(Circular) (Six-base) MAPSORT of: pF1KSDA0135.seq Check: 1875 from: 1 to: 7129 pF1KSDA0135 7129 bp With 182 enzymes: SgfI * June 20, 2008 10:32 .. AatII G_ACGT'C Cuts at: 1358 1358 Size: 7129 AccI GT'mk_AC Cuts at: 2847 4165 2847 Size: 1318 5811 Acc65I G'GTAC_C Cuts at: 1042 4143 1042 Size: 3101 4028 AclI AA'CG_TT Cuts at: 6969 6969 Size: 7129 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 341 1793 4952 5384 6133 6401 341 Size: 1452 3159 432 749 268 1069 Fragments arranged by size: 3159 1452 1069 749 432 268 AfeI AGC'GCT Cuts at: 314 314 Size: 7129 AflIII A'CryG_T Cuts at: 914 2661 2696 4479 5585 6562 914 Size: 1747 35 1783 1106 977 1481 Fragments arranged by size: 1783 1747 1481 1106 977 35 AgeI A'CCGG_T Cuts at: 1102 5517 1102 Size: 4415 2714 AhdI GACnn_n'nnGTC Cuts at: 2388 2388 Size: 7129 AleI CACnn'nnGTG Cuts at: 724 2749 724 Size: 2025 5104 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 410 1676 410 Size: 1266 5863 AlwNI CAG_nnn'CTG Cuts at: 296 609 652 766 1638 3047 3853 4432 6001 Size: 313 43 114 872 1409 806 579 1569 Cuts at: 6001 296 Size: 1424 Fragments arranged by size: 1569 1424 1409 872 806 579 313 114 43 ApaI G_GGCC'C Cuts at: 211 2884 4048 211 Size: 2673 1164 3292 Fragments arranged by size: 3292 2673 1164 ApaLI G'TGCA_C Cuts at: 1621 3653 5899 1621 Size: 2032 2246 2851 Fragments arranged by size: 2851 2246 2032 ApoI r'AATT_y Cuts at: 2334 4131 6482 6738 2334 Size: 1797 2351 256 2725 Fragments arranged by size: 2725 2351 1797 256 AseI AT'TA_AT Cuts at: 20 1442 20 Size: 1422 5707 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 7129 AvaI C'yCGr_G Cuts at: 1475 4090 4147 1475 Size: 2615 57 4457 Fragments arranged by size: 4457 2615 57 BamHI G'GATC_C Cuts at: 1431 3252 4095 4152 1431 Size: 1821 843 57 4408 Fragments arranged by size: 4408 1821 843 57 BanI G'GyrC_C Cuts at: 868 1042 2530 2800 4143 4557 4805 4840 868 Size: 174 1488 270 1343 414 248 35 3157 Fragments arranged by size: 3157 1488 1343 414 270 248 174 35 BanII G_rGCy'C Cuts at: 211 236 337 587 827 1253 1699 2148 2455 Size: 25 101 250 240 426 446 449 307 Cuts at: 2455 2876 2884 3008 3062 3136 3434 4048 4141 Size: 421 8 124 54 74 298 614 93 Cuts at: 4141 5171 211 Size: 1030 2169 Fragments arranged by size: 2169 1030 614 449 446 426 421 307 298 250 240 124 101 93 74 54 25 8 BbeI G_GCGC'C Cuts at: 4561 4809 4561 Size: 248 6881 BbsI GAAGACnn'nnnn_ Cuts at: 329 329 Size: 7129 BbvCI CC'TCA_GC Cuts at: 252 670 1418 1574 1790 2262 3557 252 Size: 418 748 156 216 472 1295 3824 Fragments arranged by size: 3824 1295 748 472 418 216 156 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 2015 2049 3634 3668 2015 Size: 34 1585 34 5476 Fragments arranged by size: 5476 1585 34 34 BciVI GTATCCnnnnn_n' Cuts at: 3490 5025 5788 7129 3490 Size: 1535 763 1341 3490 Fragments arranged by size: 3490 1535 1341 763 BclI T'GATC_A Cuts at: 4647 4647 Size: 7129 BglI GCCn_nnn'nGGC Cuts at: 2978 3140 2978 Size: 162 6967 BglII A'GATC_T Cuts at: 4642 6681 4642 Size: 2039 5090 BlpI GC'TnA_GC Cuts at: 230 3002 4239 230 Size: 2772 1237 3120 Fragments arranged by size: 3120 2772 1237 Bme1580I G_kGCm'C Cuts at: 211 1475 1625 2704 2884 3657 4048 4752 4845 Size: 1264 150 1079 180 773 391 704 93 Cuts at: 4845 5903 211 Size: 1058 1437 Fragments arranged by size: 1437 1264 1079 1058 773 704 391 180 150 93 BmgBI CAC'GTC Cuts at: 878 930 878 Size: 52 7077 BmrI ACTGGGnnnn_n' Cuts at: 2121 4339 4420 4755 6901 2121 Size: 2218 81 335 2146 2349 Fragments arranged by size: 2349 2218 2146 335 81 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 855 1570 2451 5494 855 Size: 715 881 3043 2490 Fragments arranged by size: 3043 2490 881 715 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 841 1565 1568 1763 2461 2860 3100 3718 3784 Size: 724 3 195 698 399 240 618 66 Cuts at: 3784 4009 841 Size: 225 3961 Fragments arranged by size: 3961 724 698 618 399 240 225 195 66 3 Bpu10I CC'TnA_GC Cuts at: 252 268 404 670 1418 1574 1790 2262 3557 Size: 16 136 266 748 156 216 472 1295 Cuts at: 3557 4028 252 Size: 471 3353 Fragments arranged by size: 3353 1295 748 472 471 266 216 156 136 16 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 991 2338 2623 4303 5182 5676 5974 991 Size: 1347 285 1680 879 494 298 2146 Fragments arranged by size: 2146 1680 1347 879 494 298 285 BsaI GGTCTCn'nnnn_ Cuts at: 843 2225 3713 3763 6833 843 Size: 1382 1488 50 3070 1139 Fragments arranged by size: 3070 1488 1382 1139 50 BsaAI yAC'GTr Cuts at: 915 2699 4119 4480 915 Size: 1784 1420 361 3564 Fragments arranged by size: 3564 1784 1420 361 BsaBI GATnn'nnATC Cuts at: 6 4641 6680 6 Size: 4635 2039 455 Fragments arranged by size: 4635 2039 455 BsaHI Gr'CG_yC Cuts at: 1355 4558 4806 5510 7006 1355 Size: 3203 248 704 1496 1478 Fragments arranged by size: 3203 1496 1478 704 248 BsaWI w'CCGG_w Cuts at: 1102 1487 3010 3657 4316 4837 5517 5791 5938 Size: 385 1523 647 659 521 680 274 147 Cuts at: 5938 6349 1102 Size: 411 1882 Fragments arranged by size: 1882 1523 680 659 647 521 411 385 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 2107 2137 3691 3721 3996 4026 2107 Size: 30 1554 30 275 30 5210 Fragments arranged by size: 5210 1554 275 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 691 1105 2250 2728 2911 3070 3757 3781 691 Size: 414 1145 478 183 159 687 24 4039 Fragments arranged by size: 4039 1145 687 478 414 183 159 24 BseYI C'CCAG_C Cuts at: 210 235 934 1081 1413 1785 1838 1867 1888 Size: 25 699 147 332 372 53 29 21 Cuts at: 1888 2008 2067 3016 3138 4552 5310 5889 6385 Size: 120 59 949 122 1414 758 579 496 Cuts at: 6385 210 Size: 954 Fragments arranged by size: 1414 954 949 758 699 579 496 372 332 147 122 120 59 53 29 25 21 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 200 370 988 1137 2232 200 Size: 170 618 149 1095 5097 Fragments arranged by size: 5097 1095 618 170 149 BsiEI CG_ry'CG Cuts at: 104 2085 3411 3596 4669 4715 5925 104 Size: 1981 1326 185 1073 46 1210 1308 Fragments arranged by size: 1981 1326 1308 1210 1073 185 46 BsiHKAI G_wGCw'C Cuts at: 337 410 683 1253 1625 2876 3008 3035 3308 Size: 73 273 570 372 1251 132 27 273 Cuts at: 3308 3657 4141 4919 5109 5903 337 Size: 349 484 778 190 794 1563 Fragments arranged by size: 1563 1251 794 778 570 484 372 349 273 273 190 132 73 27 BsmBI CGTCTCn'nnnn_ Cuts at: 2822 3852 2822 Size: 1030 6099 Bsp1286I G_dGCh'C Cuts at: 211 236 337 410 587 683 827 1253 1475 Size: 25 101 73 177 96 144 426 222 Cuts at: 1475 1625 1699 2148 2455 2704 2876 2884 3008 Size: 150 74 449 307 249 172 8 124 Cuts at: 3008 3035 3062 3136 3308 3434 3657 4048 4141 Size: 27 27 74 172 126 223 391 93 Cuts at: 4141 4752 4845 4919 5109 5171 5903 211 Size: 611 93 74 190 62 732 1437 Fragments arranged by size: 1437 732 611 449 426 391 307 249 223 222 190 177 172 172 150 144 126 124 101 96 93 93 74 74 74 73 62 27 27 25 8 BspEI T'CCGG_A Cuts at: 1487 6349 1487 Size: 4862 2267 BspHI T'CATG_A Cuts at: 3818 6305 3818 Size: 2487 4642 BspMI ACCTGCnnnn'nnnn_ Cuts at: 230 1715 2110 3509 4177 4391 4693 5074 230 Size: 1485 395 1399 668 214 302 381 2285 Fragments arranged by size: 2285 1485 1399 668 395 381 302 214 BsrBI CCG'CTC Cuts at: 50 1124 1848 2200 5419 5473 6959 7124 50 Size: 1074 724 352 3219 54 1486 165 55 Fragments arranged by size: 3219 1486 1074 724 352 165 55 54 BsrDI GCAATG_nn' Cuts at: 1368 5039 1368 Size: 3671 3458 BsrFI r'CCGG_y Cuts at: 1102 2527 5125 5306 5517 1102 Size: 1425 2598 181 211 2714 Fragments arranged by size: 2714 2598 1425 211 181 BsrGI T'GTAC_A Cuts at: 373 3725 373 Size: 3352 3777 BssSI C'ACGA_G Cuts at: 5398 5758 5398 Size: 360 6769 BstAPI GCAn_nnn'nTGC Cuts at: 4504 4504 Size: 7129 BstBI TT'CG_AA Cuts at: 110 110 Size: 7129 BstEII G'GTnAC_C Cuts at: 2736 2736 Size: 7129 BstXI CCAn_nnnn'nTGG Cuts at: 865 1350 3024 3072 865 Size: 485 1674 48 4922 Fragments arranged by size: 4922 1674 485 48 BstYI r'GATC_y Cuts at: 1 554 1431 1484 1707 2789 3252 4095 4152 Size: 553 877 53 223 1082 463 843 57 Cuts at: 4152 4619 4642 4977 5223 6237 6323 6335 6681 Size: 467 23 335 246 1014 86 12 346 Cuts at: 6681 1 Size: 449 Fragments arranged by size: 1082 1014 877 843 553 467 463 449 346 335 246 223 86 57 53 23 12 BstZ17I GTA'TAC Cuts at: 2848 2848 Size: 7129 Bsu36I CC'TnA_GG Cuts at: 471 2690 471 Size: 2219 4910 BtgI C'CryG_G Cuts at: 125 427 827 1197 1396 1898 2062 2282 3773 Size: 302 400 370 199 502 164 220 1491 Cuts at: 3773 3892 125 Size: 119 3362 Fragments arranged by size: 3362 1491 502 400 370 302 220 199 164 119 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 878 5077 5258 5421 878 Size: 4199 181 163 2586 Fragments arranged by size: 4199 2586 181 163 BtsI GCAGTG_nn' Cuts at: 224 387 441 1658 1809 1950 2315 2453 3150 Size: 163 54 1217 151 141 365 138 697 Cuts at: 3150 3497 4370 224 Size: 347 873 2983 Fragments arranged by size: 2983 1217 873 697 365 347 163 151 141 138 54 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 1350 1385 1350 Size: 35 7094 DraI TTT'AAA Cuts at: 4126 4126 Size: 7129 DraIII CAC_nnn'GTG Cuts at: 1470 1470 Size: 7129 DrdI GACnn_nn'nnGTC Cuts at: 4833 5693 4833 Size: 860 6269 EaeI y'GGCC_r Cuts at: 615 696 984 1340 1461 1901 2279 2547 3593 Size: 81 288 356 121 440 378 268 1046 Cuts at: 3593 4071 4712 4886 5277 5304 6651 615 Size: 478 641 174 391 27 1347 1093 Fragments arranged by size: 1347 1093 1046 641 478 440 391 378 356 288 268 174 121 81 27 EagI C'GGCC_G Cuts at: 3593 4712 3593 Size: 1119 6010 EarI CTCTTCn'nnn_ Cuts at: 149 772 1023 2084 2442 3400 3929 5150 5360 Size: 623 251 1061 358 958 529 1221 210 Cuts at: 5360 149 Size: 1918 Fragments arranged by size: 1918 1221 1061 958 623 529 358 251 210 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 5335 5647 5793 6939 5335 Size: 312 146 1146 5525 Fragments arranged by size: 5525 1146 312 146 EcoICRI GAG'CTC Cuts at: 335 1251 2874 3006 4139 335 Size: 916 1623 132 1133 3325 Fragments arranged by size: 3325 1623 1133 916 132 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 341 841 1565 1568 1763 1793 2461 2860 3100 Size: 500 724 3 195 30 668 399 240 Cuts at: 3100 3718 3784 4009 4952 5384 6133 6401 341 Size: 618 66 225 943 432 749 268 1069 Fragments arranged by size: 1069 943 749 724 668 618 500 432 399 268 240 225 195 66 30 3 EcoNI CCTnn'n_nnAGG Cuts at: 673 1583 673 Size: 910 6219 EcoO109I rG'GnC_Cy Cuts at: 207 606 666 1410 2298 2880 2881 2951 3149 Size: 399 60 744 888 582 1 70 198 Cuts at: 3149 4044 4045 4266 207 Size: 895 1 221 3070 Fragments arranged by size: 3070 895 888 744 582 399 221 198 70 60 1 1 EcoRI G'AATT_C Cuts at: 2334 4131 2334 Size: 1797 5332 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 543 2379 5146 543 Size: 1836 2767 2526 Fragments arranged by size: 2767 2526 1836 FspI TGC'GCA Cuts at: 4908 4908 Size: 7129 HaeII r_GCGC'y Cuts at: 316 798 1639 4561 4809 5833 6812 316 Size: 482 841 2922 248 1024 979 633 Fragments arranged by size: 2922 1024 979 841 633 482 248 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1469 1501 2034 2066 2107 2139 2374 2406 3237 Size: 32 533 32 41 32 235 32 831 Cuts at: 3237 3269 3574 3606 3691 3693 3723 3725 4969 Size: 32 305 32 85 2 30 2 1244 Cuts at: 4969 4999 5001 5031 1469 Size: 30 2 30 3567 Fragments arranged by size: 3567 1244 831 533 305 235 85 41 32 32 32 32 32 32 30 30 30 2 2 2 HincII GTy'rAC Cuts at: 2541 4166 2541 Size: 1625 5504 HindIII A'AGCT_T Cuts at: 575 575 Size: 7129 KasI G'GCGC_C Cuts at: 4557 4805 4557 Size: 248 6881 KpnI G_GTAC'C Cuts at: 1046 4147 1046 Size: 3101 4028 MluI A'CGCG_T Cuts at: 6562 6562 Size: 7129 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1005 2200 2614 2657 3223 3477 5800 5984 1005 Size: 1195 414 43 566 254 2323 184 2150 Fragments arranged by size: 2323 2150 1195 566 414 254 184 43 MscI TGG'CCA Cuts at: 617 986 1342 1463 1903 2281 2549 4073 4888 Size: 369 356 121 440 378 268 1524 815 Cuts at: 4888 617 Size: 2858 Fragments arranged by size: 2858 1524 815 440 378 369 356 268 121 MslI CAynn'nnrTG Cuts at: 724 2749 5116 5243 724 Size: 2025 2367 127 2610 Fragments arranged by size: 2610 2367 2025 127 MspA1I CmG'CkG Cuts at: 214 429 1346 1417 1789 1871 1926 2121 2784 Size: 215 917 71 372 82 55 195 663 Cuts at: 2784 2998 3138 3979 4238 4552 4912 5927 6172 Size: 214 140 841 259 314 360 1015 245 Cuts at: 6172 214 Size: 1171 Fragments arranged by size: 1171 1015 917 841 663 372 360 314 259 245 215 214 195 140 82 71 55 NaeI GCC'GGC Cuts at: 5308 5308 Size: 7129 NarI GG'CG_CC Cuts at: 4558 4806 4558 Size: 248 6881 NcoI C'CATG_G Cuts at: 125 125 Size: 7129 NgoMIV G'CCGG_C Cuts at: 5306 5306 Size: 7129 NruI TCG'CGA Cuts at: 5490 5490 Size: 7129 NspI r_CATG'y Cuts at: 1818 4180 4680 5589 1818 Size: 2362 500 909 3358 Fragments arranged by size: 3358 2362 909 500 PasI CC'CwG_GG Cuts at: 2293 2293 Size: 7129 PciI A'CATG_T Cuts at: 5585 5585 Size: 7129 PflMI CCAn_nnn'nTGG Cuts at: 3047 3964 3047 Size: 917 6212 PfoI T'CCnGG_A Cuts at: 818 2344 2477 2498 2564 2792 2809 818 Size: 1526 133 21 66 228 17 5138 Fragments arranged by size: 5138 1526 228 133 66 21 17 PmeI GTTT'AAAC Cuts at: 4126 4126 Size: 7129 PmlI CAC'GTG Cuts at: 2699 2699 Size: 7129 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 6268 6300 6268 Size: 32 7097 PpuMI rG'GwC_Cy Cuts at: 606 1410 2951 606 Size: 804 1541 4784 Fragments arranged by size: 4784 1541 804 PshAI GACnn'nnGTC Cuts at: 847 847 Size: 7129 PspOMI G'GGCC_C Cuts at: 207 2880 4044 207 Size: 2673 1164 3292 Fragments arranged by size: 3292 2673 1164 PstI C_TGCA'G Cuts at: 2099 2783 3845 4174 4859 2099 Size: 684 1062 329 685 4369 Fragments arranged by size: 4369 1062 685 684 329 PvuI CG_AT'CG Cuts at: 104 104 Size: 7129 PvuII CAG'CTG Cuts at: 214 1346 1417 1789 1926 2121 4552 4912 214 Size: 1132 71 372 137 195 2431 360 2431 Fragments arranged by size: 2431 2431 1132 372 360 195 137 71 RsrII CG'GwC_CG Cuts at: 5322 5322 Size: 7129 SacI G_AGCT'C Cuts at: 337 1253 2876 3008 4141 337 Size: 916 1623 132 1133 3325 Fragments arranged by size: 3325 1623 1133 916 132 SacII CC_GC'GG Cuts at: 430 430 Size: 7129 SalI G'TCGA_C Cuts at: 4164 4164 Size: 7129 SapI GCTCTTCn'nnn_ Cuts at: 1023 2084 5150 5360 1023 Size: 1061 3066 210 2792 Fragments arranged by size: 3066 2792 1061 210 SbfI CC_TGCA'GG Cuts at: 4174 4174 Size: 7129 ScaI AGT'ACT Cuts at: 3109 3649 6646 3109 Size: 540 2997 3592 Fragments arranged by size: 3592 2997 540 SexAI A'CCwGG_T Cuts at: 3800 3800 Size: 7129 SfcI C'TryA_G Cuts at: 33 1290 2095 2779 3681 3841 4170 4855 5850 Size: 1257 805 684 902 160 329 685 995 Cuts at: 5850 6041 33 Size: 191 1121 Fragments arranged by size: 1257 1121 995 902 805 685 684 329 191 160 SfoI GGC'GCC Cuts at: 4559 4807 4559 Size: 248 6881 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 7129 SgrAI Cr'CCGG_yG Cuts at: 1102 1102 Size: 7129 SmaI CCC'GGG Cuts at: 4092 4149 4092 Size: 57 7072 SmlI C'TyrA_G Cuts at: 1006 2353 2602 4282 5197 5691 5953 1006 Size: 1347 249 1680 915 494 262 2182 Fragments arranged by size: 2182 1680 1347 915 494 262 249 SnaBI TAC'GTA Cuts at: 4119 4119 Size: 7129 SpeI A'CTAG_T Cuts at: 67 67 Size: 7129 SphI G_CATG'C Cuts at: 4180 4680 4180 Size: 500 6629 SspI AAT'ATT Cuts at: 369 369 Size: 7129 StuI AGG'CCT Cuts at: 2030 2030 Size: 7129 StyI C'CwwG_G Cuts at: 125 1388 1435 1643 1664 1916 2276 2441 2544 Size: 1263 47 208 21 252 360 165 103 Cuts at: 2544 2550 2719 3065 3345 3869 4074 4261 4615 Size: 6 169 346 280 524 205 187 354 Cuts at: 4615 125 Size: 2639 Fragments arranged by size: 2639 1263 524 360 354 346 280 252 208 205 187 169 165 103 47 21 6 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 1134 1361 2099 3001 4710 4843 5302 5513 1134 Size: 227 738 902 1709 133 459 211 2750 Fragments arranged by size: 2750 1709 902 738 459 227 211 133 TatI w'GTAC_w Cuts at: 373 3107 3119 3647 3725 6644 373 Size: 2734 12 528 78 2919 858 Fragments arranged by size: 2919 2734 858 528 78 12 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 2653 2685 3925 3957 3996 4028 6646 6678 2653 Size: 32 1240 32 39 32 2618 32 3104 Fragments arranged by size: 3104 2618 1240 39 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 1597 4924 1597 Size: 3327 3802 XbaI T'CTAG_A Cuts at: 2052 4158 2052 Size: 2106 5023 XcmI CCAnnnn_n'nnnnTGG Cuts at: 531 610 767 1923 3135 4622 531 Size: 79 157 1156 1212 1487 3038 Fragments arranged by size: 3038 1487 1212 1156 157 79 XmaI C'CCGG_G Cuts at: 4090 4147 4090 Size: 57 7072 XmnI GAAnn'nnTTC Cuts at: 2171 3751 2171 Size: 1580 5549 ZraI GAC'GTC Cuts at: 1356 1356 Size: 7129 Enzymes that do cut: AatII AccI Acc65I AclI AcuI AfeI AflIII AgeI AhdI AleI AlfI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssSI BstAPI BstBI BstEII BstXI BstYI BstZ17I Bsu36I BtgI BtgZI BtsI CspCI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII HindIII KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NruI NspI PasI PciI PflMI PfoI PmeI PmlI PpiI PpuMI PshAI PspOMI PstI PvuI PvuII RsrII SacI SacII SalI SapI SbfI ScaI SexAI SfcI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XmaI XmnI ZraI Enzymes that do not cut: AarI AflII AloI AscI AvrII BaeI BfrBI BmtI BsiWI BsmI BssHII ClaI EcoRV FseI FspAI HpaI MfeI NdeI NheI NotI NsiI PacI PsiI PspXI PsrI SanDI SfiI SrfI SwaI XhoI