Result of FASTA (omim) for
pF1KE3148
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3148, 362 aa
1>>>pF1KE3148 362 - 362 aa - 362 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3370+/-0.000424; mu= 17.2189+/- 0.026
mean_var=75.7267+/-15.613, 0's: 0 Z-trim(111.0): 38 B-trim: 226 in 1/52
Lambda= 0.147384
statistics sampled from 19404 (19439) to 19404 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.228), width: 16
Scan time: 7.570
The best scores are: opt bits E(85289)
NP_057479 (OMIM: 615940) very-long-chain (3R)-3-hy ( 362) 2432 526.7 3.1e-149
XP_011519966 (OMIM: 615940) PREDICTED: very-long-c ( 245) 1632 356.5 3.6e-98
NP_001010915 (OMIM: 615941) very-long-chain (3R)-3 ( 232) 663 150.5 3.7e-36
NP_001308812 (OMIM: 615941) very-long-chain (3R)-3 ( 195) 562 128.9 9.3e-30
XP_016870203 (OMIM: 615941) PREDICTED: very-long-c ( 227) 480 111.5 1.9e-24
NP_001308832 (OMIM: 615941) very-long-chain (3R)-3 ( 283) 480 111.6 2.2e-24
XP_016870202 (OMIM: 615941) PREDICTED: very-long-c ( 246) 379 90.1 5.8e-18
NP_940684 (OMIM: 615939) very-long-chain (3R)-3-hy ( 254) 378 89.9 6.9e-18
NP_055056 (OMIM: 610467) very-long-chain (3R)-3-hy ( 288) 357 85.5 1.7e-16
NP_001316712 (OMIM: 615939) very-long-chain (3R)-3 ( 277) 294 72.0 1.7e-12
NP_001316713 (OMIM: 615939) very-long-chain (3R)-3 ( 161) 282 69.3 6.7e-12
NP_001316715 (OMIM: 615939) very-long-chain (3R)-3 ( 143) 258 64.2 2.1e-10
NP_001316716 (OMIM: 615939) very-long-chain (3R)-3 ( 143) 258 64.2 2.1e-10
XP_005252698 (OMIM: 610467) PREDICTED: very-long-c ( 252) 252 63.1 7.9e-10
XP_016861345 (OMIM: 615939) PREDICTED: very-long-c ( 130) 150 41.2 0.0016
XP_011516178 (OMIM: 615941) PREDICTED: very-long-c ( 158) 147 40.6 0.0029
>>NP_057479 (OMIM: 615940) very-long-chain (3R)-3-hydrox (362 aa)
initn: 2432 init1: 2432 opt: 2432 Z-score: 2800.3 bits: 526.7 E(85289): 3.1e-149
Smith-Waterman score: 2432; 100.0% identity (100.0% similar) in 362 aa overlap (1-362:1-362)
10 20 30 40 50 60
pF1KE3 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 YDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 YDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 KAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 IPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 IPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKK
310 320 330 340 350 360
pF1KE3 IH
::
NP_057 IH
>>XP_011519966 (OMIM: 615940) PREDICTED: very-long-chain (245 aa)
initn: 1632 init1: 1632 opt: 1632 Z-score: 1883.4 bits: 356.5 E(85289): 3.6e-98
Smith-Waterman score: 1632; 100.0% identity (100.0% similar) in 245 aa overlap (118-362:1-245)
90 100 110 120 130 140
pF1KE3 QWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLNKLRLESEGSPETLTNLRK
::::::::::::::::::::::::::::::
XP_011 MELRAKEEERLNKLRLESEGSPETLTNLRK
10 20 30
150 160 170 180 190 200
pF1KE3 GYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAAI
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE3 GVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCI
100 110 120 130 140 150
270 280 290 300 310 320
pF1KE3 DMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKIKVRFSFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKIKVRFSFF
160 170 180 190 200 210
330 340 350 360
pF1KE3 LQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKKIH
:::::::::::::::::::::::::::::::::::
XP_011 LQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKKIH
220 230 240
>>NP_001010915 (OMIM: 615941) very-long-chain (3R)-3-hyd (232 aa)
initn: 559 init1: 559 opt: 663 Z-score: 770.2 bits: 150.5 E(85289): 3.7e-36
Smith-Waterman score: 663; 42.5% identity (74.9% similar) in 219 aa overlap (146-361:16-232)
120 130 140 150 160 170
pF1KE3 AEMELRAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCIL
...:::.: :.:: : ::::.:.:::: .
NP_001 MGPLALPAWLQPRYRKNAYLFIYYLIQFCGHSWIFTNMTVRFFSF
10 20 30 40
180 190 200 210 220 230
pF1KE3 GKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTM
::.:. :::.... .: .:: ....: .. .:. .. .:: ..:: : .:::... ..
NP_001 GKDSMVDTFYAIGLVMRLCQSVSLLELLHIYVGIESNHLLPRFLQLTERIIILFVVITSQ
50 60 70 80 90 100
240 250 260 270 280 290
pF1KE3 EEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAV
::.:.: :: .: .:. ... ::.. ::. : ... ::::: :::.:.::: ::::
NP_001 EEVQEKYVVCVLFVFWNLLDMVRYTYSMLSVIGISYAVLTWLSQTLWMPIYPLCVLAEAF
110 120 130 140 150 160
300 310 320 330 340 350
pF1KE3 SVIQSIPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYINFRHLYKQRRRRYG
.. ::.: :. : .: ::. ..: : . :.:::.:.:.:.:... :::..:: :
NP_001 AIYQSLPYFESFGTYSTKLPFDLSI--YFPYVLKIYLMMLFIGMYFTYSHLYSERRDILG
170 180 190 200 210 220
360
pF1KE3 Q---KKKKIH
::::.
NP_001 IFPIKKKKM
230
>>NP_001308812 (OMIM: 615941) very-long-chain (3R)-3-hyd (195 aa)
initn: 458 init1: 458 opt: 562 Z-score: 655.2 bits: 128.9 E(85289): 9.3e-30
Smith-Waterman score: 562; 40.1% identity (73.6% similar) in 197 aa overlap (168-361:1-195)
140 150 160 170 180 190
pF1KE3 SPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQML
.:::: .::.:. :::.... .: .:: .
NP_001 MTVRFFSFGKDSMVDTFYAIGLVMRLCQSV
10 20 30
200 210 220 230 240 250
pF1KE3 AVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIF
...: .. .:. .. .:: ..:: : .:::... ..::.:.: :: .: .:. ...
NP_001 SLLELLHIYVGIESNHLLPRFLQLTERIIILFVVITSQEEVQEKYVVCVLFVFWNLLDMV
40 50 60 70 80 90
260 270 280 290 300 310
pF1KE3 RYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYP
::.. ::. : ... ::::: :::.:.::: :::: .. ::.: :. : .: ::.
NP_001 RYTYSMLSVIGISYAVLTWLSQTLWMPIYPLCVLAEAFAIYQSLPYFESFGTYSTKLPF-
100 110 120 130 140
320 330 340 350 360
pF1KE3 VKIKVRFSFFLQIYLIMIFLGLYINFRHLYKQRRRRYGQ---KKKKIH
... : . :.:::.:.:.:.:... :::..:: : ::::.
NP_001 -DLSIYFPYVLKIYLMMLFIGMYFTYSHLYSERRDILGIFPIKKKKM
150 160 170 180 190
>>XP_016870203 (OMIM: 615941) PREDICTED: very-long-chain (227 aa)
initn: 480 init1: 480 opt: 480 Z-score: 560.1 bits: 111.5 E(85289): 1.9e-24
Smith-Waterman score: 480; 43.2% identity (77.7% similar) in 148 aa overlap (146-293:16-163)
120 130 140 150 160 170
pF1KE3 AEMELRAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCIL
...:::.: :.:: : ::::.:.:::: .
XP_016 MGPLALPAWLQPRYRKNAYLFIYYLIQFCGHSWIFTNMTVRFFSF
10 20 30 40
180 190 200 210 220 230
pF1KE3 GKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTM
::.:. :::.... .: .:: ....: .. .:. .. .:: ..:: : .:::... ..
XP_016 GKDSMVDTFYAIGLVMRLCQSVSLLELLHIYVGIESNHLLPRFLQLTERIIILFVVITSQ
50 60 70 80 90 100
240 250 260 270 280 290
pF1KE3 EEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAV
::.:.: :: .: .:. ... ::.. ::. : ... ::::: :::.:.::: :::
XP_016 EEVQEKYVVCVLFVFWNLLDMVRYTYSMLSVIGISYAVLTWLSQTLWMPIYPLCVLAEEA
110 120 130 140 150 160
300 310 320 330 340 350
pF1KE3 SVIQSIPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYINFRHLYKQRRRRYG
XP_016 KLKREAALHSRQNTGQKATASEAFTSLTHCHLPSINRCLILNHLALIPPSCPLTYPSISH
170 180 190 200 210 220
>>NP_001308832 (OMIM: 615941) very-long-chain (3R)-3-hyd (283 aa)
initn: 601 init1: 480 opt: 480 Z-score: 558.7 bits: 111.6 E(85289): 2.2e-24
Smith-Waterman score: 514; 33.5% identity (60.6% similar) in 251 aa overlap (146-345:16-264)
120 130 140 150 160 170
pF1KE3 AEMELRAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCIL
...:::.: :.:: : ::::.:.:::: .
NP_001 MGPLALPAWLQPRYRKNAYLFIYYLIQFCGHSWIFTNMTVRFFSF
10 20 30 40
180 190 200 210 220 230
pF1KE3 GKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTM
::.:. :::.... .: .:: ....: .. .:. .. .:: ..:: : .:::... ..
NP_001 GKDSMVDTFYAIGLVMRLCQSVSLLELLHIYVGIESNHLLPRFLQLTERIIILFVVITSQ
50 60 70 80 90 100
240 250 260 270 280 290
pF1KE3 EEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAE--
::.:.: :: .: .:. ... ::.. ::. : ... ::::: :::.:.::: :::
NP_001 EEVQEKYVVCVLFVFWNLLDMVRYTYSMLSVIGISYAVLTWLSQTLWMPIYPLCVLAEEA
110 120 130 140 150 160
300
pF1KE3 -------------------------------------------------AVSVIQSIPIF
: .. ::.: :
NP_001 KLKREAALHSRQNTGQKATASEAFTSLTHCMKPSSCRKISSGLPLILHYAFAIYQSLPYF
170 180 190 200 210 220
310 320 330 340 350 360
pF1KE3 NETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKKIH
. : .: ::. ..: : . :.:::.:.:.:.:... :
NP_001 ESFGTYSTKLPFDLSI--YFPYVLKIYLMMLFIGMYFTYSHLYSERRDILGIFPIKKKKM
230 240 250 260 270 280
>>XP_016870202 (OMIM: 615941) PREDICTED: very-long-chain (246 aa)
initn: 500 init1: 379 opt: 379 Z-score: 443.5 bits: 90.1 E(85289): 5.8e-18
Smith-Waterman score: 413; 30.6% identity (58.1% similar) in 229 aa overlap (168-345:1-227)
140 150 160 170 180 190
pF1KE3 SPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQML
.:::: .::.:. :::.... .: .:: .
XP_016 MTVRFFSFGKDSMVDTFYAIGLVMRLCQSV
10 20 30
200 210 220 230 240 250
pF1KE3 AVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIF
...: .. .:. .. .:: ..:: : .:::... ..::.:.: :: .: .:. ...
XP_016 SLLELLHIYVGIESNHLLPRFLQLTERIIILFVVITSQEEVQEKYVVCVLFVFWNLLDMV
40 50 60 70 80 90
260 270 280 290
pF1KE3 RYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAE------------------------
::.. ::. : ... ::::: :::.:.::: :::
XP_016 RYTYSMLSVIGISYAVLTWLSQTLWMPIYPLCVLAEEAKLKREAALHSRQNTGQKATASE
100 110 120 130 140 150
300 310 320
pF1KE3 ---------------------------AVSVIQSIPIFNETGRFSFTLPYPVKIKVRFSF
: .. ::.: :. : .: ::. ... : .
XP_016 AFTSLTHCMKPSSCRKISSGLPLILHYAFAIYQSLPYFESFGTYSTKLPFD--LSIYFPY
160 170 180 190 200
330 340 350 360
pF1KE3 FLQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKKIH
:.:::.:.:.:.:... :
XP_016 VLKIYLMMLFIGMYFTYSHLYSERRDILGIFPIKKKKM
210 220 230 240
>>NP_940684 (OMIM: 615939) very-long-chain (3R)-3-hydrox (254 aa)
initn: 258 init1: 194 opt: 378 Z-score: 442.2 bits: 89.9 E(85289): 6.9e-18
Smith-Waterman score: 378; 28.6% identity (65.2% similar) in 210 aa overlap (145-352:37-242)
120 130 140 150 160 170
pF1KE3 DAEMELRAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCI
: .:: .::.:. : :. . . .
NP_940 TAAAKGNGGGGGRAGAGDASGTRKKKGPGPLATAYLVIYNVVMTAG--WLVIAVGLVRAY
10 20 30 40 50 60
180 190 200 210 220 230
pF1KE3 LGKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGT
:.: :... .... . : : :..: .. :::.. : :. . .:...: :... . .
NP_940 LAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHS
70 80 90 100 110 120
240 250 260 270 280 290
pF1KE3 MEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEA
..:.:.. :.. :. ::.::::: .. .. .. : ::::.: :::.: .:
NP_940 VKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVSGEL
130 140 150 160 170 180
300 310 320 330 340 350
pF1KE3 VSVIQSIPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMI-FLGLYIN-FRHLYKQRRR
... ..:. ..: .:..:: : . :... . :::: .. .. . . :. .:::.
NP_940 LTIYAALPFVRQAGLYSISLPN--KYNFSFDYYAFLILIMISYIPIFPQLYFHMIHQRRK
190 200 210 220 230 240
360
pF1KE3 RYGQKKKKIH
NP_940 ILSHTEEHKKFE
250
>>NP_055056 (OMIM: 610467) very-long-chain (3R)-3-hydrox (288 aa)
initn: 285 init1: 230 opt: 357 Z-score: 417.3 bits: 85.5 E(85289): 1.7e-16
Smith-Waterman score: 357; 27.8% identity (61.0% similar) in 223 aa overlap (134-352:60-276)
110 120 130 140 150 160
pF1KE3 APDFDRWLDESDAEMELRAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSW
:. : . : : ..: .:.... : :
NP_055 SPTSPRCAATMASSDEDGTNGGASEAGEDREAPGERRRLGVLATAWLTFYDIAMTAG--W
30 40 50 60 70 80
170 180 190 200 210 220
pF1KE3 IFVNLT-VRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLL
. . .. ::: . : . .... . : : .:..: .. ::.. . :. . .:.
NP_055 LVLAIAMVRF-YMEKGTHRGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVIVTGVQVS
90 100 110 120 130 140
230 240 250 260 270 280
pF1KE3 GRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLW
.: :....: ... .::. : . . :.. :: ::::: .. .: . : ::...
NP_055 SRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWARYNFF
150 160 170 180 190 200
290 300 310 320 330
pF1KE3 IPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKIKVRFSFFLQIYL---IMIFLGL
: :::.: .: ... ..: ..:: ::. :: ... . .:: : . : .: :
NP_055 IILYPVGVAGELLTIYAALPHVKKTGMFSIRLPNKYNVSFDYYYFLLITMASYIPLFPQL
210 220 230 240 250 260
340 350 360
pF1KE3 YINFRHLYKQRRRRYGQKKKKIH
:. :. .:::.
NP_055 YF---HMLRQRRKVLHGEVIVEKDD
270 280
>>NP_001316712 (OMIM: 615939) very-long-chain (3R)-3-hyd (277 aa)
initn: 258 init1: 194 opt: 294 Z-score: 345.1 bits: 72.0 E(85289): 1.7e-12
Smith-Waterman score: 323; 25.8% identity (59.2% similar) in 233 aa overlap (145-352:37-265)
120 130 140 150 160 170
pF1KE3 DAEMELRAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCI
: .:: .::.:. : :. . . .
NP_001 TAAAKGNGGGGGRAGAGDASGTRKKKGPGPLATAYLVIYNVVMTAG--WLVIAVGLVRAY
10 20 30 40 50 60
180 190 200 210
pF1KE3 LGKESFYDTFHTVADMMYFCQMLAVVETI-----------------------NAAIGVTT
:.: :... .... . : : :..:.. . :::..
NP_001 LAKGSYHSLYYSIEKPLKFFQTGALLENLGQYSSHKLQRSKFGVKTIRLPILHCAIGIVP
70 80 90 100 110 120
220 230 240 250 260 270
pF1KE3 SPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDW
: :. . .:...: :... . ...:.:.. :.. :. ::.::::: .. ..
NP_001 SSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLP
130 140 150 160 170 180
280 290 300 310 320 330
pF1KE3 KVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKIKVRFSFFLQIY
.. : ::::.: :::.: .: ... ..:. ..: .:..:: : . :... .
NP_001 YLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPN--KYNFSFDYYAFLI
190 200 210 220 230 240
340 350 360
pF1KE3 LIMI-FLGLYIN-FRHLYKQRRRRYGQKKKKIH
:::: .. .. . . :. .:::.
NP_001 LIMISYIPIFPQLYFHMIHQRRKILSHTEEHKKFE
250 260 270
362 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 18 17:34:14 2016 done: Fri Nov 18 17:34:15 2016
Total Scan time: 7.570 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]