Result of FASTA (omim) for
pF1KE9251
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9251, 561 aa
1>>>pF1KE9251 561 - 561 aa - 561 aa
Library: /omim/omim.rfq.tfa
64236559 residues in 92054 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.1329+/-0.000338; mu= 2.4217+/- 0.021
mean_var=216.8521+/-43.327, 0's: 0 Z-trim(122.0): 11 B-trim: 0 in 0/53
Lambda= 0.087095
statistics sampled from 40936 (40947) to 40936 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.445), width: 16
Scan time: 5.950
The best scores are: opt bits E(92054)
NP_079358 (OMIM: 611510) centromere protein T [Hom ( 561) 3711 479.0 1.9e-134
XP_024306224 (OMIM: 611510) centromere protein T i ( 458) 3051 396.0 1.5e-109
XP_024306223 (OMIM: 611510) centromere protein T i ( 458) 3051 396.0 1.5e-109
XP_024306225 (OMIM: 611510) centromere protein T i ( 458) 3051 396.0 1.5e-109
XP_011521647 (OMIM: 611510) centromere protein T i ( 314) 2096 275.9 1.4e-73
XP_016879206 (OMIM: 611510) centromere protein T i ( 314) 2096 275.9 1.4e-73
XP_024306226 (OMIM: 611510) centromere protein T i ( 319) 1815 240.6 6.2e-63
XP_016879204 (OMIM: 611510) centromere protein T i ( 319) 1815 240.6 6.2e-63
>>NP_079358 (OMIM: 611510) centromere protein T [Homo sa (561 aa)
initn: 3711 init1: 3711 opt: 3711 Z-score: 2535.5 bits: 479.0 E(92054): 1.9e-134
Smith-Waterman score: 3711; 100.0% identity (100.0% similar) in 561 aa overlap (1-561:1-561)
10 20 30 40 50 60
pF1KE9 MADHNPDSDSTPRTLLRRVLDTADPRTPRRPRSARAGARRALLETASPRKLSGQTRTIAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 MADHNPDSDSTPRTLLRRVLDTADPRTPRRPRSARAGARRALLETASPRKLSGQTRTIAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 GRSHGARSVGRSAHIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 GRSHGARSVGRSAHIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 SRQESSCGSLELQLPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 SRQESSCGSLELQLPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 DASSLTRSLNLTFATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 DASSLTRSLNLTFATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLED
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 TQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 TQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 EEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 EEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 AEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 AEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 PAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 PAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKAL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 EMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 EMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLP
490 500 510 520 530 540
550 560
pF1KE9 LEYRQLLIPCAYSGNSVFPAQ
:::::::::::::::::::::
NP_079 LEYRQLLIPCAYSGNSVFPAQ
550 560
>>XP_024306224 (OMIM: 611510) centromere protein T isofo (458 aa)
initn: 3051 init1: 3051 opt: 3051 Z-score: 2088.5 bits: 396.0 E(92054): 1.5e-109
Smith-Waterman score: 3051; 100.0% identity (100.0% similar) in 458 aa overlap (104-561:1-458)
80 90 100 110 120 130
pF1KE9 HIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQPSRQESSCGSLELQ
::::::::::::::::::::::::::::::
XP_024 MPESVVKPVPAPQAVQPSRQESSCGSLELQ
10 20 30
140 150 160 170 180 190
pF1KE9 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE9 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
100 110 120 130 140 150
260 270 280 290 300 310
pF1KE9 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
160 170 180 190 200 210
320 330 340 350 360 370
pF1KE9 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
220 230 240 250 260 270
380 390 400 410 420 430
pF1KE9 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
280 290 300 310 320 330
440 450 460 470 480 490
pF1KE9 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
340 350 360 370 380 390
500 510 520 530 540 550
pF1KE9 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
400 410 420 430 440 450
560
pF1KE9 GNSVFPAQ
::::::::
XP_024 GNSVFPAQ
>>XP_024306223 (OMIM: 611510) centromere protein T isofo (458 aa)
initn: 3051 init1: 3051 opt: 3051 Z-score: 2088.5 bits: 396.0 E(92054): 1.5e-109
Smith-Waterman score: 3051; 100.0% identity (100.0% similar) in 458 aa overlap (104-561:1-458)
80 90 100 110 120 130
pF1KE9 HIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQPSRQESSCGSLELQ
::::::::::::::::::::::::::::::
XP_024 MPESVVKPVPAPQAVQPSRQESSCGSLELQ
10 20 30
140 150 160 170 180 190
pF1KE9 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE9 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
100 110 120 130 140 150
260 270 280 290 300 310
pF1KE9 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
160 170 180 190 200 210
320 330 340 350 360 370
pF1KE9 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
220 230 240 250 260 270
380 390 400 410 420 430
pF1KE9 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
280 290 300 310 320 330
440 450 460 470 480 490
pF1KE9 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
340 350 360 370 380 390
500 510 520 530 540 550
pF1KE9 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
400 410 420 430 440 450
560
pF1KE9 GNSVFPAQ
::::::::
XP_024 GNSVFPAQ
>>XP_024306225 (OMIM: 611510) centromere protein T isofo (458 aa)
initn: 3051 init1: 3051 opt: 3051 Z-score: 2088.5 bits: 396.0 E(92054): 1.5e-109
Smith-Waterman score: 3051; 100.0% identity (100.0% similar) in 458 aa overlap (104-561:1-458)
80 90 100 110 120 130
pF1KE9 HIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQPSRQESSCGSLELQ
::::::::::::::::::::::::::::::
XP_024 MPESVVKPVPAPQAVQPSRQESSCGSLELQ
10 20 30
140 150 160 170 180 190
pF1KE9 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNADASSLTRSLNLTF
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE9 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 ATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPN
100 110 120 130 140 150
260 270 280 290 300 310
pF1KE9 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLST
160 170 180 190 200 210
320 330 340 350 360 370
pF1KE9 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 SSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGS
220 230 240 250 260 270
380 390 400 410 420 430
pF1KE9 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 QGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPA
280 290 300 310 320 330
440 450 460 470 480 490
pF1KE9 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 EPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQH
340 350 360 370 380 390
500 510 520 530 540 550
pF1KE9 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYS
400 410 420 430 440 450
560
pF1KE9 GNSVFPAQ
::::::::
XP_024 GNSVFPAQ
>>XP_011521647 (OMIM: 611510) centromere protein T isofo (314 aa)
initn: 2096 init1: 2096 opt: 2096 Z-score: 1442.4 bits: 275.9 E(92054): 1.4e-73
Smith-Waterman score: 2096; 100.0% identity (100.0% similar) in 314 aa overlap (248-561:1-314)
220 230 240 250 260 270
pF1KE9 DVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKT
::::::::::::::::::::::::::::::
XP_011 MVGSPNVYHSLPCTPHTGAEDAEQAAGRKT
10 20 30
280 290 300 310 320 330
pF1KE9 QSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKM
40 50 60 70 80 90
340 350 360 370 380 390
pF1KE9 EEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAAS
100 110 120 130 140 150
400 410 420 430 440 450
pF1KE9 PESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHK
160 170 180 190 200 210
460 470 480 490 500 510
pF1KE9 AGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLEL
220 230 240 250 260 270
520 530 540 550 560
pF1KE9 LMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNSVFPAQ
::::::::::::::::::::::::::::::::::::::::::::
XP_011 LMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNSVFPAQ
280 290 300 310
>>XP_016879206 (OMIM: 611510) centromere protein T isofo (314 aa)
initn: 2096 init1: 2096 opt: 2096 Z-score: 1442.4 bits: 275.9 E(92054): 1.4e-73
Smith-Waterman score: 2096; 100.0% identity (100.0% similar) in 314 aa overlap (248-561:1-314)
220 230 240 250 260 270
pF1KE9 DVGAFLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKT
::::::::::::::::::::::::::::::
XP_016 MVGSPNVYHSLPCTPHTGAEDAEQAAGRKT
10 20 30
280 290 300 310 320 330
pF1KE9 QSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKM
40 50 60 70 80 90
340 350 360 370 380 390
pF1KE9 EEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAAS
100 110 120 130 140 150
400 410 420 430 440 450
pF1KE9 PESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHK
160 170 180 190 200 210
460 470 480 490 500 510
pF1KE9 AGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLEL
220 230 240 250 260 270
520 530 540 550 560
pF1KE9 LMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNSVFPAQ
::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNSVFPAQ
280 290 300 310
>>XP_024306226 (OMIM: 611510) centromere protein T isofo (319 aa)
initn: 1815 init1: 1815 opt: 1815 Z-score: 1251.4 bits: 240.6 E(92054): 6.2e-63
Smith-Waterman score: 1815; 99.3% identity (100.0% similar) in 275 aa overlap (287-561:45-319)
260 270 280 290 300 310
pF1KE9 SLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSG
..::::::::::::::::::::::::::::
XP_024 RTGSAGPSLPFSELCSLGLLRLRPVFSPLHSGPGKPAQFLAGEAEEVNAFALGFLSTSSG
20 30 40 50 60 70
320 330 340 350 360 370
pF1KE9 VSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGT
80 90 100 110 120 130
380 390 400 410 420 430
pF1KE9 AEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 AEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPL
140 150 160 170 180 190
440 450 460 470 480 490
pF1KE9 LVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 LVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCD
200 210 220 230 240 250
500 510 520 530 540 550
pF1KE9 DLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 DLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNS
260 270 280 290 300 310
560
pF1KE9 VFPAQ
:::::
XP_024 VFPAQ
>>XP_016879204 (OMIM: 611510) centromere protein T isofo (319 aa)
initn: 1815 init1: 1815 opt: 1815 Z-score: 1251.4 bits: 240.6 E(92054): 6.2e-63
Smith-Waterman score: 1815; 99.3% identity (100.0% similar) in 275 aa overlap (287-561:45-319)
260 270 280 290 300 310
pF1KE9 SLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSG
..::::::::::::::::::::::::::::
XP_016 RTGSAGPSLPFSELCSLGLLRLRPVFSPLHSGPGKPAQFLAGEAEEVNAFALGFLSTSSG
20 30 40 50 60 70
320 330 340 350 360 370
pF1KE9 VSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGT
80 90 100 110 120 130
380 390 400 410 420 430
pF1KE9 AEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPL
140 150 160 170 180 190
440 450 460 470 480 490
pF1KE9 LVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCD
200 210 220 230 240 250
500 510 520 530 540 550
pF1KE9 DLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNS
260 270 280 290 300 310
560
pF1KE9 VFPAQ
:::::
XP_016 VFPAQ
561 residues in 1 query sequences
64236559 residues in 92054 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Aug 1 17:03:36 2019 done: Thu Aug 1 17:03:37 2019
Total Scan time: 5.950 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]