Result of FASTA (omim) for
pF1KE6669
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6669, 296 aa
1>>>pF1KE6669 296 - 296 aa - 296 aa
Library: /omim/omim.rfq.tfa
64369986 residues in 92320 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9676+/-0.000354; mu= 11.3280+/- 0.022
mean_var=64.2859+/-12.995, 0's: 0 Z-trim(113.0): 27 B-trim: 28 in 1/50
Lambda= 0.159962
statistics sampled from 22984 (22990) to 22984 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.249), width: 16
Scan time: 3.640
The best scores are: opt bits E(92320)
XP_024302635 (OMIM: 109750,614156) biliverdin redu ( 296) 1922 452.4 5.4e-127
NP_001240752 (OMIM: 109750,614156) biliverdin redu ( 296) 1922 452.4 5.4e-127
NP_000703 (OMIM: 109750,614156) biliverdin reducta ( 296) 1922 452.4 5.4e-127
XP_016868009 (OMIM: 109750,614156) biliverdin redu ( 296) 1922 452.4 5.4e-127
XP_011513776 (OMIM: 109750,614156) biliverdin redu ( 296) 1922 452.4 5.4e-127
>>XP_024302635 (OMIM: 109750,614156) biliverdin reductas (296 aa)
initn: 1922 init1: 1922 opt: 1922 Z-score: 2401.5 bits: 452.4 E(92320): 5.4e-127
Smith-Waterman score: 1922; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:1-296)
10 20 30 40 50 60
pF1KE6 MNAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVSRRELGSIDGVQQISLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 MNAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVSRRELGSIDGVQQISLE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DALSSQEVEVAYICSESSSHEDYIRQFLNAGKHVLVEYPMTLSLAAAQELWELAEQKGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 DALSSQEVEVAYICSESSSHEDYIRQFLNAGKHVLVEYPMTLSLAAAQELWELAEQKGKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LHEEHVELLMEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LHEEHVELLMEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 GELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLEN
190 200 210 220 230 240
250 260 270 280 290
pF1KE6 VPNVGVNKNIFLKDQNIFVQKLLGQFSEKELAAEKKRILHCLGLAEEIQKYCCSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VPNVGVNKNIFLKDQNIFVQKLLGQFSEKELAAEKKRILHCLGLAEEIQKYCCSRK
250 260 270 280 290
>>NP_001240752 (OMIM: 109750,614156) biliverdin reductas (296 aa)
initn: 1922 init1: 1922 opt: 1922 Z-score: 2401.5 bits: 452.4 E(92320): 5.4e-127
Smith-Waterman score: 1922; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:1-296)
10 20 30 40 50 60
pF1KE6 MNAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVSRRELGSIDGVQQISLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVSRRELGSIDGVQQISLE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DALSSQEVEVAYICSESSSHEDYIRQFLNAGKHVLVEYPMTLSLAAAQELWELAEQKGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DALSSQEVEVAYICSESSSHEDYIRQFLNAGKHVLVEYPMTLSLAAAQELWELAEQKGKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LHEEHVELLMEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHEEHVELLMEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLEN
190 200 210 220 230 240
250 260 270 280 290
pF1KE6 VPNVGVNKNIFLKDQNIFVQKLLGQFSEKELAAEKKRILHCLGLAEEIQKYCCSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPNVGVNKNIFLKDQNIFVQKLLGQFSEKELAAEKKRILHCLGLAEEIQKYCCSRK
250 260 270 280 290
>>NP_000703 (OMIM: 109750,614156) biliverdin reductase A (296 aa)
initn: 1922 init1: 1922 opt: 1922 Z-score: 2401.5 bits: 452.4 E(92320): 5.4e-127
Smith-Waterman score: 1922; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:1-296)
10 20 30 40 50 60
pF1KE6 MNAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVSRRELGSIDGVQQISLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MNAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVSRRELGSIDGVQQISLE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DALSSQEVEVAYICSESSSHEDYIRQFLNAGKHVLVEYPMTLSLAAAQELWELAEQKGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DALSSQEVEVAYICSESSSHEDYIRQFLNAGKHVLVEYPMTLSLAAAQELWELAEQKGKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LHEEHVELLMEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LHEEHVELLMEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLEN
190 200 210 220 230 240
250 260 270 280 290
pF1KE6 VPNVGVNKNIFLKDQNIFVQKLLGQFSEKELAAEKKRILHCLGLAEEIQKYCCSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VPNVGVNKNIFLKDQNIFVQKLLGQFSEKELAAEKKRILHCLGLAEEIQKYCCSRK
250 260 270 280 290
>>XP_016868009 (OMIM: 109750,614156) biliverdin reductas (296 aa)
initn: 1922 init1: 1922 opt: 1922 Z-score: 2401.5 bits: 452.4 E(92320): 5.4e-127
Smith-Waterman score: 1922; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:1-296)
10 20 30 40 50 60
pF1KE6 MNAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVSRRELGSIDGVQQISLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVSRRELGSIDGVQQISLE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DALSSQEVEVAYICSESSSHEDYIRQFLNAGKHVLVEYPMTLSLAAAQELWELAEQKGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DALSSQEVEVAYICSESSSHEDYIRQFLNAGKHVLVEYPMTLSLAAAQELWELAEQKGKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LHEEHVELLMEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHEEHVELLMEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLEN
190 200 210 220 230 240
250 260 270 280 290
pF1KE6 VPNVGVNKNIFLKDQNIFVQKLLGQFSEKELAAEKKRILHCLGLAEEIQKYCCSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPNVGVNKNIFLKDQNIFVQKLLGQFSEKELAAEKKRILHCLGLAEEIQKYCCSRK
250 260 270 280 290
>>XP_011513776 (OMIM: 109750,614156) biliverdin reductas (296 aa)
initn: 1922 init1: 1922 opt: 1922 Z-score: 2401.5 bits: 452.4 E(92320): 5.4e-127
Smith-Waterman score: 1922; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:1-296)
10 20 30 40 50 60
pF1KE6 MNAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVSRRELGSIDGVQQISLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVSRRELGSIDGVQQISLE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DALSSQEVEVAYICSESSSHEDYIRQFLNAGKHVLVEYPMTLSLAAAQELWELAEQKGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DALSSQEVEVAYICSESSSHEDYIRQFLNAGKHVLVEYPMTLSLAAAQELWELAEQKGKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LHEEHVELLMEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHEEHVELLMEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLEN
190 200 210 220 230 240
250 260 270 280 290
pF1KE6 VPNVGVNKNIFLKDQNIFVQKLLGQFSEKELAAEKKRILHCLGLAEEIQKYCCSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPNVGVNKNIFLKDQNIFVQKLLGQFSEKELAAEKKRILHCLGLAEEIQKYCCSRK
250 260 270 280 290
296 residues in 1 query sequences
64369986 residues in 92320 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Oct 24 21:41:08 2019 done: Thu Oct 24 21:41:09 2019
Total Scan time: 3.640 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]