Result of FASTA (omim) for
pF1KSDA0205
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0205, 370 aa
1>>>pF1KSDA0205 370 - 370 aa - 370 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8055+/-0.000433; mu= 19.0286+/- 0.027
mean_var=63.3157+/-13.112, 0's: 0 Z-trim(110.0): 47 B-trim: 223 in 2/52
Lambda= 0.161183
statistics sampled from 18236 (18282) to 18236 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.578), E-opt: 0.2 (0.214), width: 16
Scan time: 5.640
The best scores are: opt bits E(85289)
XP_011508531 (OMIM: 610473) PREDICTED: acyl-CoA:ly ( 370) 2527 596.7 2.8e-170
NP_001307737 (OMIM: 610473) acyl-CoA:lysophosphati ( 370) 2527 596.7 2.8e-170
XP_011508530 (OMIM: 610473) PREDICTED: acyl-CoA:ly ( 370) 2527 596.7 2.8e-170
NP_055688 (OMIM: 610473) acyl-CoA:lysophosphatidyl ( 370) 2527 596.7 2.8e-170
XP_005273419 (OMIM: 610473) PREDICTED: acyl-CoA:ly ( 403) 2527 596.7 2.9e-170
XP_016858493 (OMIM: 610473) PREDICTED: acyl-CoA:ly ( 334) 1999 473.9 2.3e-133
XP_011531046 (OMIM: 614241) PREDICTED: lysocardiol ( 252) 151 44.1 0.00043
NP_001291375 (OMIM: 614241) lysocardiolipin acyltr ( 252) 151 44.1 0.00043
XP_011531044 (OMIM: 614241) PREDICTED: lysocardiol ( 376) 151 44.2 0.00059
XP_016859235 (OMIM: 614241) PREDICTED: lysocardiol ( 376) 151 44.2 0.00059
NP_001002257 (OMIM: 614241) lysocardiolipin acyltr ( 376) 151 44.2 0.00059
XP_011531045 (OMIM: 614241) PREDICTED: lysocardiol ( 376) 151 44.2 0.00059
XP_005264302 (OMIM: 614241) PREDICTED: lysocardiol ( 376) 151 44.2 0.00059
NP_001291374 (OMIM: 614241) lysocardiolipin acyltr ( 376) 151 44.2 0.00059
XP_011531043 (OMIM: 614241) PREDICTED: lysocardiol ( 414) 151 44.2 0.00063
NP_872357 (OMIM: 614241) lysocardiolipin acyltrans ( 414) 151 44.2 0.00063
XP_005264301 (OMIM: 614241) PREDICTED: lysocardiol ( 414) 151 44.2 0.00063
XP_005267110 (OMIM: 614795) PREDICTED: 1-acyl-sn-g ( 244) 133 39.9 0.0076
XP_016866548 (OMIM: 614795) PREDICTED: 1-acyl-sn-g ( 244) 133 39.9 0.0076
XP_006715577 (OMIM: 614795) PREDICTED: 1-acyl-sn-g ( 324) 133 40.0 0.0095
>>XP_011508531 (OMIM: 610473) PREDICTED: acyl-CoA:lysoph (370 aa)
initn: 2527 init1: 2527 opt: 2527 Z-score: 3178.2 bits: 596.7 E(85289): 2.8e-170
Smith-Waterman score: 2527; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370)
10 20 30 40 50 60
pF1KSD MAITLEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQPLRVLDSKRFWYIEGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAITLEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQPLRVLDSKRFWYIEGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD MYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD VAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLENNYRSRDRKWIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLENNYRSRDRKWIV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LFPEGGFLRKRRETSQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQKNGSPAGGDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFPEGGFLRKRRETSQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQKNGSPAGGDAK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPIKDVPLETDDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPIKDVPLETDDLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD TWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSREMTLSNLWIFLIQSFAFLSGYMWYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSREMTLSNLWIFLIQSFAFLSGYMWYN
310 320 330 340 350 360
370
pF1KSD IIQYFYHCLF
::::::::::
XP_011 IIQYFYHCLF
370
>>NP_001307737 (OMIM: 610473) acyl-CoA:lysophosphatidylg (370 aa)
initn: 2527 init1: 2527 opt: 2527 Z-score: 3178.2 bits: 596.7 E(85289): 2.8e-170
Smith-Waterman score: 2527; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370)
10 20 30 40 50 60
pF1KSD MAITLEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQPLRVLDSKRFWYIEGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAITLEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQPLRVLDSKRFWYIEGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD MYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD VAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLENNYRSRDRKWIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLENNYRSRDRKWIV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LFPEGGFLRKRRETSQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQKNGSPAGGDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFPEGGFLRKRRETSQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQKNGSPAGGDAK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPIKDVPLETDDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPIKDVPLETDDLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD TWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSREMTLSNLWIFLIQSFAFLSGYMWYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSREMTLSNLWIFLIQSFAFLSGYMWYN
310 320 330 340 350 360
370
pF1KSD IIQYFYHCLF
::::::::::
NP_001 IIQYFYHCLF
370
>>XP_011508530 (OMIM: 610473) PREDICTED: acyl-CoA:lysoph (370 aa)
initn: 2527 init1: 2527 opt: 2527 Z-score: 3178.2 bits: 596.7 E(85289): 2.8e-170
Smith-Waterman score: 2527; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370)
10 20 30 40 50 60
pF1KSD MAITLEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQPLRVLDSKRFWYIEGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAITLEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQPLRVLDSKRFWYIEGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD MYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD VAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLENNYRSRDRKWIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLENNYRSRDRKWIV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LFPEGGFLRKRRETSQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQKNGSPAGGDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFPEGGFLRKRRETSQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQKNGSPAGGDAK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPIKDVPLETDDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPIKDVPLETDDLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD TWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSREMTLSNLWIFLIQSFAFLSGYMWYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSREMTLSNLWIFLIQSFAFLSGYMWYN
310 320 330 340 350 360
370
pF1KSD IIQYFYHCLF
::::::::::
XP_011 IIQYFYHCLF
370
>>NP_055688 (OMIM: 610473) acyl-CoA:lysophosphatidylglyc (370 aa)
initn: 2527 init1: 2527 opt: 2527 Z-score: 3178.2 bits: 596.7 E(85289): 2.8e-170
Smith-Waterman score: 2527; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370)
10 20 30 40 50 60
pF1KSD MAITLEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQPLRVLDSKRFWYIEGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MAITLEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQPLRVLDSKRFWYIEGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD MYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD VAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLENNYRSRDRKWIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLENNYRSRDRKWIV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LFPEGGFLRKRRETSQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQKNGSPAGGDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LFPEGGFLRKRRETSQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQKNGSPAGGDAK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPIKDVPLETDDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPIKDVPLETDDLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD TWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSREMTLSNLWIFLIQSFAFLSGYMWYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSREMTLSNLWIFLIQSFAFLSGYMWYN
310 320 330 340 350 360
370
pF1KSD IIQYFYHCLF
::::::::::
NP_055 IIQYFYHCLF
370
>>XP_005273419 (OMIM: 610473) PREDICTED: acyl-CoA:lysoph (403 aa)
initn: 2527 init1: 2527 opt: 2527 Z-score: 3177.6 bits: 596.7 E(85289): 2.9e-170
Smith-Waterman score: 2527; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:34-403)
10 20 30
pF1KSD MAITLEEAPWLGWLLVKALMRFAFMVVNNL
::::::::::::::::::::::::::::::
XP_005 TPRRGTPAPALRSRPPSAPAEKDRTESSVRMAITLEEAPWLGWLLVKALMRFAFMVVNNL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KSD VAIPSYICYVIILQPLRVLDSKRFWYIEGIMYKWLLGMVASWGWYAGYTVMEWGEDIKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAIPSYICYVIILQPLRVLDSKRFWYIEGIMYKWLLGMVASWGWYAGYTVMEWGEDIKAV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KSD SKDEAVMLVNHQATGDVCTLMMCLQDKGLVVAQMMWLMDHIFKYTNFGIVSLVHGDFFIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SKDEAVMLVNHQATGDVCTLMMCLQDKGLVVAQMMWLMDHIFKYTNFGIVSLVHGDFFIR
130 140 150 160 170 180
160 170 180 190 200 210
pF1KSD QGRSYRDQQLLLLKKHLENNYRSRDRKWIVLFPEGGFLRKRRETSQAFAKKNNLPFLTNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGRSYRDQQLLLLKKHLENNYRSRDRKWIVLFPEGGFLRKRRETSQAFAKKNNLPFLTNV
190 200 210 220 230 240
220 230 240 250 260 270
pF1KSD TLPRSGATKIILNALVAQQKNGSPAGGDAKELDSKSKGLQWIIDTTIAYPKAEPIDIQTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TLPRSGATKIILNALVAQQKNGSPAGGDAKELDSKSKGLQWIIDTTIAYPKAEPIDIQTW
250 260 270 280 290 300
280 290 300 310 320 330
pF1KSD ILGYRKPTVTHVHYRIFPIKDVPLETDDLTTWLYQRFVEKEDLLSHFYETGAFPPSKGHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ILGYRKPTVTHVHYRIFPIKDVPLETDDLTTWLYQRFVEKEDLLSHFYETGAFPPSKGHK
310 320 330 340 350 360
340 350 360 370
pF1KSD EAVSREMTLSNLWIFLIQSFAFLSGYMWYNIIQYFYHCLF
::::::::::::::::::::::::::::::::::::::::
XP_005 EAVSREMTLSNLWIFLIQSFAFLSGYMWYNIIQYFYHCLF
370 380 390 400
>>XP_016858493 (OMIM: 610473) PREDICTED: acyl-CoA:lysoph (334 aa)
initn: 1997 init1: 1997 opt: 1999 Z-score: 2515.2 bits: 473.9 E(85289): 2.3e-133
Smith-Waterman score: 1999; 97.7% identity (98.0% similar) in 304 aa overlap (67-370:31-334)
40 50 60 70 80 90
pF1KSD ICYVIILQPLRVLDSKRFWYIEGIMYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAV
: :: . :: ::::::::::::::::::
XP_016 MPPHPANFKFFYRDRSHFVAQTGPELLASRGPPASASQSAGITVMEWGEDIKAVSKDEAV
10 20 30 40 50 60
100 110 120 130 140 150
pF1KSD MLVNHQATGDVCTLMMCLQDKGLVVAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLVNHQATGDVCTLMMCLQDKGLVVAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYR
70 80 90 100 110 120
160 170 180 190 200 210
pF1KSD DQQLLLLKKHLENNYRSRDRKWIVLFPEGGFLRKRRETSQAFAKKNNLPFLTNVTLPRSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DQQLLLLKKHLENNYRSRDRKWIVLFPEGGFLRKRRETSQAFAKKNNLPFLTNVTLPRSG
130 140 150 160 170 180
220 230 240 250 260 270
pF1KSD ATKIILNALVAQQKNGSPAGGDAKELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATKIILNALVAQQKNGSPAGGDAKELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRK
190 200 210 220 230 240
280 290 300 310 320 330
pF1KSD PTVTHVHYRIFPIKDVPLETDDLTTWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTVTHVHYRIFPIKDVPLETDDLTTWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSRE
250 260 270 280 290 300
340 350 360 370
pF1KSD MTLSNLWIFLIQSFAFLSGYMWYNIIQYFYHCLF
::::::::::::::::::::::::::::::::::
XP_016 MTLSNLWIFLIQSFAFLSGYMWYNIIQYFYHCLF
310 320 330
>>XP_011531046 (OMIM: 614241) PREDICTED: lysocardiolipin (252 aa)
initn: 151 init1: 94 opt: 151 Z-score: 194.5 bits: 44.1 E(85289): 0.00043
Smith-Waterman score: 205; 27.8% identity (55.1% similar) in 198 aa overlap (179-366:36-212)
150 160 170 180 190 200
pF1KSD IRQGRSYRDQQLLLLKKHLENNYRSRDRKWIVLFPEGGFLRKRRET-SQAFAKKNNLPFL
...:::: : . .. :.:::.::.:
XP_011 YIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAFAEKNGLQKY
10 20 30 40 50 60
210 220 230 240 250 260
pF1KSD TNVTLPRSGATKIILNALVAQQKNGSPAGGDAKELDSKSKGLQWIIDTTIAYPKAEPIDI
: ::. . .... : ..: :.::. . : :.:::. : .
XP_011 EYVLHPRTTGFTFVVDRL----REG-------KNLDA-------VHDITVAYPHNIPQSE
70 80 90 100
270 280 290 300 310 320
pF1KSD QTWILGYRKPTVTHVHYRIFPIKDVPLETDDLTTWLYQRFVEKEDLLSHFYE-------T
. . : : : : . .:: .: .:: : ..:. :::. : ::. :
XP_011 KHLLQG-DFPREIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFT
110 120 130 140 150 160
330 340 350 360 370
pF1KSD G--AFPPSKGHKEAVSREMTLSNLWIFLIQSFAFLSGYMWYNIIQYFYHCLF
: ..:: :.. ... .. :: :. :.. : :. :.......
XP_011 GQSVIPPCKSELRVLVVKL-LSILYWTLFSPAMCLLIYL-YSLVKWYFIITIVIFVLQER
170 180 190 200 210 220
XP_011 IFGGLEIIELACYRLLHKQPHLNSKKNE
230 240 250
>>NP_001291375 (OMIM: 614241) lysocardiolipin acyltransf (252 aa)
initn: 151 init1: 94 opt: 151 Z-score: 194.5 bits: 44.1 E(85289): 0.00043
Smith-Waterman score: 205; 27.8% identity (55.1% similar) in 198 aa overlap (179-366:36-212)
150 160 170 180 190 200
pF1KSD IRQGRSYRDQQLLLLKKHLENNYRSRDRKWIVLFPEGGFLRKRRET-SQAFAKKNNLPFL
...:::: : . .. :.:::.::.:
NP_001 YIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAFAEKNGLQKY
10 20 30 40 50 60
210 220 230 240 250 260
pF1KSD TNVTLPRSGATKIILNALVAQQKNGSPAGGDAKELDSKSKGLQWIIDTTIAYPKAEPIDI
: ::. . .... : ..: :.::. . : :.:::. : .
NP_001 EYVLHPRTTGFTFVVDRL----REG-------KNLDA-------VHDITVAYPHNIPQSE
70 80 90 100
270 280 290 300 310 320
pF1KSD QTWILGYRKPTVTHVHYRIFPIKDVPLETDDLTTWLYQRFVEKEDLLSHFYE-------T
. . : : : : . .:: .: .:: : ..:. :::. : ::. :
NP_001 KHLLQG-DFPREIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFT
110 120 130 140 150 160
330 340 350 360 370
pF1KSD G--AFPPSKGHKEAVSREMTLSNLWIFLIQSFAFLSGYMWYNIIQYFYHCLF
: ..:: :.. ... .. :: :. :.. : :. :.......
NP_001 GQSVIPPCKSELRVLVVKL-LSILYWTLFSPAMCLLIYL-YSLVKWYFIITIVIFVLQER
170 180 190 200 210 220
NP_001 IFGGLEIIELACYRLLHKQPHLNSKKNE
230 240 250
>>XP_011531044 (OMIM: 614241) PREDICTED: lysocardiolipin (376 aa)
initn: 188 init1: 94 opt: 151 Z-score: 192.1 bits: 44.2 E(85289): 0.00059
Smith-Waterman score: 259; 24.9% identity (52.9% similar) in 350 aa overlap (35-366:17-336)
10 20 30 40 50 60
pF1KSD LEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQP----LRVLDSKRFWYIEGI
:.. ...:.: . : : : . .
XP_011 MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWINNRL
10 20 30 40
70 80 90 100 110 120
pF1KSD MYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLV
. :: :: . : :. :. . : ...:...::.. : : ::. . .
XP_011 VATWLTLPVALLETMFGVKVIITGDAF--VPGERSVIIMNHRTRMDWMFLWNCLMRYSYL
50 60 70 80 90 100
130 140 150 160 170
pF1KSD VAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLEN--NYRS--RDR
. . : . .:: . . . .::. :...:. :.:.:. .: ..
XP_011 RLEKICLKASLKGVPGFGWAMQAAAYIFIH--RKWKDD-----KSHFEDMIDYFCDIHEP
110 120 130 140 150
180 190 200 210 220 230
pF1KSD KWIVLFPEGGFLRKRRET-SQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQKNGSPA
...:::: : . .. :.:::.::.: : ::. . .... : ..:
XP_011 LQLLIFPEGTDLTENSKSRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRL----REG---
160 170 180 190 200 210
240 250 260 270 280 290
pF1KSD GGDAKELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPIKDVPLE
:.::. . : :.:::. : . . . : : : : . .:: .:
XP_011 ----KNLDA-------VHDITVAYPHNIPQSEKHLLQG-DFPREIHFHVHRYPIDTLPTS
220 230 240 250
300 310 320 330 340
pF1KSD TDDLTTWLYQRFVEKEDLLSHFYE-------TG--AFPPSKGHKEAVSREMTLSNLWIFL
.:: : ..:. :::. : ::. :: ..:: :.. ... .. :: :. :
XP_011 KEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKSELRVLVVKL-LSILYWTL
260 270 280 290 300 310
350 360 370
pF1KSD IQSFAFLSGYMWYNIIQYFYHCLF
.. : :. :.......
XP_011 FSPAMCLLIYL-YSLVKWYFIITIVIFVLQERIFGGLEIIELACYRLLHKQPHLNSKKNE
320 330 340 350 360 370
>>XP_016859235 (OMIM: 614241) PREDICTED: lysocardiolipin (376 aa)
initn: 188 init1: 94 opt: 151 Z-score: 192.1 bits: 44.2 E(85289): 0.00059
Smith-Waterman score: 259; 24.9% identity (52.9% similar) in 350 aa overlap (35-366:17-336)
10 20 30 40 50 60
pF1KSD LEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQP----LRVLDSKRFWYIEGI
:.. ...:.: . : : : . .
XP_016 MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWINNRL
10 20 30 40
70 80 90 100 110 120
pF1KSD MYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLV
. :: :: . : :. :. . : ...:...::.. : : ::. . .
XP_016 VATWLTLPVALLETMFGVKVIITGDAF--VPGERSVIIMNHRTRMDWMFLWNCLMRYSYL
50 60 70 80 90 100
130 140 150 160 170
pF1KSD VAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLEN--NYRS--RDR
. . : . .:: . . . .::. :...:. :.:.:. .: ..
XP_016 RLEKICLKASLKGVPGFGWAMQAAAYIFIH--RKWKDD-----KSHFEDMIDYFCDIHEP
110 120 130 140 150
180 190 200 210 220 230
pF1KSD KWIVLFPEGGFLRKRRET-SQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQKNGSPA
...:::: : . .. :.:::.::.: : ::. . .... : ..:
XP_016 LQLLIFPEGTDLTENSKSRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRL----REG---
160 170 180 190 200 210
240 250 260 270 280 290
pF1KSD GGDAKELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPIKDVPLE
:.::. . : :.:::. : . . . : : : : . .:: .:
XP_016 ----KNLDA-------VHDITVAYPHNIPQSEKHLLQG-DFPREIHFHVHRYPIDTLPTS
220 230 240 250
300 310 320 330 340
pF1KSD TDDLTTWLYQRFVEKEDLLSHFYE-------TG--AFPPSKGHKEAVSREMTLSNLWIFL
.:: : ..:. :::. : ::. :: ..:: :.. ... .. :: :. :
XP_016 KEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKSELRVLVVKL-LSILYWTL
260 270 280 290 300 310
350 360 370
pF1KSD IQSFAFLSGYMWYNIIQYFYHCLF
.. : :. :.......
XP_016 FSPAMCLLIYL-YSLVKWYFIITIVIFVLQERIFGGLEIIELACYRLLHKQPHLNSKKNE
320 330 340 350 360 370
370 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:39:10 2016 done: Thu Nov 3 00:39:11 2016
Total Scan time: 5.640 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]