FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2758, 654 aa 1>>>pF1KE2758 654 - 654 aa - 654 aa Library: /omim/omim.rfq.tfa 64236559 residues in 92054 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.6775+/-0.000488; mu= 1.2131+/- 0.031 mean_var=613.1459+/-123.399, 0's: 0 Z-trim(123.1): 517 B-trim: 0 in 0/57 Lambda= 0.051796 statistics sampled from 43491 (44036) to 43491 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.741), E-opt: 0.2 (0.478), width: 16 Scan time: 6.240 The best scores are: opt bits E(92054) NP_942014 (OMIM: 610004,616219) collagen alpha-1(X ( 654) 4805 374.4 7.8e-103 XP_016864225 (OMIM: 610004,616219) collagen alpha- ( 657) 4572 357.0 1.4e-97 NP_115907 (OMIM: 610004,616219) collagen alpha-1(X ( 642) 4497 351.4 6.5e-96 XP_011530637 (OMIM: 610004,616219) collagen alpha- ( 696) 4271 334.5 8.3e-91 XP_011530636 (OMIM: 610004,616219) collagen alpha- ( 696) 4271 334.5 8.3e-91 XP_011530635 (OMIM: 610004,616219) collagen alpha- ( 696) 4271 334.5 8.3e-91 XP_011530640 (OMIM: 610004,616219) collagen alpha- ( 690) 4199 329.1 3.4e-89 XP_016864224 (OMIM: 610004,616219) collagen alpha- ( 678) 4172 327.1 1.4e-88 XP_016864226 (OMIM: 610004,616219) collagen alpha- ( 583) 3467 274.3 9.2e-73 XP_011530657 (OMIM: 610004,616219) collagen alpha- ( 583) 3467 274.3 9.2e-73 XP_011530658 (OMIM: 610004,616219) collagen alpha- ( 577) 3395 269.0 3.8e-71 NP_001243003 (OMIM: 610004,616219) collagen alpha- ( 645) 3242 257.6 1.1e-67 XP_011530660 (OMIM: 610004,616219) collagen alpha- ( 535) 3131 249.2 3.2e-65 NP_001355824 (OMIM: 120350,616720) collagen alpha- ( 657) 1687 141.4 1.1e-32 NP_001355813 (OMIM: 120350,616720) collagen alpha- ( 666) 1677 140.7 1.8e-32 XP_016871178 (OMIM: 120350,616720) collagen alpha- ( 663) 1670 140.1 2.6e-32 NP_001355814 (OMIM: 120350,616720) collagen alpha- ( 651) 1656 139.1 5.3e-32 XP_016871171 (OMIM: 120350,616720) collagen alpha- ( 684) 1646 138.4 9.2e-32 XP_016871180 (OMIM: 120350,616720) collagen alpha- ( 651) 1636 137.6 1.5e-31 XP_016871170 (OMIM: 120350,616720) collagen alpha- ( 692) 1610 135.7 6e-31 NP_001307880 (OMIM: 120350,616720) collagen alpha- ( 680) 1589 134.1 1.8e-30 NP_001355826 (OMIM: 120350,616720) collagen alpha- ( 625) 1574 132.9 3.6e-30 XP_016871173 (OMIM: 120350,616720) collagen alpha- ( 680) 1573 132.9 4e-30 XP_016871176 (OMIM: 120350,616720) collagen alpha- ( 672) 1568 132.5 5.2e-30 NP_542991 (OMIM: 120350,616720) collagen alpha-1(X ( 695) 1558 131.8 8.8e-30 NP_542992 (OMIM: 120350,616720) collagen alpha-1(X ( 668) 1552 131.3 1.2e-29 XP_024303583 (OMIM: 120350,616720) collagen alpha- ( 710) 1542 130.6 2e-29 XP_011537595 (OMIM: 120350,616720) collagen alpha- ( 713) 1542 130.6 2.1e-29 XP_011537596 (OMIM: 120350,616720) collagen alpha- ( 707) 1536 130.2 2.8e-29 XP_016871168 (OMIM: 120350,616720) collagen alpha- ( 698) 1533 129.9 3.2e-29 XP_016871175 (OMIM: 120350,616720) collagen alpha- ( 675) 1525 129.3 4.8e-29 XP_016871182 (OMIM: 120350,616720) collagen alpha- ( 649) 1523 129.1 5.2e-29 XP_011537597 (OMIM: 120350,616720) collagen alpha- ( 701) 1521 129.0 6e-29 XP_016871174 (OMIM: 120350,616720) collagen alpha- ( 678) 1515 128.6 8.1e-29 XP_016869755 (OMIM: 120215,130000,130010) collagen (1715) 1511 128.9 1.7e-28 NP_001265003 (OMIM: 120215,130000,130010) collagen (1838) 1511 128.9 1.7e-28 NP_000084 (OMIM: 120215,130000,130010) collagen al (1838) 1511 128.9 1.7e-28 NP_001355812 (OMIM: 120350,616720) collagen alpha- ( 684) 1494 127.0 2.4e-28 NP_542990 (OMIM: 120350,616720) collagen alpha-1(X ( 686) 1487 126.5 3.5e-28 XP_011515191 (OMIM: 610026) collagen alpha-1(XXII) (1058) 1488 126.8 4.2e-28 XP_011515189 (OMIM: 610026) collagen alpha-1(XXII) (1264) 1488 127.0 4.6e-28 XP_016868641 (OMIM: 610026) collagen alpha-1(XXII) (1264) 1488 127.0 4.6e-28 XP_016868640 (OMIM: 610026) collagen alpha-1(XXII) (1552) 1488 127.1 5.2e-28 NP_542995 (OMIM: 120350,616720) collagen alpha-1(X ( 610) 1478 125.7 5.2e-28 XP_016868639 (OMIM: 610026) collagen alpha-1(XXII) (1564) 1488 127.1 5.2e-28 XP_011515188 (OMIM: 610026) collagen alpha-1(XXII) (1577) 1488 127.1 5.2e-28 XP_011515187 (OMIM: 610026) collagen alpha-1(XXII) (1588) 1488 127.1 5.2e-28 XP_011515186 (OMIM: 610026) collagen alpha-1(XXII) (1593) 1488 127.1 5.2e-28 XP_011515185 (OMIM: 610026) collagen alpha-1(XXII) (1606) 1488 127.1 5.3e-28 XP_016871166 (OMIM: 120350,616720) collagen alpha- ( 713) 1473 125.5 7.3e-28 >>NP_942014 (OMIM: 610004,616219) collagen alpha-1(XXV) (654 aa) initn: 4805 init1: 4805 opt: 4805 Z-score: 1967.8 bits: 374.4 E(92054): 7.8e-103 Smith-Waterman score: 4805; 100.0% identity (100.0% similar) in 654 aa overlap (1-654:1-654) 10 20 30 40 50 60 pF1KE2 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP 550 560 570 580 590 600 610 620 630 640 650 pF1KE2 GPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_942 GPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK 610 620 630 640 650 >>XP_016864225 (OMIM: 610004,616219) collagen alpha-1(XX (657 aa) initn: 4253 init1: 4253 opt: 4572 Z-score: 1873.7 bits: 357.0 E(92054): 1.4e-97 Smith-Waterman score: 4676; 96.8% identity (96.8% similar) in 666 aa overlap (1-654:1-657) 10 20 30 40 50 60 pF1KE2 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 490 500 510 520 530 540 550 560 570 580 pF1KE2 GPMGPHGLPGPKG------------TDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLP ::::::::::::: ::::::::::::::::::::::::::::::::::: XP_016 GPMGPHGLPGPKGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLP 550 560 570 580 590 600 590 600 610 620 630 640 pF1KE2 GKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPM : :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 G---------FPGPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPM 610 620 630 640 650 650 pF1KE2 PGCWQK :::::: XP_016 PGCWQK >>NP_115907 (OMIM: 610004,616219) collagen alpha-1(XXV) (642 aa) initn: 4497 init1: 4497 opt: 4497 Z-score: 1843.5 bits: 351.4 E(92054): 6.5e-96 Smith-Waterman score: 4497; 100.0% identity (100.0% similar) in 615 aa overlap (1-615:1-615) 10 20 30 40 50 60 pF1KE2 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP 550 560 570 580 590 600 610 620 630 640 650 pF1KE2 GPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK ::::::::::::::: NP_115 GPRGEKGDLGEKGEKVTSPSQHVPCLILLLLSALLFSLCDSI 610 620 630 640 >>XP_011530637 (OMIM: 610004,616219) collagen alpha-1(XX (696 aa) initn: 5639 init1: 4252 opt: 4271 Z-score: 1751.9 bits: 334.5 E(92054): 8.3e-91 Smith-Waterman score: 4533; 92.4% identity (92.9% similar) in 686 aa overlap (1-644:1-686) 10 20 30 40 50 60 pF1KE2 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 490 500 510 520 530 540 550 560 pF1KE2 GPMGPHGLPGPKG---------------------------------------TDGPMGPH ::::::::::::: :::::::: XP_011 GPMGPHGLPGPKGEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPH 550 560 570 580 590 600 570 580 590 600 610 620 pF1KE2 GPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVK ::::::::::::::::::::::::::::::::::::::::::::::::::::::: .: : XP_011 GPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGEKGKK 610 620 630 640 650 660 630 640 650 pF1KE2 GEKG---EPGQPGLDGLDAPCQLGPDGLPMPGCWQK :.:: : :. : :::::: :::: XP_011 GKKGPKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQK 670 680 690 >>XP_011530636 (OMIM: 610004,616219) collagen alpha-1(XX (696 aa) initn: 5639 init1: 4252 opt: 4271 Z-score: 1751.9 bits: 334.5 E(92054): 8.3e-91 Smith-Waterman score: 4533; 92.4% identity (92.9% similar) in 686 aa overlap (1-644:1-686) 10 20 30 40 50 60 pF1KE2 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 490 500 510 520 530 540 550 560 pF1KE2 GPMGPHGLPGPKG---------------------------------------TDGPMGPH ::::::::::::: :::::::: XP_011 GPMGPHGLPGPKGEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPH 550 560 570 580 590 600 570 580 590 600 610 620 pF1KE2 GPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVK ::::::::::::::::::::::::::::::::::::::::::::::::::::::: .: : XP_011 GPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGEKGKK 610 620 630 640 650 660 630 640 650 pF1KE2 GEKG---EPGQPGLDGLDAPCQLGPDGLPMPGCWQK :.:: : :. : :::::: :::: XP_011 GKKGPKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQK 670 680 690 >>XP_011530635 (OMIM: 610004,616219) collagen alpha-1(XX (696 aa) initn: 5639 init1: 4252 opt: 4271 Z-score: 1751.9 bits: 334.5 E(92054): 8.3e-91 Smith-Waterman score: 4533; 92.4% identity (92.9% similar) in 686 aa overlap (1-644:1-686) 10 20 30 40 50 60 pF1KE2 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 490 500 510 520 530 540 550 560 pF1KE2 GPMGPHGLPGPKG---------------------------------------TDGPMGPH ::::::::::::: :::::::: XP_011 GPMGPHGLPGPKGEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPH 550 560 570 580 590 600 570 580 590 600 610 620 pF1KE2 GPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVK ::::::::::::::::::::::::::::::::::::::::::::::::::::::: .: : XP_011 GPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGEKGKK 610 620 630 640 650 660 630 640 650 pF1KE2 GEKG---EPGQPGLDGLDAPCQLGPDGLPMPGCWQK :.:: : :. : :::::: :::: XP_011 GKKGPKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQK 670 680 690 >>XP_011530640 (OMIM: 610004,616219) collagen alpha-1(XX (690 aa) initn: 4739 init1: 3313 opt: 4199 Z-score: 1722.8 bits: 329.1 E(92054): 3.4e-89 Smith-Waterman score: 4461; 91.5% identity (92.0% similar) in 686 aa overlap (1-644:1-680) 10 20 30 40 50 60 pF1KE2 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ ::::::::::::::::::::: ::::::::::::::::::::::::::::::::: XP_011 PAGPPGKRGKRGRRGESGPPG------PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE2 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE2 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE2 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE2 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 420 430 440 450 460 470 490 500 510 520 530 540 pF1KE2 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 480 490 500 510 520 530 550 560 pF1KE2 GPMGPHGLPGPKG---------------------------------------TDGPMGPH ::::::::::::: :::::::: XP_011 GPMGPHGLPGPKGEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPH 540 550 560 570 580 590 570 580 590 600 610 620 pF1KE2 GPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVK ::::::::::::::::::::::::::::::::::::::::::::::::::::::: .: : XP_011 GPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGEKGKK 600 610 620 630 640 650 630 640 650 pF1KE2 GEKG---EPGQPGLDGLDAPCQLGPDGLPMPGCWQK :.:: : :. : :::::: :::: XP_011 GKKGPKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQK 660 670 680 690 >>XP_016864224 (OMIM: 610004,616219) collagen alpha-1(XX (678 aa) initn: 6564 init1: 3301 opt: 4172 Z-score: 1712.0 bits: 327.1 E(92054): 1.4e-88 Smith-Waterman score: 4550; 92.2% identity (92.2% similar) in 693 aa overlap (1-654:1-678) 10 20 30 40 50 60 pF1KE2 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ ::::::::::::::::::::: ::::::::::::::::::::::::::::::::: XP_016 PAGPPGKRGKRGRRGESGPPG------PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE2 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE2 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE2 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE2 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 420 430 440 450 460 470 490 500 510 520 530 540 pF1KE2 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 480 490 500 510 520 530 550 560 pF1KE2 GPMGPHGLPGPKG---------------------------------------TDGPMGPH ::::::::::::: :::::::: XP_016 GPMGPHGLPGPKGEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPH 540 550 560 570 580 590 570 580 590 600 610 620 pF1KE2 GPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVK :::::::::::::::::::::::::::: ::::::::::::::::::::::: XP_016 GPAGPKGERGEKGAMGEPGPRGPYGLPG---------FPGPRGEKGDLGEKGEKGFRGVK 600 610 620 630 640 630 640 650 pF1KE2 GEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK ::::::::::::::::::::::::::::::::: XP_016 GEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK 650 660 670 >>XP_016864226 (OMIM: 610004,616219) collagen alpha-1(XX (583 aa) initn: 4831 init1: 3444 opt: 3467 Z-score: 1427.9 bits: 274.3 E(92054): 9.2e-73 Smith-Waterman score: 3729; 90.0% identity (90.5% similar) in 571 aa overlap (120-644:3-573) 90 100 110 120 130 140 pF1KE2 QEKVERLLAQKSYEHMAKIRIAREAPSECNCP----AGPPGKRGKRGRRGESGPPGQPGP :: ::::::::::::::::::::::: XP_016 MGCPLMTMPGPPGKRGKRGRRGESGPPGQPGP 10 20 30 150 160 170 180 190 200 pF1KE2 QGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGP 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE2 RGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGL 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE2 PGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQK 160 170 180 190 200 210 330 340 350 360 370 380 pF1KE2 GEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKG 220 230 240 250 260 270 390 400 410 420 430 440 pF1KE2 KQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTL 280 290 300 310 320 330 450 460 470 480 490 500 pF1KE2 TVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLP 340 350 360 370 380 390 510 520 530 540 550 pF1KE2 GANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKG------------ :::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGVKGLKG 400 410 420 430 440 450 560 570 580 pF1KE2 ---------------------------TDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG ::::::::::::::::::::::::::::::::: XP_016 EPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 460 470 480 490 500 510 590 600 610 620 630 640 pF1KE2 LPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVKGEKG---EPGQPGLDGLDAPCQLGP :::::::::::::::::::::::::::::: .: ::.:: : :. : :::::: ::: XP_016 LPGKDGEPGLDGFPGPRGEKGDLGEKGEKGEKGKKGKKGPKGEKGEQGAPGLDAPCPLGP 520 530 540 550 560 570 650 pF1KE2 DGLPMPGCWQK : XP_016 DGLPMPGCWQK 580 >>XP_011530657 (OMIM: 610004,616219) collagen alpha-1(XX (583 aa) initn: 4831 init1: 3444 opt: 3467 Z-score: 1427.9 bits: 274.3 E(92054): 9.2e-73 Smith-Waterman score: 3729; 90.0% identity (90.5% similar) in 571 aa overlap (120-644:3-573) 90 100 110 120 130 140 pF1KE2 QEKVERLLAQKSYEHMAKIRIAREAPSECNCP----AGPPGKRGKRGRRGESGPPGQPGP :: ::::::::::::::::::::::: XP_011 MGCPLMTMPGPPGKRGKRGRRGESGPPGQPGP 10 20 30 150 160 170 180 190 200 pF1KE2 QGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGP 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE2 RGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGL 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE2 PGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQK 160 170 180 190 200 210 330 340 350 360 370 380 pF1KE2 GEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKG 220 230 240 250 260 270 390 400 410 420 430 440 pF1KE2 KQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTL 280 290 300 310 320 330 450 460 470 480 490 500 pF1KE2 TVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLP 340 350 360 370 380 390 510 520 530 540 550 pF1KE2 GANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKG------------ :::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGVKGLKG 400 410 420 430 440 450 560 570 580 pF1KE2 ---------------------------TDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG ::::::::::::::::::::::::::::::::: XP_011 EPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 460 470 480 490 500 510 590 600 610 620 630 640 pF1KE2 LPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVKGEKG---EPGQPGLDGLDAPCQLGP :::::::::::::::::::::::::::::: .: ::.:: : :. : :::::: ::: XP_011 LPGKDGEPGLDGFPGPRGEKGDLGEKGEKGEKGKKGKKGPKGEKGEQGAPGLDAPCPLGP 520 530 540 550 560 570 650 pF1KE2 DGLPMPGCWQK : XP_011 DGLPMPGCWQK 580 654 residues in 1 query sequences 64236559 residues in 92054 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Aug 1 17:01:44 2019 done: Thu Aug 1 17:01:45 2019 Total Scan time: 6.240 Total Display time: 0.120 Function used was FASTA [36.3.4 Apr, 2011]