Result of FASTA (omim) for
pF1KE6234
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6234, 295 aa
1>>>pF1KE6234 295 - 295 aa - 295 aa
Library: /omim/omim.rfq.tfa
64704883 residues in 91410 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3577+/-0.000304; mu= 15.5760+/- 0.019
mean_var=88.0368+/-18.044, 0's: 0 Z-trim(117.9): 151 B-trim: 0 in 0/55
Lambda= 0.136692
statistics sampled from 31212 (31374) to 31212 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.343), width: 16
Scan time: 3.650
The best scores are: opt bits E(91410)
NP_001350539 (OMIM: 159465,614250) myelin-oligoden ( 295) 2012 406.5 3.5e-113
NP_996532 (OMIM: 159465,614250) myelin-oligodendro ( 247) 1667 338.4 9.2e-93
NP_002424 (OMIM: 159465,614250) myelin-oligodendro ( 252) 1660 337.0 2.4e-92
NP_001008230 (OMIM: 159465,614250) myelin-oligoden ( 206) 1333 272.4 5.4e-73
NP_996535 (OMIM: 159465,614250) myelin-oligodendro ( 208) 1333 272.4 5.4e-73
NP_001008229 (OMIM: 159465,614250) myelin-oligoden ( 224) 1332 272.3 6.6e-73
NP_996534 (OMIM: 159465,614250) myelin-oligodendro ( 229) 1332 272.3 6.7e-73
NP_996533 (OMIM: 159465,614250) myelin-oligodendro ( 213) 1331 272.1 7.3e-73
NP_996537 (OMIM: 159465,614250) myelin-oligodendro ( 131) 678 143.1 3e-34
NP_001723 (OMIM: 601610) butyrophilin subfamily 1 ( 526) 461 100.8 6.3e-21
XP_011512572 (OMIM: 613594) butyrophilin subfamily ( 240) 456 99.5 7e-21
XP_011512573 (OMIM: 613594) butyrophilin subfamily ( 240) 456 99.5 7e-21
XP_016865704 (OMIM: 613594) butyrophilin subfamily ( 240) 456 99.5 7e-21
XP_005249397 (OMIM: 601610) butyrophilin subfamily ( 626) 461 100.9 7.1e-21
XP_006715046 (OMIM: 613593) butyrophilin subfamily ( 419) 433 95.2 2.4e-19
NP_001153180 (OMIM: 615606) butyrophilin-like prot ( 340) 399 88.4 2.2e-17
NP_079126 (OMIM: 615606) butyrophilin-like protein ( 347) 399 88.5 2.2e-17
XP_011532951 (OMIM: 615606) butyrophilin-like prot ( 462) 399 88.6 2.7e-17
NP_001035552 (OMIM: 615606) butyrophilin-like prot ( 500) 399 88.6 2.9e-17
NP_001184169 (OMIM: 613591) butyrophilin subfamily ( 256) 391 86.8 5.3e-17
NP_001138480 (OMIM: 613593) butyrophilin subfamily ( 461) 390 86.8 9.3e-17
NP_932079 (OMIM: 606192) butyrophilin-like protein ( 466) 388 86.4 1.2e-16
XP_016865706 (OMIM: 613594) butyrophilin subfamily ( 198) 381 84.7 1.7e-16
NP_919423 (OMIM: 613593) butyrophilin subfamily 3 ( 352) 380 84.7 3e-16
XP_005248891 (OMIM: 613593) butyrophilin subfamily ( 352) 380 84.7 3e-16
NP_001138481 (OMIM: 613593) butyrophilin subfamily ( 378) 380 84.7 3.2e-16
XP_005248888 (OMIM: 613594) butyrophilin subfamily ( 267) 377 84.0 3.7e-16
XP_005248889 (OMIM: 613594) butyrophilin subfamily ( 267) 377 84.0 3.7e-16
XP_005248890 (OMIM: 613593) butyrophilin subfamily ( 506) 380 84.9 3.9e-16
NP_008979 (OMIM: 613593) butyrophilin subfamily 3 ( 513) 380 84.9 4e-16
XP_016865701 (OMIM: 613594) butyrophilin subfamily ( 334) 377 84.1 4.3e-16
XP_005248884 (OMIM: 613594) butyrophilin subfamily ( 334) 377 84.1 4.3e-16
NP_001184175 (OMIM: 613594) butyrophilin subfamily ( 334) 377 84.1 4.3e-16
XP_016865700 (OMIM: 613594) butyrophilin subfamily ( 334) 377 84.1 4.3e-16
NP_008978 (OMIM: 613594) butyrophilin subfamily 3 ( 334) 377 84.1 4.3e-16
NP_001184176 (OMIM: 613594) butyrophilin subfamily ( 334) 377 84.1 4.3e-16
XP_006715044 (OMIM: 613594) butyrophilin subfamily ( 339) 377 84.1 4.4e-16
XP_006715043 (OMIM: 613594) butyrophilin subfamily ( 339) 377 84.1 4.4e-16
XP_011512569 (OMIM: 613594) butyrophilin subfamily ( 339) 377 84.1 4.4e-16
XP_006715042 (OMIM: 613594) butyrophilin subfamily ( 339) 377 84.1 4.4e-16
XP_011538873 (OMIM: 111620,111750,609017) erythroi ( 468) 371 83.0 1.3e-15
XP_011538872 (OMIM: 111620,111750,609017) erythroi ( 475) 371 83.1 1.3e-15
NP_001017922 (OMIM: 111620,111750,609017) erythroi ( 475) 371 83.1 1.3e-15
NP_061008 (OMIM: 111620,111750,609017) erythroid m ( 475) 371 83.1 1.3e-15
XP_006710376 (OMIM: 111620,111750,609017) erythroi ( 475) 371 83.1 1.3e-15
NP_008925 (OMIM: 613595) butyrophilin subfamily 3 ( 584) 372 83.3 1.3e-15
NP_001184167 (OMIM: 613591) butyrophilin subfamily ( 336) 369 82.5 1.3e-15
XP_006715018 (OMIM: 613591) butyrophilin subfamily ( 353) 369 82.5 1.4e-15
XP_016865657 (OMIM: 613591) butyrophilin subfamily ( 353) 369 82.5 1.4e-15
XP_016865658 (OMIM: 613591) butyrophilin subfamily ( 353) 369 82.5 1.4e-15
>>NP_001350539 (OMIM: 159465,614250) myelin-oligodendroc (295 aa)
initn: 2012 init1: 2012 opt: 2012 Z-score: 2153.6 bits: 406.5 E(91410): 3.5e-113
Smith-Waterman score: 2012; 99.7% identity (100.0% similar) in 295 aa overlap (1-295:1-295)
10 20 30 40 50 60
pF1KE6 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLVFLCLQY
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
NP_001 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLIFLCLQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 RLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQFL
190 200 210 220 230 240
250 260 270 280 290
pF1KE6 EELRKFSSLCYKQRIKSQERETEATRGRGGLLRDHIPRGKEELESLGGGKTPPGR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EELRKFSSLCYKQRIKSQERETEATRGRGGLLRDHIPRGKEELESLGGGKTPPGR
250 260 270 280 290
>>NP_996532 (OMIM: 159465,614250) myelin-oligodendrocyte (247 aa)
initn: 1667 init1: 1667 opt: 1667 Z-score: 1786.9 bits: 338.4 E(91410): 9.2e-93
Smith-Waterman score: 1667; 99.6% identity (100.0% similar) in 244 aa overlap (1-244:1-244)
10 20 30 40 50 60
pF1KE6 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLVFLCLQY
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
NP_996 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLIFLCLQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 RLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 RLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQFL
190 200 210 220 230 240
250 260 270 280 290
pF1KE6 EELRKFSSLCYKQRIKSQERETEATRGRGGLLRDHIPRGKEELESLGGGKTPPGR
::::
NP_996 EELRNPF
>>NP_002424 (OMIM: 159465,614250) myelin-oligodendrocyte (252 aa)
initn: 1660 init1: 1660 opt: 1660 Z-score: 1779.4 bits: 337.0 E(91410): 2.4e-92
Smith-Waterman score: 1660; 99.6% identity (100.0% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
pF1KE6 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLVFLCLQY
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
NP_002 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLIFLCLQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 RLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQFL
190 200 210 220 230 240
250 260 270 280 290
pF1KE6 EELRKFSSLCYKQRIKSQERETEATRGRGGLLRDHIPRGKEELESLGGGKTPPGR
:::
NP_002 EELLFHLEALSG
250
>>NP_001008230 (OMIM: 159465,614250) myelin-oligodendroc (206 aa)
initn: 1330 init1: 1330 opt: 1333 Z-score: 1432.0 bits: 272.4 E(91410): 5.4e-73
Smith-Waterman score: 1333; 98.0% identity (99.0% similar) in 201 aa overlap (1-201:1-201)
10 20 30 40 50 60
pF1KE6 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLVFLCLQY
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
NP_001 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLIFLCLQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 RLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQFL
::::::::::::::::: :.
NP_001 RLRGKLRAEIENLHRTFVFHLEALSG
190 200
>>NP_996535 (OMIM: 159465,614250) myelin-oligodendrocyte (208 aa)
initn: 1330 init1: 1330 opt: 1333 Z-score: 1431.9 bits: 272.4 E(91410): 5.4e-73
Smith-Waterman score: 1333; 96.1% identity (97.1% similar) in 207 aa overlap (1-205:1-207)
10 20 30 40 50 60
pF1KE6 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLVFLCLQY
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
NP_996 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLIFLCLQY
130 140 150 160 170 180
190 200 210 220 230
pF1KE6 RLRGKLRAEIENLHRTFDPHF--LRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQ
::::::::::::::::: . :: :
NP_996 RLRGKLRAEIENLHRTFGQFLEELRNPF
190 200
>>NP_001008229 (OMIM: 159465,614250) myelin-oligodendroc (224 aa)
initn: 1370 init1: 1332 opt: 1332 Z-score: 1430.5 bits: 272.3 E(91410): 6.6e-73
Smith-Waterman score: 1341; 85.7% identity (87.7% similar) in 244 aa overlap (1-244:1-221)
10 20 30 40 50 60
pF1KE6 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLVFLCLQY
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
NP_001 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLIFLCLQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 RLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQFL
:::::::::::::::::. :::: : . . .::::
NP_001 RLRGKLRAEIENLHRTFESF---------------GVLGPQVK--------EPKKTGQFL
190 200 210
250 260 270 280 290
pF1KE6 EELRKFSSLCYKQRIKSQERETEATRGRGGLLRDHIPRGKEELESLGGGKTPPGR
::::
NP_001 EELRNPF
220
>>NP_996534 (OMIM: 159465,614250) myelin-oligodendrocyte (229 aa)
initn: 1363 init1: 1332 opt: 1332 Z-score: 1430.3 bits: 272.3 E(91410): 6.7e-73
Smith-Waterman score: 1334; 85.6% identity (87.7% similar) in 243 aa overlap (1-243:1-220)
10 20 30 40 50 60
pF1KE6 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLVFLCLQY
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
NP_996 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLIFLCLQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 RLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQFL
:::::::::::::::::. :::: : . . .::::
NP_996 RLRGKLRAEIENLHRTFESF---------------GVLGPQVK--------EPKKTGQFL
190 200 210
250 260 270 280 290
pF1KE6 EELRKFSSLCYKQRIKSQERETEATRGRGGLLRDHIPRGKEELESLGGGKTPPGR
:::
NP_996 EELLFHLEALSG
220
>>NP_996533 (OMIM: 159465,614250) myelin-oligodendrocyte (213 aa)
initn: 1330 init1: 1330 opt: 1331 Z-score: 1429.7 bits: 272.1 E(91410): 7.3e-73
Smith-Waterman score: 1331; 98.0% identity (99.0% similar) in 202 aa overlap (1-202:1-201)
10 20 30 40 50 60
pF1KE6 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLVFLCLQY
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
NP_996 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLIFLCLQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 RLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRLAGQFL
::::::::::::::::: .::
NP_996 RLRGKLRAEIENLHRTFG-QFLEELLFHLEALSG
190 200 210
>>NP_996537 (OMIM: 159465,614250) myelin-oligodendrocyte (131 aa)
initn: 693 init1: 678 opt: 678 Z-score: 736.5 bits: 143.1 E(91410): 3e-34
Smith-Waterman score: 678; 99.0% identity (100.0% similar) in 99 aa overlap (146-244:30-128)
120 130 140 150 160 170
pF1KE6 NVRFSDEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLVF
::::::::::::::::::::::::::::.:
NP_996 MASLSRPSLPSCLCSFLLLLLLQVSSSYADPFYWVSPGVLVLLAVLPVLLLQITVGLIF
10 20 30 40 50
180 190 200 210 220 230
pF1KE6 LCLQYRLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 LCLQYRLRGKLRAEIENLHRTFDPHFLRVPCWKITLFVIVPVLGPLVALIICYNWLHRRL
60 70 80 90 100 110
240 250 260 270 280 290
pF1KE6 AGQFLEELRKFSSLCYKQRIKSQERETEATRGRGGLLRDHIPRGKEELESLGGGKTPPGR
:::::::::
NP_996 AGQFLEELRNPF
120 130
>>NP_001723 (OMIM: 601610) butyrophilin subfamily 1 memb (526 aa)
initn: 438 init1: 438 opt: 461 Z-score: 497.3 bits: 100.8 E(91410): 6.3e-21
Smith-Waterman score: 461; 47.9% identity (77.1% similar) in 144 aa overlap (1-144:1-141)
10 20 30 40 50 60
pF1KE6 MASLSRPSLPSCLCSFLLLLLLQVSSSYAGQFRVIGPRHPIRALVGDEVELPCRISPGKN
:: . .:: :: : :.:::. . .. : :::: .:: :.::...:::::.::. .
NP_001 MAVFPSSGLPRCL---LTLILLQLPKLDSAPFDVIGPPEPILAVVGEDAELPCRLSPNAS
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 ATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFS
: .:. :.: : .: ..:.:..:...: ::::::. :..:.:..:.:.::::.:: :
NP_001 AEHLELRWFRKKVSPAVLVHRDGREQEAEQMPEYRGRATLVQDGIAKGRVALRIRGVRVS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE6 DEGGFTCFFRDHSYQEEAAMELKVEDPFYWVSPGVLVLLAVLPVLLLQITVGLVFLCLQY
:.: .:::::. . ::: ..:::
NP_001 DDGEYTCFFREDGSYEEALVHLKVAALGSDPHISMQVQENGEICLECTSVGWYPEPQVQW
120 130 140 150 160 170
295 residues in 1 query sequences
64704883 residues in 91410 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Jul 20 18:03:33 2018 done: Fri Jul 20 18:03:34 2018
Total Scan time: 3.650 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]