FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2762, 323 aa 1>>>pF1KE2762 323 - 323 aa - 323 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9511+/-0.000834; mu= 17.2546+/- 0.050 mean_var=54.0338+/-10.993, 0's: 0 Z-trim(105.9): 16 B-trim: 0 in 0/48 Lambda= 0.174478 statistics sampled from 8766 (8774) to 8766 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.263), width: 16 Scan time: 1.120 The best scores are: opt bits E(33420) CCDS9956.1 DEGS2 gene_id:123099|Hs109|chr14 ( 323) 2276 580.8 5.1e-166 CCDS1540.1 DEGS1 gene_id:8560|Hs109|chr1 ( 323) 1589 407.9 5.8e-114 >>CCDS9956.1 DEGS2 gene_id:123099|Hs109|chr14 (323 aa) initn: 2276 init1: 2276 opt: 2276 Z-score: 3094.3 bits: 580.8 E(33420): 5.1e-166 Smith-Waterman score: 2276; 99.7% identity (100.0% similar) in 323 aa overlap (1-323:1-323) 10 20 30 40 50 60 pF1KE2 MGNSASRSDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLTCWL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: CCDS99 MGNSASRSDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLACWL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 VRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 AASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 AASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 AVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHPISGHFVAEHYMFLKGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 AVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHPISGHFVAEHYMFLKGH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEYYDHLPQHHSWVKVLWDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 ETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEYYDHLPQHHSWVKVLWDF 250 260 270 280 290 300 310 320 pF1KE2 VFEDSLGPYARVKRVYRLAKDGL ::::::::::::::::::::::: CCDS99 VFEDSLGPYARVKRVYRLAKDGL 310 320 >>CCDS1540.1 DEGS1 gene_id:8560|Hs109|chr1 (323 aa) initn: 1589 init1: 1589 opt: 1589 Z-score: 2159.7 bits: 407.9 E(33420): 5.8e-114 Smith-Waterman score: 1589; 65.0% identity (90.4% similar) in 314 aa overlap (1-314:1-314) 10 20 30 40 50 60 pF1KE2 MGNSASRSDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLTCWL ::. .:: :::::::::::..::.::::::: ::.::.::: : : ....::.:. . .. CCDS15 MGSRVSREDFEWVYTDQPHADRRREILAKYPEIKSLMKPDPNLIWIIIMMVLTQLGAFYI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPY :. : :.:..: :::::.:.:::.:::::.:.::::::. .: :::...:::::.:.:: CCDS15 VKDLDWKWVIFGAYAFGSCINHSMTLAIHEIAHNAAFGNCKAMWNRWFGMFANLPIGIPY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 AASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPK . :::.::.:::::::.::.:::.:: .::::::: ::..:..:::.::..::: ..:: CCDS15 SISFKRYHMDHHRYLGADGVDVDIPTDFEGWFFCTAFRKFIWVILQPLFYAFRPLFINPK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 AVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHPISGHFVAEHYMFLKGH .: .::.::..:.. :. :. . :.: .::.::.:.::::::::::::.:::::::::: CCDS15 PITYLEVINTVAQVTFDILIYYFLGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEYYDHLPQHHSWVKVLWDF :::::::::: .::::::: ::::::.::: .:::::::: ::::.::...::.:::.:: CCDS15 ETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDF 250 260 270 280 290 300 310 320 pF1KE2 VFEDSLGPYARVKRVYRLAKDGL :..:...::.:.:: CCDS15 VMDDTISPYSRMKRHQKGEMVLE 310 320 323 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Oct 3 17:23:50 2019 done: Thu Oct 3 17:23:51 2019 Total Scan time: 1.120 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]