Result of FASTA (omim) for
pF1KSDA0181
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0181, 2063 aa
1>>>pF1KSDA0181 2063 - 2063 aa - 2063 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 18.9767+/-0.000545; mu= -40.2135+/- 0.034
mean_var=842.6535+/-181.086, 0's: 0 Z-trim(123.7): 319 B-trim: 1595 in 1/60
Lambda= 0.044182
statistics sampled from 43686 (44106) to 43686 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.765), E-opt: 0.2 (0.517), width: 16
Scan time: 24.760
The best scores are: opt bits E(85289)
NP_001305169 (OMIM: 605299) nuclear receptor coact (2063) 13985 908.6 0
NP_054790 (OMIM: 605299) nuclear receptor coactiva (2063) 13985 908.6 0
XP_011527023 (OMIM: 605299) PREDICTED: nuclear rec (2068) 13965 907.3 0
XP_006723818 (OMIM: 605299) PREDICTED: nuclear rec (1975) 13395 870.9 0
XP_011527028 (OMIM: 605299) PREDICTED: nuclear rec (2057) 11780 768.0 0
XP_011527029 (OMIM: 605299) PREDICTED: nuclear rec (2056) 11754 766.4 0
XP_016883233 (OMIM: 605299) PREDICTED: nuclear rec (2051) 10674 697.5 3.8e-199
XP_016883234 (OMIM: 605299) PREDICTED: nuclear rec (2039) 10612 693.6 5.9e-198
XP_016883228 (OMIM: 605299) PREDICTED: nuclear rec (2087) 10608 693.3 7.2e-198
XP_016883229 (OMIM: 605299) PREDICTED: nuclear rec (2087) 10608 693.3 7.2e-198
XP_016883231 (OMIM: 605299) PREDICTED: nuclear rec (2082) 10606 693.2 7.8e-198
XP_016883230 (OMIM: 605299) PREDICTED: nuclear rec (2086) 10591 692.2 1.5e-197
XP_016883236 (OMIM: 605299) PREDICTED: nuclear rec (1907) 10583 691.7 2e-197
XP_016883232 (OMIM: 605299) PREDICTED: nuclear rec (2058) 10223 668.8 1.7e-190
XP_016883235 (OMIM: 605299) PREDICTED: nuclear rec (1999) 10018 655.7 1.5e-186
XP_016883238 (OMIM: 605299) PREDICTED: nuclear rec (1650) 7463 492.8 1.3e-137
XP_016883237 (OMIM: 605299) PREDICTED: nuclear rec (1651) 7463 492.8 1.3e-137
NP_001229468 (OMIM: 605299) nuclear receptor coact (1070) 6800 450.4 4.8e-125
XP_016883240 (OMIM: 605299) PREDICTED: nuclear rec (1070) 6800 450.4 4.8e-125
XP_016883239 (OMIM: 605299) PREDICTED: nuclear rec (1094) 3423 235.2 3.1e-60
XP_011536691 (OMIM: 601234) PREDICTED: nascent pol (2078) 665 59.5 4.4e-07
XP_006719477 (OMIM: 601234) PREDICTED: nascent pol (2082) 665 59.5 4.4e-07
XP_006719476 (OMIM: 601234) PREDICTED: nascent pol (2082) 665 59.5 4.4e-07
XP_006719475 (OMIM: 601234) PREDICTED: nascent pol (2082) 665 59.5 4.4e-07
XP_016857515 (OMIM: 602597) PREDICTED: B-cell CLL/ (1352) 523 50.4 0.00016
XP_005277475 (OMIM: 602597) PREDICTED: B-cell CLL/ (1352) 523 50.4 0.00016
XP_005273028 (OMIM: 602597) PREDICTED: B-cell CLL/ (1426) 523 50.4 0.00017
NP_004317 (OMIM: 602597) B-cell CLL/lymphoma 9 pro (1426) 523 50.4 0.00017
NP_624361 (OMIM: 603024,614607) AT-rich interactiv (2068) 470 47.1 0.0024
NP_006006 (OMIM: 603024,614607) AT-rich interactiv (2285) 470 47.1 0.0026
XP_016866596 (OMIM: 135900,614556,614562) PREDICTE (2256) 454 46.1 0.0053
XP_005267126 (OMIM: 135900,614556,614562) PREDICTE (2289) 452 46.0 0.0058
XP_011528517 (OMIM: 607372) PREDICTED: mediator of ( 741) 427 44.1 0.0068
XP_016884306 (OMIM: 607372) PREDICTED: mediator of ( 749) 427 44.1 0.0069
XP_011528516 (OMIM: 607372) PREDICTED: mediator of ( 762) 427 44.1 0.007
NP_001003891 (OMIM: 607372) mediator of RNA polyme ( 788) 427 44.1 0.0072
XP_011537078 (OMIM: 147920,602113) PREDICTED: hist (5525) 463 46.9 0.0075
XP_006719679 (OMIM: 147920,602113) PREDICTED: hist (5536) 463 46.9 0.0075
XP_005269219 (OMIM: 147920,602113) PREDICTED: hist (5537) 463 46.9 0.0075
NP_003473 (OMIM: 147920,602113) histone-lysine N-m (5537) 463 46.9 0.0075
XP_006719677 (OMIM: 147920,602113) PREDICTED: hist (5540) 463 46.9 0.0075
XP_011537076 (OMIM: 147920,602113) PREDICTED: hist (5549) 463 46.9 0.0075
XP_011537075 (OMIM: 147920,602113) PREDICTED: hist (5552) 463 46.9 0.0075
XP_011537074 (OMIM: 147920,602113) PREDICTED: hist (5553) 463 46.9 0.0075
XP_011537073 (OMIM: 147920,602113) PREDICTED: hist (5555) 463 46.9 0.0075
XP_011537072 (OMIM: 147920,602113) PREDICTED: hist (5556) 463 46.9 0.0075
XP_016884307 (OMIM: 607372) PREDICTED: mediator of ( 707) 423 43.8 0.0078
XP_006724327 (OMIM: 607372) PREDICTED: mediator of ( 707) 423 43.8 0.0078
XP_016884308 (OMIM: 607372) PREDICTED: mediator of ( 707) 423 43.8 0.0078
XP_006724326 (OMIM: 607372) PREDICTED: mediator of ( 717) 423 43.9 0.0079
>>NP_001305169 (OMIM: 605299) nuclear receptor coactivat (2063 aa)
initn: 13985 init1: 13985 opt: 13985 Z-score: 4836.8 bits: 908.6 E(85289): 0
Smith-Waterman score: 13985; 100.0% identity (100.0% similar) in 2063 aa overlap (1-2063:1-2063)
10 20 30 40 50 60
pF1KSD MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQAR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD QQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD PGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD VPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD MMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD MQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQV
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD MGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD ASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHF
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD GVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGISLDNSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
NP_001 GVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD PKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD PQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMV
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD SLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KSD PSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNV
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KSD AAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KSD PPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGA
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KSD TKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVLVSPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVLVSPTP
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KSD LANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKEQVNIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKEQVNIE
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KSD LKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSGA
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KSD PNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSLV
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KSD HPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAALPTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAALPTHL
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KSD QSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPA
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KSD APLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATP
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KSD VQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSPLLTNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSPLLTNS
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KSD PGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQGLDTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQGLDTT
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KSD APGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVRSIVTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVRSIVTT
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KSD LVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKETSTTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKETSTTAL
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KSD QASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHRKRSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHRKRSSR
1990 2000 2010 2020 2030 2040
2050 2060
pF1KSD PASASSSTKDITSAVQSKRRKSK
:::::::::::::::::::::::
NP_001 PASASSSTKDITSAVQSKRRKSK
2050 2060
>>NP_054790 (OMIM: 605299) nuclear receptor coactivator (2063 aa)
initn: 13985 init1: 13985 opt: 13985 Z-score: 4836.8 bits: 908.6 E(85289): 0
Smith-Waterman score: 13985; 100.0% identity (100.0% similar) in 2063 aa overlap (1-2063:1-2063)
10 20 30 40 50 60
pF1KSD MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 TVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQAR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD QQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 QQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD PGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD VPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 VPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD MMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 MMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD MQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 MQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQV
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD MGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 MGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD ASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 ASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHF
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD GVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGISLDNSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
NP_054 GVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD PKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD PQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMV
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD SLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 SLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KSD PSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNV
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KSD AAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 AAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KSD PPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGA
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KSD TKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVLVSPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 TKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVLVSPTP
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KSD LANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKEQVNIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 LANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKEQVNIE
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KSD LKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 LKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSGA
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KSD PNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSLV
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KSD HPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAALPTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 HPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAALPTHL
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KSD QSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 QSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPA
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KSD APLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 APLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATP
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KSD VQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSPLLTNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 VQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSPLLTNS
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KSD PGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQGLDTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 PGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQGLDTT
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KSD APGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVRSIVTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 APGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVRSIVTT
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KSD LVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKETSTTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 LVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKETSTTAL
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KSD QASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHRKRSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 QASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHRKRSSR
1990 2000 2010 2020 2030 2040
2050 2060
pF1KSD PASASSSTKDITSAVQSKRRKSK
:::::::::::::::::::::::
NP_054 PASASSSTKDITSAVQSKRRKSK
2050 2060
>>XP_011527023 (OMIM: 605299) PREDICTED: nuclear recepto (2068 aa)
initn: 12869 init1: 12869 opt: 13965 Z-score: 4829.9 bits: 907.3 E(85289): 0
Smith-Waterman score: 13965; 99.7% identity (99.8% similar) in 2068 aa overlap (1-2063:1-2068)
10 20 30 40 50 60
pF1KSD MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
70 80 90 100 110 120
130 140 150 160 170
pF1KSD DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGI-----IR
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_011 DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIFFLGIIR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD LAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQ
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD QQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KSD QLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KSD TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG
430 440 450 460 470 480
480 490 500 510 520 530
pF1KSD RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPS
490 500 510 520 530 540
540 550 560 570 580 590
pF1KSD TTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQ
550 560 570 580 590 600
600 610 620 630 640 650
pF1KSD AGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQL
610 620 630 640 650 660
660 670 680 690 700 710
pF1KSD MPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQ
670 680 690 700 710 720
720 730 740 750 760 770
pF1KSD IMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNN
730 740 750 760 770 780
780 790 800 810 820 830
pF1KSD SPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQA
790 800 810 820 830 840
840 850 860 870 880 890
pF1KSD MQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDI
850 860 870 880 890 900
900 910 920 930 940 950
pF1KSD SAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGIS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 SAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGIN
910 920 930 940 950 960
960 970 980 990 1000 1010
pF1KSD LDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQP
970 980 990 1000 1010 1020
1020 1030 1040 1050 1060 1070
pF1KSD PPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGS
1030 1040 1050 1060 1070 1080
1080 1090 1100 1110 1120 1130
pF1KSD VPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEA
1090 1100 1110 1120 1130 1140
1140 1150 1160 1170 1180 1190
pF1KSD SGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGH
1150 1160 1170 1180 1190 1200
1200 1210 1220 1230 1240 1250
pF1KSD HFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQ
1210 1220 1230 1240 1250 1260
1260 1270 1280 1290 1300 1310
pF1KSD INIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 INIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQ
1270 1280 1290 1300 1310 1320
1320 1330 1340 1350 1360 1370
pF1KSD SNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVL
1330 1340 1350 1360 1370 1380
1380 1390 1400 1410 1420 1430
pF1KSD VSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKE
1390 1400 1410 1420 1430 1440
1440 1450 1460 1470 1480 1490
pF1KSD QVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLL
1450 1460 1470 1480 1490 1500
1500 1510 1520 1530 1540 1550
pF1KSD DNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNEL
1510 1520 1530 1540 1550 1560
1560 1570 1580 1590 1600 1610
pF1KSD CSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAA
1570 1580 1590 1600 1610 1620
1620 1630 1640 1650 1660 1670
pF1KSD LPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQP
1630 1640 1650 1660 1670 1680
1680 1690 1700 1710 1720 1730
pF1KSD STIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLS
1690 1700 1710 1720 1730 1740
1740 1750 1760 1770 1780 1790
pF1KSD SRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSP
1750 1760 1770 1780 1790 1800
1800 1810 1820 1830 1840 1850
pF1KSD LLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQ
1810 1820 1830 1840 1850 1860
1860 1870 1880 1890 1900 1910
pF1KSD GLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVR
1870 1880 1890 1900 1910 1920
1920 1930 1940 1950 1960 1970
pF1KSD SIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKET
1930 1940 1950 1960 1970 1980
1980 1990 2000 2010 2020 2030
pF1KSD STTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHR
1990 2000 2010 2020 2030 2040
2040 2050 2060
pF1KSD KRSSRPASASSSTKDITSAVQSKRRKSK
::::::::::::::::::::::::::::
XP_011 KRSSRPASASSSTKDITSAVQSKRRKSK
2050 2060
>>XP_006723818 (OMIM: 605299) PREDICTED: nuclear recepto (1975 aa)
initn: 13395 init1: 13395 opt: 13395 Z-score: 4633.8 bits: 870.9 E(85289): 0
Smith-Waterman score: 13395; 99.9% identity (100.0% similar) in 1965 aa overlap (1-1965:1-1965)
10 20 30 40 50 60
pF1KSD MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQAR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD QQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD PGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD VPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD MMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD MQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQV
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD MGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD ASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHF
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD GVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGISLDNSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_006 GVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD PKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD PQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMV
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD SLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KSD PSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNV
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KSD AAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KSD PPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGA
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KSD TKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVLVSPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVLVSPTP
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KSD LANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKEQVNIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKEQVNIE
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KSD LKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSGA
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KSD PNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSLV
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KSD HPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAALPTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAALPTHL
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KSD QSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPA
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KSD APLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATP
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KSD VQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSPLLTNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSPLLTNS
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KSD PGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQGLDTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQGLDTT
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KSD APGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVRSIVTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVRSIVTT
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KSD LVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKETSTTAL
:::::::::::::::::::::::::::::::::::::::::::::
XP_006 LVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAKMLRVPTTEW
1930 1940 1950 1960 1970
1990 2000 2010 2020 2030 2040
pF1KSD QASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHRKRSSR
>>XP_011527028 (OMIM: 605299) PREDICTED: nuclear recepto (2057 aa)
initn: 10445 init1: 10445 opt: 11780 Z-score: 4077.2 bits: 768.0 E(85289): 0
Smith-Waterman score: 13849; 99.2% identity (99.2% similar) in 2068 aa overlap (1-2063:1-2057)
10 20 30 40 50 60
pF1KSD MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
70 80 90 100 110 120
130 140 150 160 170
pF1KSD DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGI-----IR
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_011 DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIFFLGIIR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD LAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQ
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD QQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KSD QLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KSD TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG
430 440 450 460 470 480
480 490 500 510 520 530
pF1KSD RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPS
:::::::::::::::::::::::::::::::::: :::::::::::::::
XP_011 RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLG-----------AGQANPNFMQGQVPS
490 500 510 520
540 550 560 570 580 590
pF1KSD TTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQ
530 540 550 560 570 580
600 610 620 630 640 650
pF1KSD AGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQL
590 600 610 620 630 640
660 670 680 690 700 710
pF1KSD MPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQ
650 660 670 680 690 700
720 730 740 750 760 770
pF1KSD IMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNN
710 720 730 740 750 760
780 790 800 810 820 830
pF1KSD SPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQA
770 780 790 800 810 820
840 850 860 870 880 890
pF1KSD MQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDI
830 840 850 860 870 880
900 910 920 930 940 950
pF1KSD SAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGIS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 SAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGIN
890 900 910 920 930 940
960 970 980 990 1000 1010
pF1KSD LDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQP
950 960 970 980 990 1000
1020 1030 1040 1050 1060 1070
pF1KSD PPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGS
1010 1020 1030 1040 1050 1060
1080 1090 1100 1110 1120 1130
pF1KSD VPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEA
1070 1080 1090 1100 1110 1120
1140 1150 1160 1170 1180 1190
pF1KSD SGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGH
1130 1140 1150 1160 1170 1180
1200 1210 1220 1230 1240 1250
pF1KSD HFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQ
1190 1200 1210 1220 1230 1240
1260 1270 1280 1290 1300 1310
pF1KSD INIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 INIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQ
1250 1260 1270 1280 1290 1300
1320 1330 1340 1350 1360 1370
pF1KSD SNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVL
1310 1320 1330 1340 1350 1360
1380 1390 1400 1410 1420 1430
pF1KSD VSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKE
1370 1380 1390 1400 1410 1420
1440 1450 1460 1470 1480 1490
pF1KSD QVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLL
1430 1440 1450 1460 1470 1480
1500 1510 1520 1530 1540 1550
pF1KSD DNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNEL
1490 1500 1510 1520 1530 1540
1560 1570 1580 1590 1600 1610
pF1KSD CSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAA
1550 1560 1570 1580 1590 1600
1620 1630 1640 1650 1660 1670
pF1KSD LPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQP
1610 1620 1630 1640 1650 1660
1680 1690 1700 1710 1720 1730
pF1KSD STIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLS
1670 1680 1690 1700 1710 1720
1740 1750 1760 1770 1780 1790
pF1KSD SRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSP
1730 1740 1750 1760 1770 1780
1800 1810 1820 1830 1840 1850
pF1KSD LLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQ
1790 1800 1810 1820 1830 1840
1860 1870 1880 1890 1900 1910
pF1KSD GLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVR
1850 1860 1870 1880 1890 1900
1920 1930 1940 1950 1960 1970
pF1KSD SIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKET
1910 1920 1930 1940 1950 1960
1980 1990 2000 2010 2020 2030
pF1KSD STTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHR
1970 1980 1990 2000 2010 2020
2040 2050 2060
pF1KSD KRSSRPASASSSTKDITSAVQSKRRKSK
::::::::::::::::::::::::::::
XP_011 KRSSRPASASSSTKDITSAVQSKRRKSK
2030 2040 2050
>>XP_011527029 (OMIM: 605299) PREDICTED: nuclear recepto (2056 aa)
initn: 10420 init1: 10420 opt: 11754 Z-score: 4068.3 bits: 766.4 E(85289): 0
Smith-Waterman score: 13842; 99.1% identity (99.2% similar) in 2068 aa overlap (1-2063:1-2056)
10 20 30 40 50 60
pF1KSD MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
70 80 90 100 110 120
130 140 150 160 170
pF1KSD DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGI-----IR
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_011 DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIFFLGIIR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD LAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQ
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD QQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KSD QLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KSD TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG
430 440 450 460 470 480
480 490 500 510 520 530
pF1KSD RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPS
::::::::::::::::::::::::::::::::::: :::::::::::::
XP_011 RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGG------------QANPNFMQGQVPS
490 500 510 520
540 550 560 570 580 590
pF1KSD TTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQ
530 540 550 560 570 580
600 610 620 630 640 650
pF1KSD AGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQL
590 600 610 620 630 640
660 670 680 690 700 710
pF1KSD MPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQ
650 660 670 680 690 700
720 730 740 750 760 770
pF1KSD IMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNN
710 720 730 740 750 760
780 790 800 810 820 830
pF1KSD SPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQA
770 780 790 800 810 820
840 850 860 870 880 890
pF1KSD MQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDI
830 840 850 860 870 880
900 910 920 930 940 950
pF1KSD SAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGIS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 SAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGIN
890 900 910 920 930 940
960 970 980 990 1000 1010
pF1KSD LDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQP
950 960 970 980 990 1000
1020 1030 1040 1050 1060 1070
pF1KSD PPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGS
1010 1020 1030 1040 1050 1060
1080 1090 1100 1110 1120 1130
pF1KSD VPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEA
1070 1080 1090 1100 1110 1120
1140 1150 1160 1170 1180 1190
pF1KSD SGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGH
1130 1140 1150 1160 1170 1180
1200 1210 1220 1230 1240 1250
pF1KSD HFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQ
1190 1200 1210 1220 1230 1240
1260 1270 1280 1290 1300 1310
pF1KSD INIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 INIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQ
1250 1260 1270 1280 1290 1300
1320 1330 1340 1350 1360 1370
pF1KSD SNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVL
1310 1320 1330 1340 1350 1360
1380 1390 1400 1410 1420 1430
pF1KSD VSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKE
1370 1380 1390 1400 1410 1420
1440 1450 1460 1470 1480 1490
pF1KSD QVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLL
1430 1440 1450 1460 1470 1480
1500 1510 1520 1530 1540 1550
pF1KSD DNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNEL
1490 1500 1510 1520 1530 1540
1560 1570 1580 1590 1600 1610
pF1KSD CSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAA
1550 1560 1570 1580 1590 1600
1620 1630 1640 1650 1660 1670
pF1KSD LPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQP
1610 1620 1630 1640 1650 1660
1680 1690 1700 1710 1720 1730
pF1KSD STIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLS
1670 1680 1690 1700 1710 1720
1740 1750 1760 1770 1780 1790
pF1KSD SRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSP
1730 1740 1750 1760 1770 1780
1800 1810 1820 1830 1840 1850
pF1KSD LLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQ
1790 1800 1810 1820 1830 1840
1860 1870 1880 1890 1900 1910
pF1KSD GLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVR
1850 1860 1870 1880 1890 1900
1920 1930 1940 1950 1960 1970
pF1KSD SIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKET
1910 1920 1930 1940 1950 1960
1980 1990 2000 2010 2020 2030
pF1KSD STTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHR
1970 1980 1990 2000 2010 2020
2040 2050 2060
pF1KSD KRSSRPASASSSTKDITSAVQSKRRKSK
::::::::::::::::::::::::::::
XP_011 KRSSRPASASSSTKDITSAVQSKRRKSK
2030 2040 2050
>>XP_016883233 (OMIM: 605299) PREDICTED: nuclear recepto (2051 aa)
initn: 10420 init1: 10420 opt: 10674 Z-score: 3696.2 bits: 697.5 E(85289): 3.8e-199
Smith-Waterman score: 13862; 99.4% identity (99.4% similar) in 2063 aa overlap (1-2063:1-2051)
10 20 30 40 50 60
pF1KSD MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD TVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQAR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD QQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATT
:::::::::::::::::::::::::::::: ::::::::::::::::::
XP_016 QQGNVPPNFMVMQQQPPNQGPQSLHPGLGG------------QANPNFMQGQVPSTTATT
490 500 510 520
550 560 570 580 590 600
pF1KSD PGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSG
530 540 550 560 570 580
610 620 630 640 650 660
pF1KSD VPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQ
590 600 610 620 630 640
670 680 690 700 710 720
pF1KSD MMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQ
650 660 670 680 690 700
730 740 750 760 770 780
pF1KSD MQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQV
710 720 730 740 750 760
790 800 810 820 830 840
pF1KSD MGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNS
770 780 790 800 810 820
850 860 870 880 890 900
pF1KSD ASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHF
830 840 850 860 870 880
910 920 930 940 950 960
pF1KSD GVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGISLDNSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_016 GVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSG
890 900 910 920 930 940
970 980 990 1000 1010 1020
pF1KSD PKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ
950 960 970 980 990 1000
1030 1040 1050 1060 1070 1080
pF1KSD PQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMV
1010 1020 1030 1040 1050 1060
1090 1100 1110 1120 1130 1140
pF1KSD SLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEA
1070 1080 1090 1100 1110 1120
1150 1160 1170 1180 1190 1200
pF1KSD PSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNV
1130 1140 1150 1160 1170 1180
1210 1220 1230 1240 1250 1260
pF1KSD AAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPL
1190 1200 1210 1220 1230 1240
1270 1280 1290 1300 1310 1320
pF1KSD PPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGA
1250 1260 1270 1280 1290 1300
1330 1340 1350 1360 1370 1380
pF1KSD TKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVLVSPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVLVSPTP
1310 1320 1330 1340 1350 1360
1390 1400 1410 1420 1430 1440
pF1KSD LANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKEQVNIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKEQVNIE
1370 1380 1390 1400 1410 1420
1450 1460 1470 1480 1490 1500
pF1KSD LKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSGA
1430 1440 1450 1460 1470 1480
1510 1520 1530 1540 1550 1560
pF1KSD PNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSLV
1490 1500 1510 1520 1530 1540
1570 1580 1590 1600 1610 1620
pF1KSD HPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAALPTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSANTSAALPTHL
1550 1560 1570 1580 1590 1600
1630 1640 1650 1660 1670 1680
pF1KSD QSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPA
1610 1620 1630 1640 1650 1660
1690 1700 1710 1720 1730 1740
pF1KSD APLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATP
1670 1680 1690 1700 1710 1720
1750 1760 1770 1780 1790 1800
pF1KSD VQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSPLLTNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSPLLTNS
1730 1740 1750 1760 1770 1780
1810 1820 1830 1840 1850 1860
pF1KSD PGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQGLDTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQGLDTT
1790 1800 1810 1820 1830 1840
1870 1880 1890 1900 1910 1920
pF1KSD APGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVRSIVTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVRSIVTT
1850 1860 1870 1880 1890 1900
1930 1940 1950 1960 1970 1980
pF1KSD LVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKETSTTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELLPSIAPSQNLVSKETSTTAL
1910 1920 1930 1940 1950 1960
1990 2000 2010 2020 2030 2040
pF1KSD QASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHRKRSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTEEPTVASESVENGHRKRSSR
1970 1980 1990 2000 2010 2020
2050 2060
pF1KSD PASASSSTKDITSAVQSKRRKSK
:::::::::::::::::::::::
XP_016 PASASSSTKDITSAVQSKRRKSK
2030 2040 2050
>>XP_016883234 (OMIM: 605299) PREDICTED: nuclear recepto (2039 aa)
initn: 12475 init1: 10349 opt: 10612 Z-score: 3674.9 bits: 693.6 E(85289): 5.9e-198
Smith-Waterman score: 13456; 96.6% identity (96.8% similar) in 2082 aa overlap (1-2063:1-2039)
10 20 30 40 50 60
pF1KSD MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIRMNNPA
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGP---------
130 140 150 160 170
190 200 210 220 230 240
pF1KSD TVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPH
::::::::::::::::::::::::::
XP_016 ----------------------------------DAMDPLLSGLHIQQQSHPSGSLAPPH
180 190
250 260 270 280 290 300
pF1KSD HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ
200 210 220 230 240 250
310 320 330 340 350 360
pF1KSD GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQAR
260 270 280 290 300 310
370 380 390 400 410 420
pF1KSD PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQ
320 330 340 350 360 370
430 440 450 460 470 480
pF1KSD PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMV
380 390 400 410 420 430
490 500 510 520
pF1KSD QQGNVPPNFMVMQQQPPNQGPQSLHPGLG--GMPKRLP---PG---------FS-----A
::::::::::::::::::::::::::::: . :. : : :: .
XP_016 QQGNVPPNFMVMQQQPPNQGPQSLHPGLGEKSEPSNLAVAWPQITFREQIAIFSLACSKS
440 450 460 470 480 490
530 540 550 560 570 580
pF1KSD GQANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQ
500 510 520 530 540 550
590 600 610 620 630 640
pF1KSD PSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGT
560 570 580 590 600 610
650 660 670 680 690 700
pF1KSD LNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGP
620 630 640 650 660 670
710 720 730 740 750 760
pF1KSD QGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQFTGQ
680 690 700 710 720 730
770 780 790 800 810 820
pF1KSD MSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDV
740 750 760 770 780 790
830 840 850 860 870 880
pF1KSD SIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPVNKDVT
800 810 820 830 840 850
890 900 910 920 930 940
pF1KSD LTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLE
860 870 880 890 900 910
950 960 970 980 990 1000
pF1KSD EADQPPLPGEQGISLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPP
:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EADQPPLPGEQGINLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPP
920 930 940 950 960 970
1010 1020 1030 1040 1050 1060
pF1KSD QQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPL
980 990 1000 1010 1020 1030
1070 1080 1090 1100 1110 1120
pF1KSD NPDSQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPDSQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNP
1040 1050 1060 1070 1080 1090
1130 1140 1150 1160 1170 1180
pF1KSD SSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATP
1100 1110 1120 1130 1140 1150
1190 1200 1210 1220 1230 1240
pF1KSD QQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSP
1160 1170 1180 1190 1200 1210
1250 1260 1270 1280 1290 1300
pF1KSD ERLNASIAGLFPPQINIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERLNASIAGLFPPQINIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQ
1220 1230 1240 1250 1260 1270
1310 1320 1330 1340 1350 1360
pF1KSD THKLDSVVVNSGKQSNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 THKLDSVVVNSGKQSNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTN
1280 1290 1300 1310 1320 1330
1370 1380 1390 1400 1410 1420
pF1KSD AALLQNVELPRNVLVSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AALLQNVELPRNVLVSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNV
1340 1350 1360 1370 1380 1390
1430 1440 1450 1460 1470 1480
pF1KSD PQDSDCQNSQSRKEQVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQDSDCQNSQSRKEQVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVS
1400 1410 1420 1430 1440 1450
1490 1500 1510 1520 1530 1540
pF1KSD PAMREAPTSLSQLLDNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAMREAPTSLSQLLDNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSK
1460 1470 1480 1490 1500 1510
1550 1560 1570 1580 1590 1600
pF1KSD EPSNSLNLPHSNELCSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPSNSLNLPHSNELCSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFV
1520 1530 1540 1550 1560 1570
1610 1620 1630 1640 1650 1660
pF1KSD TSNPITTSANTSAALPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSNPITTSANTSAALPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFI
1580 1590 1600 1610 1620 1630
1670 1680 1690 1700 1710 1720
pF1KSD NSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSS
1640 1650 1660 1670 1680 1690
1730 1740 1750 1760 1770 1780
pF1KSD PAPNIQTGRPLVLSSRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAPNIQTGRPLVLSSRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQ
1700 1710 1720 1730 1740 1750
1790 1800 1810 1820 1830 1840
pF1KSD NTLPSSQSTTMVSPLLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NTLPSSQSTTMVSPLLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEK
1760 1770 1780 1790 1800 1810
1850 1860 1870 1880 1890 1900
pF1KSD GEEQYGADGETEGQGLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEEQYGADGETEGQGLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASA
1820 1830 1840 1850 1860 1870
1910 1920 1930 1940 1950 1960
pF1KSD GPSLPGGALPTSVRSIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPSLPGGALPTSVRSIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHPELL
1880 1890 1900 1910 1920 1930
1970 1980 1990 2000 2010 2020
pF1KSD PSIAPSQNLVSKETSTTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSIAPSQNLVSKETSTTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRRNSRTE
1940 1950 1960 1970 1980 1990
2030 2040 2050 2060
pF1KSD EPTVASESVENGHRKRSSRPASASSSTKDITSAVQSKRRKSK
::::::::::::::::::::::::::::::::::::::::::
XP_016 EPTVASESVENGHRKRSSRPASASSSTKDITSAVQSKRRKSK
2000 2010 2020 2030
>>XP_016883228 (OMIM: 605299) PREDICTED: nuclear recepto (2087 aa)
initn: 12767 init1: 10349 opt: 10608 Z-score: 3673.4 bits: 693.3 E(85289): 7.2e-198
Smith-Waterman score: 13831; 98.5% identity (98.7% similar) in 2087 aa overlap (1-2063:1-2087)
10 20 30 40 50 60
pF1KSD MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
70 80 90 100 110 120
130 140 150 160 170
pF1KSD DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGI-----IR
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_016 DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIFFLGIIR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD LAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQ
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD QQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KSD QLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KSD TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG
430 440 450 460 470 480
480 490 500 510 520
pF1KSD RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLG--GMPKRLP---PG---------FS-
:::::::::::::::::::::::::::::::::: . :. : : ::
XP_016 RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGEKSEPSNLAVAWPQITFREQIAIFSL
490 500 510 520 530 540
530 540 550 560 570
pF1KSD ----AGQANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGP
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACSKSGQANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGP
550 560 570 580 590 600
580 590 600 610 620 630
pF1KSD PNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMV
610 620 630 640 650 660
640 650 660 670 680 690
pF1KSD QQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHN
670 680 690 700 710 720
700 710 720 730 740 750
pF1KSD QMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMV
730 740 750 760 770 780
760 770 780 790 800 810
pF1KSD QFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQ
790 800 810 820 830 840
820 830 840 850 860 870
pF1KSD MMPDVSIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPDVSIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPV
850 860 870 880 890 900
880 890 900 910 920 930
pF1KSD NKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTR
910 920 930 940 950 960
940 950 960 970 980 990
pF1KSD PAGLEEADQPPLPGEQGISLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAP
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
XP_016 PAGLEEADQPPLPGEQGINLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAP
970 980 990 1000 1010 1020
1000 1010 1020 1030 1040 1050
pF1KSD PPQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHP
1030 1040 1050 1060 1070 1080
1060 1070 1080 1090 1100 1110
pF1KSD PRGPLNPDSQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRGPLNPDSQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQE
1090 1100 1110 1120 1130 1140
1120 1130 1140 1150 1160 1170
pF1KSD SPQNPSSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPQNPSSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSAT
1150 1160 1170 1180 1190 1200
1180 1190 1200 1210 1220 1230
pF1KSD QGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSE
1210 1220 1230 1240 1250 1260
1240 1250 1260 1270 1280 1290
pF1KSD ISLSPERLNASIAGLFPPQINIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISLSPERLNASIAGLFPPQINIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSN
1270 1280 1290 1300 1310 1320
1300 1310 1320 1330 1340 1350
pF1KSD FATPQTHKLDSVVVNSGKQSNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FATPQTHKLDSVVVNSGKQSNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTL
1330 1340 1350 1360 1370 1380
1360 1370 1380 1390 1400 1410
pF1KSD ASQTNAALLQNVELPRNVLVSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASQTNAALLQNVELPRNVLVSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNK
1390 1400 1410 1420 1430 1440
1420 1430 1440 1450 1460 1470
pF1KSD ESLNVPQDSDCQNSQSRKEQVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESLNVPQDSDCQNSQSRKEQVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEEN
1450 1460 1470 1480 1490 1500
1480 1490 1500 1510 1520 1530
pF1KSD KNLVSPAMREAPTSLSQLLDNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KNLVSPAMREAPTSLSQLLDNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQD
1510 1520 1530 1540 1550 1560
1540 1550 1560 1570 1580 1590
pF1KSD LSSSKEPSNSLNLPHSNELCSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSSSKEPSNSLNLPHSNELCSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQ
1570 1580 1590 1600 1610 1620
1600 1610 1620 1630 1640 1650
pF1KSD ITVFVTSNPITTSANTSAALPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ITVFVTSNPITTSANTSAALPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFI
1630 1640 1650 1660 1670 1680
1660 1670 1680 1690 1700 1710
pF1KSD TPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPN
1690 1700 1710 1720 1730 1740
1720 1730 1740 1750 1760 1770
pF1KSD ALSSSPAPNIQTGRPLVLSSRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSSSPAPNIQTGRPLVLSSRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVN
1750 1760 1770 1780 1790 1800
1780 1790 1800 1810 1820 1830
pF1KSD TSADQNTLPSSQSTTMVSPLLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSADQNTLPSSQSTTMVSPLLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVT
1810 1820 1830 1840 1850 1860
1840 1850 1860 1870 1880 1890
pF1KSD GSLEKGEEQYGADGETEGQGLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSLEKGEEQYGADGETEGQGLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGP
1870 1880 1890 1900 1910 1920
1900 1910 1920 1930 1940 1950
pF1KSD GTASAGPSLPGGALPTSVRSIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTASAGPSLPGGALPTSVRSIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGS
1930 1940 1950 1960 1970 1980
1960 1970 1980 1990 2000 2010
pF1KSD HPELLPSIAPSQNLVSKETSTTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPELLPSIAPSQNLVSKETSTTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRR
1990 2000 2010 2020 2030 2040
2020 2030 2040 2050 2060
pF1KSD NSRTEEPTVASESVENGHRKRSSRPASASSSTKDITSAVQSKRRKSK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSRTEEPTVASESVENGHRKRSSRPASASSSTKDITSAVQSKRRKSK
2050 2060 2070 2080
>>XP_016883229 (OMIM: 605299) PREDICTED: nuclear recepto (2087 aa)
initn: 12767 init1: 10349 opt: 10608 Z-score: 3673.4 bits: 693.3 E(85289): 7.2e-198
Smith-Waterman score: 13831; 98.5% identity (98.7% similar) in 2087 aa overlap (1-2063:1-2087)
10 20 30 40 50 60
pF1KSD MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILEDSTIFVAFKGNIDDKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLR
70 80 90 100 110 120
130 140 150 160 170
pF1KSD DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGI-----IR
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_016 DLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIFFLGIIR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD LAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQ
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD QQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KSD QLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KSD TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG
430 440 450 460 470 480
480 490 500 510 520
pF1KSD RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLG--GMPKRLP---PG---------FS-
:::::::::::::::::::::::::::::::::: . :. : : ::
XP_016 RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGEKSEPSNLAVAWPQITFREQIAIFSL
490 500 510 520 530 540
530 540 550 560 570
pF1KSD ----AGQANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGP
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACSKSGQANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGP
550 560 570 580 590 600
580 590 600 610 620 630
pF1KSD PNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMV
610 620 630 640 650 660
640 650 660 670 680 690
pF1KSD QQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHN
670 680 690 700 710 720
700 710 720 730 740 750
pF1KSD QMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMV
730 740 750 760 770 780
760 770 780 790 800 810
pF1KSD QFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQ
790 800 810 820 830 840
820 830 840 850 860 870
pF1KSD MMPDVSIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPDVSIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFSGAPNGNQMSCGQNPGFPV
850 860 870 880 890 900
880 890 900 910 920 930
pF1KSD NKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTR
910 920 930 940 950 960
940 950 960 970 980 990
pF1KSD PAGLEEADQPPLPGEQGISLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAP
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
XP_016 PAGLEEADQPPLPGEQGINLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAP
970 980 990 1000 1010 1020
1000 1010 1020 1030 1040 1050
pF1KSD PPQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHP
1030 1040 1050 1060 1070 1080
1060 1070 1080 1090 1100 1110
pF1KSD PRGPLNPDSQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRGPLNPDSQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQE
1090 1100 1110 1120 1130 1140
1120 1130 1140 1150 1160 1170
pF1KSD SPQNPSSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPQNPSSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSAT
1150 1160 1170 1180 1190 1200
1180 1190 1200 1210 1220 1230
pF1KSD QGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSE
1210 1220 1230 1240 1250 1260
1240 1250 1260 1270 1280 1290
pF1KSD ISLSPERLNASIAGLFPPQINIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISLSPERLNASIAGLFPPQINIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSN
1270 1280 1290 1300 1310 1320
1300 1310 1320 1330 1340 1350
pF1KSD FATPQTHKLDSVVVNSGKQSNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FATPQTHKLDSVVVNSGKQSNSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTL
1330 1340 1350 1360 1370 1380
1360 1370 1380 1390 1400 1410
pF1KSD ASQTNAALLQNVELPRNVLVSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASQTNAALLQNVELPRNVLVSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNK
1390 1400 1410 1420 1430 1440
1420 1430 1440 1450 1460 1470
pF1KSD ESLNVPQDSDCQNSQSRKEQVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESLNVPQDSDCQNSQSRKEQVNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEEN
1450 1460 1470 1480 1490 1500
1480 1490 1500 1510 1520 1530
pF1KSD KNLVSPAMREAPTSLSQLLDNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KNLVSPAMREAPTSLSQLLDNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQD
1510 1520 1530 1540 1550 1560
1540 1550 1560 1570 1580 1590
pF1KSD LSSSKEPSNSLNLPHSNELCSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSSSKEPSNSLNLPHSNELCSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQ
1570 1580 1590 1600 1610 1620
1600 1610 1620 1630 1640 1650
pF1KSD ITVFVTSNPITTSANTSAALPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ITVFVTSNPITTSANTSAALPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFI
1630 1640 1650 1660 1670 1680
1660 1670 1680 1690 1700 1710
pF1KSD TPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPN
1690 1700 1710 1720 1730 1740
1720 1730 1740 1750 1760 1770
pF1KSD ALSSSPAPNIQTGRPLVLSSRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSSSPAPNIQTGRPLVLSSRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVN
1750 1760 1770 1780 1790 1800
1780 1790 1800 1810 1820 1830
pF1KSD TSADQNTLPSSQSTTMVSPLLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSADQNTLPSSQSTTMVSPLLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVT
1810 1820 1830 1840 1850 1860
1840 1850 1860 1870 1880 1890
pF1KSD GSLEKGEEQYGADGETEGQGLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSLEKGEEQYGADGETEGQGLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGP
1870 1880 1890 1900 1910 1920
1900 1910 1920 1930 1940 1950
pF1KSD GTASAGPSLPGGALPTSVRSIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTASAGPSLPGGALPTSVRSIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGS
1930 1940 1950 1960 1970 1980
1960 1970 1980 1990 2000 2010
pF1KSD HPELLPSIAPSQNLVSKETSTTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPELLPSIAPSQNLVSKETSTTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRR
1990 2000 2010 2020 2030 2040
2020 2030 2040 2050 2060
pF1KSD NSRTEEPTVASESVENGHRKRSSRPASASSSTKDITSAVQSKRRKSK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSRTEEPTVASESVENGHRKRSSRPASASSSTKDITSAVQSKRRKSK
2050 2060 2070 2080
2063 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:31:08 2016 done: Thu Nov 3 00:31:12 2016
Total Scan time: 24.760 Total Display time: 1.780
Function used was FASTA [36.3.4 Apr, 2011]