Result of FASTA (omim) for
pF1KF0405
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KF0405, 402 aa
1>>>pF1KF0405 402 - 402 aa - 402 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0780+/-0.00037; mu= 18.0219+/- 0.023
mean_var=63.2233+/-13.059, 0's: 0 Z-trim(111.9): 32 B-trim: 0 in 0/51
Lambda= 0.161300
statistics sampled from 20648 (20679) to 20648 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.242), width: 16
Scan time: 8.340
The best scores are: opt bits E(85289)
NP_663624 (OMIM: 110800,116700,600429) N-acetyllac ( 402) 2751 649.1 5.6e-186
XP_006715115 (OMIM: 110800,116700,600429) PREDICTE ( 402) 2751 649.1 5.6e-186
XP_005249056 (OMIM: 110800,116700,600429) PREDICTE ( 325) 2239 529.9 3.5e-150
XP_016866221 (OMIM: 110800,116700,600429) PREDICTE ( 318) 2077 492.2 7.6e-139
XP_011512770 (OMIM: 110800,116700,600429) PREDICTE ( 318) 2077 492.2 7.6e-139
NP_663630 (OMIM: 110800,116700,600429) N-acetyllac ( 402) 2047 485.3 1.2e-136
NP_001482 (OMIM: 110800,116700,600429) N-acetyllac ( 400) 2014 477.6 2.4e-134
XP_011512768 (OMIM: 110800,116700,600429) PREDICTE ( 339) 1387 331.6 1.7e-90
XP_005249054 (OMIM: 110800,116700,600429) PREDICTE ( 363) 1332 318.8 1.3e-86
NP_004742 (OMIM: 606836) beta-1,3-galactosyl-O-gly ( 438) 984 237.9 3.6e-62
NP_057675 (OMIM: 616782) beta-1,3-galactosyl-O-gly ( 453) 969 234.4 4.2e-61
NP_001091102 (OMIM: 600391) beta-1,3-galactosyl-O- ( 428) 921 223.2 9.2e-58
NP_001091103 (OMIM: 600391) beta-1,3-galactosyl-O- ( 428) 921 223.2 9.2e-58
NP_001481 (OMIM: 600391) beta-1,3-galactosyl-O-gly ( 428) 921 223.2 9.2e-58
XP_016870109 (OMIM: 600391) PREDICTED: beta-1,3-ga ( 428) 921 223.2 9.2e-58
XP_016870110 (OMIM: 600391) PREDICTED: beta-1,3-ga ( 428) 921 223.2 9.2e-58
NP_001091105 (OMIM: 600391) beta-1,3-galactosyl-O- ( 428) 921 223.2 9.2e-58
NP_001091104 (OMIM: 600391) beta-1,3-galactosyl-O- ( 428) 921 223.2 9.2e-58
XP_005257629 (OMIM: 264800,605822,608125) PREDICTE ( 833) 307 80.5 1.6e-14
NP_071450 (OMIM: 264800,605822,608125) xylosyltran ( 865) 307 80.5 1.7e-14
XP_016879029 (OMIM: 264800,608124,615777) PREDICTE ( 870) 264 70.5 1.7e-11
XP_016879028 (OMIM: 264800,608124,615777) PREDICTE ( 872) 264 70.5 1.7e-11
NP_071449 (OMIM: 264800,608124,615777) xylosyltran ( 959) 264 70.6 1.9e-11
>>NP_663624 (OMIM: 110800,116700,600429) N-acetyllactosa (402 aa)
initn: 2751 init1: 2751 opt: 2751 Z-score: 3459.9 bits: 649.1 E(85289): 5.6e-186
Smith-Waterman score: 2751; 100.0% identity (100.0% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KF0 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_663 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KF0 TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_663 TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KF0 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_663 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KF0 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_663 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KF0 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_663 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KF0 WVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_663 WVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
310 320 330 340 350 360
370 380 390 400
pF1KF0 PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
::::::::::::::::::::::::::::::::::::::::::
NP_663 PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
370 380 390 400
>>XP_006715115 (OMIM: 110800,116700,600429) PREDICTED: N (402 aa)
initn: 2751 init1: 2751 opt: 2751 Z-score: 3459.9 bits: 649.1 E(85289): 5.6e-186
Smith-Waterman score: 2751; 100.0% identity (100.0% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KF0 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KF0 TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KF0 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KF0 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KF0 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KF0 WVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
310 320 330 340 350 360
370 380 390 400
pF1KF0 PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
::::::::::::::::::::::::::::::::::::::::::
XP_006 PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
370 380 390 400
>>XP_005249056 (OMIM: 110800,116700,600429) PREDICTED: N (325 aa)
initn: 2239 init1: 2239 opt: 2239 Z-score: 2817.3 bits: 529.9 E(85289): 3.5e-150
Smith-Waterman score: 2239; 100.0% identity (100.0% similar) in 325 aa overlap (78-402:1-325)
50 60 70 80 90 100
pF1KF0 ACHQIFEGKVFYPTENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDF
::::::::::::::::::::::::::::::
XP_005 MVRSHYVTETLSEEEAGFPLAYTVTIHKDF
10 20 30
110 120 130 140 150 160
pF1KF0 GTFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GTFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KF0 QADLNCLEDLVASEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QADLNCLEDLVASEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVG
100 110 120 130 140 150
230 240 250 260 270 280
pF1KF0 RTKYVHQELLNHKNSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RTKYVHQELLNHKNSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLL
160 170 180 190 200 210
290 300 310 320 330 340
pF1KF0 SWSKDTYSPDEHFWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SWSKDTYSPDEHFWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGIC
220 230 240 250 260 270
350 360 370 380 390 400
pF1KF0 IYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
280 290 300 310 320
>>XP_016866221 (OMIM: 110800,116700,600429) PREDICTED: N (318 aa)
initn: 2077 init1: 2077 opt: 2077 Z-score: 2613.7 bits: 492.2 E(85289): 7.6e-139
Smith-Waterman score: 2077; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309)
10 20 30 40 50 60
pF1KF0 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KF0 TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KF0 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KF0 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KF0 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KF0 WVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
:::::::::
XP_016 WVTLNRIPGQKTEGTLAI
310
>>XP_011512770 (OMIM: 110800,116700,600429) PREDICTED: N (318 aa)
initn: 2077 init1: 2077 opt: 2077 Z-score: 2613.7 bits: 492.2 E(85289): 7.6e-139
Smith-Waterman score: 2077; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309)
10 20 30 40 50 60
pF1KF0 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KF0 TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KF0 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KF0 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KF0 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KF0 WVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
:::::::::
XP_011 WVTLNRIPGQKTEGTLAI
310
>>NP_663630 (OMIM: 110800,116700,600429) N-acetyllactosa (402 aa)
initn: 1969 init1: 1969 opt: 2047 Z-score: 2574.5 bits: 485.3 E(85289): 1.2e-136
Smith-Waterman score: 2047; 73.1% identity (87.6% similar) in 402 aa overlap (2-402:1-402)
10 20 30 40 50
pF1KF0 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAE-ACHQIFEGKVFY
:. :..:.:. .:.:..::: :...: : . . :. . . ::.. .: .
NP_663 MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKSYEKLNSSSERYFRKTACNHALEKMPVF
10 20 30 40 50
60 70 80 90 100 110
pF1KF0 PTENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYM
:: : . : . : .:....::.: ::::::.:::::...::::: :::::::::::
NP_663 LWENILPSPLRSVPCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KF0 PQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVA
::::::::.:.:: .: .:.:::::: :::.::: :::::.::::::::::::.::::
NP_663 PQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KF0 SEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNH
::::::::::::::::::::::::::.:::::::::::::::::::. :::::::: ..
NP_663 SEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KF0 KNSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEH
. .: .:. ::: :::...::::::::::::::..:::.:: :.:::.:::::::::::
NP_663 GGFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEH
240 250 260 270 280 290
300 310 320 330 340 350
pF1KF0 FWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVN
:::::::. :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_663 FWVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVN
300 310 320 330 340 350
360 370 380 390 400
pF1KF0 SPSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
:::::::::::::::::::::::::::::::::::::::::::
NP_663 SPSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
360 370 380 390 400
>>NP_001482 (OMIM: 110800,116700,600429) N-acetyllactosa (400 aa)
initn: 1959 init1: 1959 opt: 2014 Z-score: 2533.0 bits: 477.6 E(85289): 2.4e-134
Smith-Waterman score: 2014; 73.9% identity (87.3% similar) in 394 aa overlap (9-402:8-400)
10 20 30 40 50 60
pF1KF0 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYP
:: :. :..::. .. . : : .:. :...: ....::. .
NP_001 MPLSMRYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQVCTSFINGKTRFL
10 20 30 40 50
70 80 90 100 110 120
pF1KF0 TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP
.: : ....: ::...:::.: ::.::: ::::: ..::. : :: :::::::::
NP_001 WKNKL-MIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KF0 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS
::.::::.:.::: :: ::.:::::::::::::: : :::::::::::::::..:: :
NP_001 QNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KF0 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK
:: :::::::::::::::::.::::::::::::::::::::: ::.::::::::: :...
NP_001 EVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KF0 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF
::::.:: :: ::::...::::.:::::.:.::::::.: :.:::.:::::.::::::
NP_001 LSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHF
240 250 260 270 280 290
310 320 330 340 350 360
pF1KF0 WVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
300 310 320 330 340 350
370 380 390 400
pF1KF0 PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
::::::::::::::::::::::::::::::::::::::::::
NP_001 PSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
360 370 380 390 400
>>XP_011512768 (OMIM: 110800,116700,600429) PREDICTED: N (339 aa)
initn: 1294 init1: 1294 opt: 1387 Z-score: 1745.5 bits: 331.6 E(85289): 1.7e-90
Smith-Waterman score: 1387; 63.5% identity (83.0% similar) in 323 aa overlap (2-323:1-321)
10 20 30 40 50
pF1KF0 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAE-ACHQIFEGKVFY
:. :..:.:. .:.:..::: :...: : . . :. . . ::.. .: .
XP_011 MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKSYEKLNSSSERYFRKTACNHALEKMPVF
10 20 30 40 50
60 70 80 90 100 110
pF1KF0 PTENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYM
:: : . : . : .:....::.: ::::::.:::::...::::: :::::::::::
XP_011 LWENILPSPLRSVPCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KF0 PQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVA
::::::::.:.:: .: .:.:::::: :::.::: :::::.::::::::::::.::::
XP_011 PQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KF0 SEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNH
::::::::::::::::::::::::::.:::::::::::::::::::. :::::::: ..
XP_011 SEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KF0 KNSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEH
. .: .:. ::: :::...::::::::::::::..:::.:: :.:::.:::::::::::
XP_011 GGFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEH
240 250 260 270 280 290
300 310 320 330 340 350
pF1KF0 FWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVN
:::::::. :. :. :.::..
XP_011 FWVTLNRVSDSPS--PSHSFTGQVLLQILLKCVLRTKQGSFL
300 310 320 330
>>XP_005249054 (OMIM: 110800,116700,600429) PREDICTED: N (363 aa)
initn: 1277 init1: 1277 opt: 1332 Z-score: 1675.9 bits: 318.8 E(85289): 1.3e-86
Smith-Waterman score: 1332; 65.7% identity (83.3% similar) in 300 aa overlap (9-308:8-306)
10 20 30 40 50 60
pF1KF0 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYP
:: :. :..::. .. . : : .:. :...: ....::. .
XP_005 MPLSMRYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQVCTSFINGKTRFL
10 20 30 40 50
70 80 90 100 110 120
pF1KF0 TENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMP
.: : ....: ::...:::.: ::.::: ::::: ..::. : :: :::::::::
XP_005 WKNKLMIH-EKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KF0 QNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS
::.::::.:.::: :: ::.:::::::::::::: : :::::::::::::::..:: :
XP_005 QNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KF0 EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHK
:: :::::::::::::::::.::::::::::::::::::::: ::.::::::::: :...
XP_005 EVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KF0 NSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHF
::::.:: :: ::::...::::.:::::.:.::::::.: :.:::.:::::.::::::
XP_005 LSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHF
240 250 260 270 280 290
310 320 330 340 350 360
pF1KF0 WVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNS
::::::::
XP_005 WVTLNRIPVFGRYKGWDVLDMDLWQQLDCQIVSLGTSQLLFPRMRHSESEKSCCAERQIV
300 310 320 330 340 350
>>NP_004742 (OMIM: 606836) beta-1,3-galactosyl-O-glycosy (438 aa)
initn: 948 init1: 589 opt: 984 Z-score: 1237.1 bits: 237.9 E(85289): 3.6e-62
Smith-Waterman score: 984; 43.7% identity (73.5% similar) in 332 aa overlap (74-393:110-437)
50 60 70 80 90 100
pF1KF0 LLAEACHQIFEGKVFYPTENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTI
: .. .. ... ::.::. ::.::...:
NP_004 AVLQAILNNLEVKKKREPFTDTHYLSLTRDCEHFKAERKFIQFPLSKEEVEFPIAYSMVI
80 90 100 110 120 130
110 120 130 140 150 160
pF1KF0 HKDFGTFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGG
:. . .::::.::.: :::.::::.:.:. ..:: ::: ..:::::.:.::: :::..
NP_004 HEKIENFERLLRAVYAPQNIYCVHVDEKSPETFKEAVKAIISCFPNVFIASKLVRVVYAS
140 150 160 170 180 190
170 180 190 200 210 220
pF1KF0 ISRLQADLNCLEDLVASEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPD
::.::::::.:::. : ::::: .:::: :::.:.: :.:: :: ..:.: . .::
NP_004 WSRVQADLNCMEDLLQSSVPWKYFLNTCGTDFPIKSNAEMVQALKMLNGRNSMESEVPPK
200 210 220 230 240 250
230 240 250 260 270 280
pF1KF0 HAVGRTKYVHQELLNHKNSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLA
: : :: : :.. ... . :.: : :::...... :.::.. .:::.. ::.. .
NP_004 HKETRWKY-HFEVV--RDTLHL-TNKKKDPPPYNLTMFTGNAYIVASRDFVQHVLKNPKS
260 270 280 290 300 310
290 300 310 320 330
pF1KF0 LDLLSWSKDTYSPDEHFWVTLNRIPGVPGSMPN------ASWTGNLRAIKWSDME---DR
.:. : :::::::::.:.::.: .:::.:: .. :. : .::. : :.
NP_004 QQLIEWVKDTYSPDEHLWATLQRARWMPGSVPNHPKYDISDMTSIARLVKWQGHEGDIDK
320 330 340 350 360 370
340 350 360 370 380 390
pF1KF0 ---HGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQ
.. : : . ..::.:: :::.:.... :.::::. .. ...::: : ...
NP_004 GAPYAPCSGIHQRAICVYGAGDLNWMLQNHHLLANKFDPKVDDNALQCLEEYLRYKAIYG
380 390 400 410 420 430
400
pF1KF0 SETAIQPSWYF
.:
NP_004 TEL
402 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 19:27:23 2016 done: Thu Nov 3 19:27:25 2016
Total Scan time: 8.340 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]