGGTFKKVYDFLSTFITSGMRFLLNQQICPVLYHAGTV-LLNSLLDTVPVRSS
70 80 90 100 110 120
40 50 60 70 80 90
pF1KE2 IDNYTLLDYSLISSPEITENYLDLNLKGVFYPL--ENLTDPPFSPVPFVLPERSNSMLYI
.:. . .::::...: . . ::....:.:.:: .: . : . : . :. :.:.
NP_001 VDELVGIDYSLMKDPVASTSNLDMDFRGAFFPLTERNWSLPNRAVEPQLQEEER--MVYV
130 140 150 160 170
100 110 120 130
pF1KE2 GIAEYFFKSASFAHFTAGVFNVTLSTEEI---------SNHF---------VQNS-----
...:.:: :: ..: ::.... : ... ...: : .:
NP_001 AFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLDMLLRATYFGSIVLLSPAVIDSPLKLE
180 190 200 210 220 230
140 150
pF1KE2 -----------QGLGNVLSRVASTSVGLV-----------------------ILGQRLVC
. :...: .::....:: . :. :
NP_001 LRVLAPPRCTIKPSGTTISVTASVTIALVPPDQPEVQLSSMTMDARLSAKMALRGKALRT
240 250 260 270 280 290
160 170 180 190 200 210
pF1KE2 SLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKFLFVN
.:.: :::. .: .. .. .. :...:..::.:. : . .: . :. . ::.
NP_001 QLDLRRFRIYSNHSALESLALIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVH
300 310 320 330 340 350
220 230 240 250 260
pF1KE2 SDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
. ::: :..::..
NP_001 EVVTNHAGFLTIGADLHFAKGLREVIEKNRPADVRASTAPTPSTAAV
360 370 380 390 400
>>NP_872617 (OMIM: 172425) phospholipid transfer protein (441 aa)
initn: 310 init1: 171 opt: 216 Z-score: 276.5 bits: 59.6 E(85289): 1.2e-08
Smith-Waterman score: 256; 24.7% identity (55.6% similar) in 288 aa overlap (9-235:128-412)
10 20 30
pF1KE2 MEKPILKNLNEMLCPII--ASEVKALNANLSTLEVLTK
::...::.. :. : ::. :.:. : ..
NP_872 GLRFRRQLLYWFLKVYDFLSTFITSGMRFLLNQQICPVLYHAGTV-LLNSLLDTVPVRSS
100 110 120 130 140 150
40 50 60 70 80 90
pF1KE2 IDNYTLLDYSLISSPEITENYLDLNLKGVFYPL--ENLTDPPFSPVPFVLPERSNSMLYI
.:. . .::::...: . . ::....:.:.:: .: . : . : . :. :.:.
NP_872 VDELVGIDYSLMKDPVASTSNLDMDFRGAFFPLTERNWSLPNRAVEPQLQEEER--MVYV
160 170 180 190 200 210
100 110 120 130
pF1KE2 GIAEYFFKSASFAHFTAGVFNVTLSTEEI---------SNHF---------VQNS-----
...:.:: :: ..: ::.... : ... ...: : .:
NP_872 AFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLDMLLRATYFGSIVLLSPAVIDSPLKLE
220 230 240 250 260 270
140 150
pF1KE2 -----------QGLGNVLSRVASTSVGLV-----------------------ILGQRLVC
. :...: .::....:: . :. :
NP_872 LRVLAPPRCTIKPSGTTISVTASVTIALVPPDQPEVQLSSMTMDARLSAKMALRGKALRT
280 290 300 310 320 330
160 170 180 190 200 210
pF1KE2 SLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAKLQQGFPLSNPHKFLFVN
.:.: :::. .: .. .. .. :...:..::.:. : . .: . :. . ::.
NP_872 QLDLRRFRIYSNHSALESLALIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVH
340 350 360 370 380 390
220 230 240 250 260
pF1KE2 SDIEVLEGFLLISTDLKYETSSKQQPSFHVWEGLNLISRQWRGKSAP
. ::: :..::..
NP_872 EVVTNHAGFLTIGADLHFAKGLREVIEKNRPADVRASTAPTPSTAAV
400 410 420 430 440
264 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:22:45 2016 done: Sun Nov 6 14:22:46 2016
Total Scan time: 6.980 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]