FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2712, 180 aa 1>>>pF1KE2712 180 - 180 aa - 180 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.2779+/-0.000808; mu= 8.5839+/- 0.049 mean_var=302.4620+/-63.049, 0's: 0 Z-trim(117.7): 20 B-trim: 150 in 1/53 Lambda= 0.073746 statistics sampled from 18429 (18446) to 18429 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.845), E-opt: 0.2 (0.567), width: 16 Scan time: 1.090 The best scores are: opt bits E(32554) CCDS44025.1 CTAG1A gene_id:246100|Hs108|chrX ( 180) 1261 145.9 1.3e-35 CCDS14758.1 CTAG1B gene_id:1485|Hs108|chrX ( 180) 1261 145.9 1.3e-35 CCDS35455.1 CTAG2 gene_id:30848|Hs108|chrX ( 180) 1084 127.0 6.1e-30 CCDS14759.1 CTAG2 gene_id:30848|Hs108|chrX ( 210) 789 95.7 1.8e-20 >>CCDS44025.1 CTAG1A gene_id:246100|Hs108|chrX (180 aa) initn: 1261 init1: 1261 opt: 1261 Z-score: 752.8 bits: 145.9 E(32554): 1.3e-35 Smith-Waterman score: 1261; 100.0% identity (100.0% similar) in 180 aa overlap (1-180:1-180) 10 20 30 40 50 60 pF1KE2 MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 PRGPHGGAASGLNGCCRCGARGPESRLLEFYLAMPFATPMEAELARRSLAQDAPPLPVPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PRGPHGGAASGLNGCCRCGARGPESRLLEFYLAMPFATPMEAELARRSLAQDAPPLPVPG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VLLKEFTVSGNILTIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQPPSGQRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VLLKEFTVSGNILTIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQPPSGQRR 130 140 150 160 170 180 >>CCDS14758.1 CTAG1B gene_id:1485|Hs108|chrX (180 aa) initn: 1261 init1: 1261 opt: 1261 Z-score: 752.8 bits: 145.9 E(32554): 1.3e-35 Smith-Waterman score: 1261; 100.0% identity (100.0% similar) in 180 aa overlap (1-180:1-180) 10 20 30 40 50 60 pF1KE2 MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 PRGPHGGAASGLNGCCRCGARGPESRLLEFYLAMPFATPMEAELARRSLAQDAPPLPVPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 PRGPHGGAASGLNGCCRCGARGPESRLLEFYLAMPFATPMEAELARRSLAQDAPPLPVPG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VLLKEFTVSGNILTIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQPPSGQRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 VLLKEFTVSGNILTIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQPPSGQRR 130 140 150 160 170 180 >>CCDS35455.1 CTAG2 gene_id:30848|Hs108|chrX (180 aa) initn: 1084 init1: 1084 opt: 1084 Z-score: 651.1 bits: 127.0 E(32554): 6.1e-30 Smith-Waterman score: 1084; 85.6% identity (94.4% similar) in 180 aa overlap (1-180:1-180) 10 20 30 40 50 60 pF1KE2 MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: CCDS35 MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 PRGPHGGAASGLNGCCRCGARGPESRLLEFYLAMPFATPMEAELARRSLAQDAPPLPVPG ::::::::::. .: : :::: :.:::::....:::..::::::.:: :..:: ::: :: CCDS35 PRGPHGGAASAQDGRCPCGARRPDSRLLELHITMPFSSPMEAELVRRILSRDAAPLPRPG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VLLKEFTVSGNILTIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQPPSGQRR ..::.::::::.: ::::::::::::::::::::::::::::::::::::::: :::::: CCDS35 AVLKDFTVSGNLLFIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQAPSGQRR 130 140 150 160 170 180 >>CCDS14759.1 CTAG2 gene_id:30848|Hs108|chrX (210 aa) initn: 789 init1: 789 opt: 789 Z-score: 480.8 bits: 95.7 E(32554): 1.8e-20 Smith-Waterman score: 789; 78.0% identity (90.8% similar) in 141 aa overlap (1-141:1-141) 10 20 30 40 50 60 pF1KE2 MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: CCDS14 MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 PRGPHGGAASGLNGCCRCGARGPESRLLEFYLAMPFATPMEAELARRSLAQDAPPLPVPG ::::::::::. .: : :::: :.:::::....:::..::::::.:: :..:: ::: :: CCDS14 PRGPHGGAASAQDGRCPCGARRPDSRLLELHITMPFSSPMEAELVRRILSRDAAPLPRPG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VLLKEFTVSGNILTIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQPPSGQRR ..::.::::::.: . . : CCDS14 AVLKDFTVSGNLLFMSVRDQDREGAGRMRVVGWGLGSASPEGQKARDLRTPKHKVSEQRP 130 140 150 160 170 180 180 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Jan 5 10:03:32 2018 done: Fri Jan 5 10:03:32 2018 Total Scan time: 1.090 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]