FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2641, 439 aa 1>>>pF1KE2641 439 - 439 aa - 439 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.8103+/-0.000936; mu= 6.9023+/- 0.057 mean_var=134.6467+/-26.215, 0's: 0 Z-trim(109.8): 26 B-trim: 9 in 1/50 Lambda= 0.110529 statistics sampled from 11159 (11178) to 11159 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.343), width: 16 Scan time: 2.940 The best scores are: opt bits E(32554) CCDS58356.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 439) 2842 464.4 9.7e-131 CCDS45236.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 440) 2830 462.5 3.7e-130 CCDS73708.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 440) 2830 462.5 3.7e-130 CCDS45234.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 441) 2818 460.6 1.4e-129 CCDS58357.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 426) 2112 348.0 1e-95 CCDS58358.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 378) 1799 298.1 1e-80 >>CCDS58356.1 NUSAP1 gene_id:51203|Hs108|chr15 (439 aa) initn: 2842 init1: 2842 opt: 2842 Z-score: 2460.6 bits: 464.4 E(32554): 9.7e-131 Smith-Waterman score: 2842; 100.0% identity (100.0% similar) in 439 aa overlap (1-439:1-439) 10 20 30 40 50 60 pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHSEIKISNPTEFQNHEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHSEIKISNPTEFQNHEK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSVA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 STPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 STPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTPA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 RKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 RKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLKA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 SLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 SLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQER 370 380 390 400 410 420 430 pF1KE2 KEKKAKVLGMRRGLILAED ::::::::::::::::::: CCDS58 KEKKAKVLGMRRGLILAED 430 >>CCDS45236.1 NUSAP1 gene_id:51203|Hs108|chr15 (440 aa) initn: 2201 init1: 2201 opt: 2830 Z-score: 2450.3 bits: 462.5 E(32554): 3.7e-130 Smith-Waterman score: 2830; 99.8% identity (99.8% similar) in 440 aa overlap (1-439:1-440) 10 20 30 40 50 60 pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQ-NHSEIKISNPTEFQNHE :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: CCDS45 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQQNHSEIKISNPTEFQNHE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSV 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE2 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE2 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE2 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE 370 380 390 400 410 420 420 430 pF1KE2 RKEKKAKVLGMRRGLILAED :::::::::::::::::::: CCDS45 RKEKKAKVLGMRRGLILAED 430 440 >>CCDS73708.1 NUSAP1 gene_id:51203|Hs108|chr15 (440 aa) initn: 1436 init1: 1436 opt: 2830 Z-score: 2450.3 bits: 462.5 E(32554): 3.7e-130 Smith-Waterman score: 2830; 99.8% identity (99.8% similar) in 440 aa overlap (1-439:1-440) 10 20 30 40 50 60 pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHSEIKISNPTEFQNHEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHSEIKISNPTEFQNHEK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQ-PINKGGVRTPVPPRGRLSV :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: CCDS73 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQQPINKGGVRTPVPPRGRLSV 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE2 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE2 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE2 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE 370 380 390 400 410 420 420 430 pF1KE2 RKEKKAKVLGMRRGLILAED :::::::::::::::::::: CCDS73 RKEKKAKVLGMRRGLILAED 430 440 >>CCDS45234.1 NUSAP1 gene_id:51203|Hs108|chr15 (441 aa) initn: 2071 init1: 1436 opt: 2818 Z-score: 2439.9 bits: 460.6 E(32554): 1.4e-129 Smith-Waterman score: 2818; 99.5% identity (99.5% similar) in 441 aa overlap (1-439:1-441) 10 20 30 40 50 60 pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQ-NHSEIKISNPTEFQNHE :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: CCDS45 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQQNHSEIKISNPTEFQNHE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQ-PINKGGVRTPVPPRGRLS ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: CCDS45 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQQPINKGGVRTPVPPRGRLS 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE2 VASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKT 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE2 PARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDL 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE2 KASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQ 370 380 390 400 410 420 420 430 pF1KE2 ERKEKKAKVLGMRRGLILAED ::::::::::::::::::::: CCDS45 ERKEKKAKVLGMRRGLILAED 430 440 >>CCDS58357.1 NUSAP1 gene_id:51203|Hs108|chr15 (426 aa) initn: 2087 init1: 1436 opt: 2112 Z-score: 1831.7 bits: 348.0 E(32554): 1e-95 Smith-Waterman score: 2700; 96.6% identity (96.6% similar) in 440 aa overlap (1-439:1-426) 10 20 30 40 50 60 pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHSEIKISNPTEFQNHEK :::::::::::::::::::::::::::::::::::::::::::: :: CCDS58 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNH--------------EK 70 80 90 100 130 140 150 160 170 180 pF1KE2 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT 110 120 130 140 150 160 190 200 210 220 230 pF1KE2 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQ-PINKGGVRTPVPPRGRLSV :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: CCDS58 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQQPINKGGVRTPVPPRGRLSV 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE2 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE2 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE 350 360 370 380 390 400 420 430 pF1KE2 RKEKKAKVLGMRRGLILAED :::::::::::::::::::: CCDS58 RKEKKAKVLGMRRGLILAED 410 420 >>CCDS58358.1 NUSAP1 gene_id:51203|Hs108|chr15 (378 aa) initn: 2109 init1: 1501 opt: 1799 Z-score: 1562.8 bits: 298.1 E(32554): 1e-80 Smith-Waterman score: 2290; 85.7% identity (85.7% similar) in 440 aa overlap (1-439:1-378) 10 20 30 40 50 60 pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS ::::::::::::::::::::::::::::::: :::::: CCDS58 MIIPSLEELDSLKYSDLQNLAKSLGLRANLR-----------------------DESQTS 10 20 30 70 80 90 100 110 pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQ-NHSEIKISNPTEFQNHE :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: CCDS58 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQQNHSEIKISNPTEFQNHE 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE2 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE2 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSV 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE2 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE2 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK :::::::::::::::::::::::::::::::::: CCDS58 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAA-------------------------- 280 290 300 310 360 370 380 390 400 410 pF1KE2 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE ::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 -------------GKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE 320 330 340 350 420 430 pF1KE2 RKEKKAKVLGMRRGLILAED :::::::::::::::::::: CCDS58 RKEKKAKVLGMRRGLILAED 360 370 439 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 17:39:21 2016 done: Tue Nov 8 17:39:21 2016 Total Scan time: 2.940 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]