Result of FASTA (omim) for
pF1KSDA0245
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0245, 515 aa
1>>>pF1KSDA0245 515 - 515 aa - 515 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6422+/-0.000402; mu= 22.1718+/- 0.025
mean_var=64.6838+/-13.101, 0's: 0 Z-trim(110.7): 62 B-trim: 1107 in 1/53
Lambda= 0.159469
statistics sampled from 18993 (19059) to 18993 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.582), E-opt: 0.2 (0.223), width: 16
Scan time: 7.840
The best scores are: opt bits E(85289)
XP_011521736 (OMIM: 605641) PREDICTED: Y+L amino a ( 515) 3394 790.1 0
XP_011521735 (OMIM: 605641) PREDICTED: Y+L amino a ( 515) 3394 790.1 0
NP_001070253 (OMIM: 605641) Y+L amino acid transpo ( 515) 3394 790.1 0
NP_003974 (OMIM: 605641) Y+L amino acid transporte ( 515) 3394 790.1 0
XP_011521740 (OMIM: 605641) PREDICTED: Y+L amino a ( 515) 3394 790.1 0
XP_006720365 (OMIM: 222700,603593) PREDICTED: Y+L ( 511) 2522 589.5 8e-168
NP_001119577 (OMIM: 222700,603593) Y+L amino acid ( 511) 2522 589.5 8e-168
XP_011535600 (OMIM: 222700,603593) PREDICTED: Y+L ( 511) 2522 589.5 8e-168
NP_001119578 (OMIM: 222700,603593) Y+L amino acid ( 511) 2522 589.5 8e-168
XP_011535601 (OMIM: 222700,603593) PREDICTED: Y+L ( 511) 2522 589.5 8e-168
XP_016879340 (OMIM: 605641) PREDICTED: Y+L amino a ( 382) 2245 525.6 9.9e-149
XP_011521741 (OMIM: 605641) PREDICTED: Y+L amino a ( 307) 2036 477.5 2.5e-134
NP_036376 (OMIM: 604235) large neutral amino acids ( 535) 1665 392.3 1.9e-108
NP_003477 (OMIM: 600182) large neutral amino acids ( 507) 1621 382.2 2e-105
XP_016879224 (OMIM: 600182) PREDICTED: large neutr ( 509) 1621 382.2 2e-105
NP_062823 (OMIM: 607959) asc-type amino acid trans ( 523) 1544 364.5 4.4e-100
NP_055146 (OMIM: 607933) cystine/glutamate transpo ( 501) 1509 356.4 1.1e-97
XP_011530104 (OMIM: 607933) PREDICTED: cystine/glu ( 506) 1494 353.0 1.3e-96
NP_001119807 (OMIM: 220100,604144) B(0,+)-type ami ( 487) 1365 323.3 1e-87
NP_001229965 (OMIM: 220100,604144) B(0,+)-type ami ( 487) 1365 323.3 1e-87
XP_011524704 (OMIM: 220100,604144) PREDICTED: B(0, ( 487) 1365 323.3 1e-87
NP_055085 (OMIM: 220100,604144) B(0,+)-type amino ( 487) 1365 323.3 1e-87
XP_006723347 (OMIM: 607959) PREDICTED: asc-type am ( 444) 1102 262.7 1.6e-69
XP_016881719 (OMIM: 220100,604144) PREDICTED: B(0, ( 399) 1092 260.4 7.3e-69
NP_001253965 (OMIM: 604235) large neutral amino ac ( 430) 1086 259.0 2e-68
XP_016879226 (OMIM: 600182) PREDICTED: large neutr ( 332) 1061 253.2 8.9e-67
XP_006721349 (OMIM: 600182) PREDICTED: large neutr ( 352) 1061 253.2 9.3e-67
XP_011525421 (OMIM: 607959) PREDICTED: asc-type am ( 660) 968 232.0 4.1e-60
NP_877392 (OMIM: 604235) large neutral amino acids ( 332) 952 228.1 3.2e-59
XP_016879225 (OMIM: 600182) PREDICTED: large neutr ( 467) 940 225.5 2.8e-58
NP_001253966 (OMIM: 604235) large neutral amino ac ( 311) 809 195.2 2.4e-49
XP_006723055 (OMIM: 220100,604144) PREDICTED: B(0, ( 260) 654 159.4 1.1e-38
XP_011525422 (OMIM: 607959) PREDICTED: asc-type am ( 633) 451 113.1 2.5e-24
NP_004164 (OMIM: 603752) cationic amino acid trans ( 635) 193 53.7 1.9e-06
XP_005266564 (OMIM: 104615) PREDICTED: high affini ( 629) 192 53.5 2.2e-06
NP_003036 (OMIM: 104615) high affinity cationic am ( 629) 192 53.5 2.2e-06
XP_016876205 (OMIM: 104615) PREDICTED: high affini ( 629) 192 53.5 2.2e-06
XP_016876203 (OMIM: 104615) PREDICTED: high affini ( 643) 192 53.5 2.2e-06
XP_016876202 (OMIM: 104615) PREDICTED: high affini ( 643) 192 53.5 2.2e-06
XP_016876204 (OMIM: 104615) PREDICTED: high affini ( 643) 192 53.5 2.2e-06
XP_016869236 (OMIM: 601872) PREDICTED: cationic am ( 657) 184 51.7 8.1e-06
NP_001008539 (OMIM: 601872) cationic amino acid tr ( 658) 184 51.7 8.1e-06
XP_005273667 (OMIM: 601872) PREDICTED: cationic am ( 658) 184 51.7 8.1e-06
XP_005273668 (OMIM: 601872) PREDICTED: cationic am ( 658) 184 51.7 8.1e-06
XP_005273669 (OMIM: 601872) PREDICTED: cationic am ( 658) 184 51.7 8.1e-06
XP_016869235 (OMIM: 601872) PREDICTED: cationic am ( 658) 184 51.7 8.1e-06
NP_003037 (OMIM: 601872) cationic amino acid trans ( 697) 184 51.7 8.4e-06
NP_001158243 (OMIM: 601872) cationic amino acid tr ( 698) 184 51.7 8.5e-06
NP_066000 (OMIM: 615720,615725) probable cationic ( 771) 177 50.1 2.8e-05
NP_001041629 (OMIM: 300443) cationic amino acid tr ( 619) 174 49.3 3.8e-05
>>XP_011521736 (OMIM: 605641) PREDICTED: Y+L amino acid (515 aa)
initn: 3394 init1: 3394 opt: 3394 Z-score: 4218.1 bits: 790.1 E(85289): 0
Smith-Waterman score: 3394; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515)
10 20 30 40 50 60
pF1KSD MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD SGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD YSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD IERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFI
430 440 450 460 470 480
490 500 510
pF1KSD RNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
:::::::::::::::::::::::::::::::::::
XP_011 RNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
490 500 510
>>XP_011521735 (OMIM: 605641) PREDICTED: Y+L amino acid (515 aa)
initn: 3394 init1: 3394 opt: 3394 Z-score: 4218.1 bits: 790.1 E(85289): 0
Smith-Waterman score: 3394; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515)
10 20 30 40 50 60
pF1KSD MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD SGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD YSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD IERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFI
430 440 450 460 470 480
490 500 510
pF1KSD RNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
:::::::::::::::::::::::::::::::::::
XP_011 RNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
490 500 510
>>NP_001070253 (OMIM: 605641) Y+L amino acid transporter (515 aa)
initn: 3394 init1: 3394 opt: 3394 Z-score: 4218.1 bits: 790.1 E(85289): 0
Smith-Waterman score: 3394; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515)
10 20 30 40 50 60
pF1KSD MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD SGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD YSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD IERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFI
430 440 450 460 470 480
490 500 510
pF1KSD RNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
:::::::::::::::::::::::::::::::::::
NP_001 RNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
490 500 510
>>NP_003974 (OMIM: 605641) Y+L amino acid transporter 2 (515 aa)
initn: 3394 init1: 3394 opt: 3394 Z-score: 4218.1 bits: 790.1 E(85289): 0
Smith-Waterman score: 3394; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515)
10 20 30 40 50 60
pF1KSD MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD SGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD YSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD IERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 IERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFI
430 440 450 460 470 480
490 500 510
pF1KSD RNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
:::::::::::::::::::::::::::::::::::
NP_003 RNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
490 500 510
>>XP_011521740 (OMIM: 605641) PREDICTED: Y+L amino acid (515 aa)
initn: 3394 init1: 3394 opt: 3394 Z-score: 4218.1 bits: 790.1 E(85289): 0
Smith-Waterman score: 3394; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515)
10 20 30 40 50 60
pF1KSD MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD SGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD YSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD IERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFI
430 440 450 460 470 480
490 500 510
pF1KSD RNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
:::::::::::::::::::::::::::::::::::
XP_011 RNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
490 500 510
>>XP_006720365 (OMIM: 222700,603593) PREDICTED: Y+L amin (511 aa)
initn: 2530 init1: 2503 opt: 2522 Z-score: 3133.9 bits: 589.5 E(85289): 8e-168
Smith-Waterman score: 2522; 73.6% identity (89.2% similar) in 500 aa overlap (20-515:11-507)
10 20 30 40 50
pF1KSD MEAREPGRPTPTYHLVPNTSQSQVEE----DVSSPPQRSSETMQLKKEISLLNGVSLVVG
:: .:: : .:: . : ..::::::::::: :.::
XP_006 MVDSTEYEVASQPEVETSPLGDGASP---GPEQVKLKKEISLLNGVCLIVG
10 20 30 40
60 70 80 90 100 110
pF1KSD NMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYIL
:::::::::::::::...::.:.::..::.:::::: :::::::::::: ::::::::::
XP_006 NMIGSGIFVSPKGVLIYSASFGLSLVIWAVGGLFSVFGALCYAELGTTIKKSGASYAYIL
50 60 70 80 90 100
120 130 140 150 160 170
pF1KSD EAFGGFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICL
::::::.::::::.:::..:::.:::::::::::..:: :::: :: : ::::::::::
XP_006 EAFGGFLAFIRLWTSLLIIEPTSQAIIAITFANYMVQPLFPSCFAPYAASRLLAAACICL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KSD LTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNL
:::.::::::::: ::: ::::::.::::.:: :.:.: :: : ::...:::::. .:..
XP_006 LTFINCAYVKWGTLVQDIFTYAKVLALIAVIVAGIVRLGQGASTHFENSFEGSSFAVGDI
170 180 190 200 210 220
240 250 260 270 280 290
pF1KSD SLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIS
.:::::::::::::::::.::::::::::::::.:::::::::.:::::::::::::..
XP_006 ALALYSALFSYSGWDTLNYVTEEIKNPERNLPLSIGISMPIVTIIYILTNVAYYTVLDMR
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD DVLSSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLL
:.:.::::::::::: ::.:.: ::..::::::::::::: :.::::::::::::::: .
XP_006 DILASDAVAVTFADQIFGIFNWIIPLSVALSCFGGLNASIVAASRLFFVGSREGHLPDAI
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD SMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEP
:::.:::::.:.:::: :::::: :::.::::::.:::::::::::.:::::::::::
XP_006 CMIHVERFTPVPSLLFNGIMALIYLCVEDIFQLINYYSFSYWFFVGLSIVGQLYLRWKEP
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD KRPRPLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRR
::::::::::::::::.:..::: :::..:::::::::.:::::.::::. . .:: .:
XP_006 DRPRPLKLSVFFPIVFCLCTIFLVAVPLYSDTINSLIGIAIALSGLPFYFLIIRVPEHKR
410 420 430 440 450 460
480 490 500 510
pF1KSD PLFIRNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
::..: .... :: : ::. : .:.:. . . .. :
XP_006 PLYLRRIVGSATRYLQVLCMSVAAEMDLEDGGEMPKQRDPKSN
470 480 490 500 510
>>NP_001119577 (OMIM: 222700,603593) Y+L amino acid tran (511 aa)
initn: 2530 init1: 2503 opt: 2522 Z-score: 3133.9 bits: 589.5 E(85289): 8e-168
Smith-Waterman score: 2522; 73.6% identity (89.2% similar) in 500 aa overlap (20-515:11-507)
10 20 30 40 50
pF1KSD MEAREPGRPTPTYHLVPNTSQSQVEE----DVSSPPQRSSETMQLKKEISLLNGVSLVVG
:: .:: : .:: . : ..::::::::::: :.::
NP_001 MVDSTEYEVASQPEVETSPLGDGASP---GPEQVKLKKEISLLNGVCLIVG
10 20 30 40
60 70 80 90 100 110
pF1KSD NMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYIL
:::::::::::::::...::.:.::..::.:::::: :::::::::::: ::::::::::
NP_001 NMIGSGIFVSPKGVLIYSASFGLSLVIWAVGGLFSVFGALCYAELGTTIKKSGASYAYIL
50 60 70 80 90 100
120 130 140 150 160 170
pF1KSD EAFGGFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICL
::::::.::::::.:::..:::.:::::::::::..:: :::: :: : ::::::::::
NP_001 EAFGGFLAFIRLWTSLLIIEPTSQAIIAITFANYMVQPLFPSCFAPYAASRLLAAACICL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KSD LTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNL
:::.::::::::: ::: ::::::.::::.:: :.:.: :: : ::...:::::. .:..
NP_001 LTFINCAYVKWGTLVQDIFTYAKVLALIAVIVAGIVRLGQGASTHFENSFEGSSFAVGDI
170 180 190 200 210 220
240 250 260 270 280 290
pF1KSD SLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIS
.:::::::::::::::::.::::::::::::::.:::::::::.:::::::::::::..
NP_001 ALALYSALFSYSGWDTLNYVTEEIKNPERNLPLSIGISMPIVTIIYILTNVAYYTVLDMR
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD DVLSSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLL
:.:.::::::::::: ::.:.: ::..::::::::::::: :.::::::::::::::: .
NP_001 DILASDAVAVTFADQIFGIFNWIIPLSVALSCFGGLNASIVAASRLFFVGSREGHLPDAI
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD SMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEP
:::.:::::.:.:::: :::::: :::.::::::.:::::::::::.:::::::::::
NP_001 CMIHVERFTPVPSLLFNGIMALIYLCVEDIFQLINYYSFSYWFFVGLSIVGQLYLRWKEP
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD KRPRPLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRR
::::::::::::::::.:..::: :::..:::::::::.:::::.::::. . .:: .:
NP_001 DRPRPLKLSVFFPIVFCLCTIFLVAVPLYSDTINSLIGIAIALSGLPFYFLIIRVPEHKR
410 420 430 440 450 460
480 490 500 510
pF1KSD PLFIRNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
::..: .... :: : ::. : .:.:. . . .. :
NP_001 PLYLRRIVGSATRYLQVLCMSVAAEMDLEDGGEMPKQRDPKSN
470 480 490 500 510
>>XP_011535600 (OMIM: 222700,603593) PREDICTED: Y+L amin (511 aa)
initn: 2530 init1: 2503 opt: 2522 Z-score: 3133.9 bits: 589.5 E(85289): 8e-168
Smith-Waterman score: 2522; 73.6% identity (89.2% similar) in 500 aa overlap (20-515:11-507)
10 20 30 40 50
pF1KSD MEAREPGRPTPTYHLVPNTSQSQVEE----DVSSPPQRSSETMQLKKEISLLNGVSLVVG
:: .:: : .:: . : ..::::::::::: :.::
XP_011 MVDSTEYEVASQPEVETSPLGDGASP---GPEQVKLKKEISLLNGVCLIVG
10 20 30 40
60 70 80 90 100 110
pF1KSD NMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYIL
:::::::::::::::...::.:.::..::.:::::: :::::::::::: ::::::::::
XP_011 NMIGSGIFVSPKGVLIYSASFGLSLVIWAVGGLFSVFGALCYAELGTTIKKSGASYAYIL
50 60 70 80 90 100
120 130 140 150 160 170
pF1KSD EAFGGFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICL
::::::.::::::.:::..:::.:::::::::::..:: :::: :: : ::::::::::
XP_011 EAFGGFLAFIRLWTSLLIIEPTSQAIIAITFANYMVQPLFPSCFAPYAASRLLAAACICL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KSD LTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNL
:::.::::::::: ::: ::::::.::::.:: :.:.: :: : ::...:::::. .:..
XP_011 LTFINCAYVKWGTLVQDIFTYAKVLALIAVIVAGIVRLGQGASTHFENSFEGSSFAVGDI
170 180 190 200 210 220
240 250 260 270 280 290
pF1KSD SLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIS
.:::::::::::::::::.::::::::::::::.:::::::::.:::::::::::::..
XP_011 ALALYSALFSYSGWDTLNYVTEEIKNPERNLPLSIGISMPIVTIIYILTNVAYYTVLDMR
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD DVLSSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLL
:.:.::::::::::: ::.:.: ::..::::::::::::: :.::::::::::::::: .
XP_011 DILASDAVAVTFADQIFGIFNWIIPLSVALSCFGGLNASIVAASRLFFVGSREGHLPDAI
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD SMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEP
:::.:::::.:.:::: :::::: :::.::::::.:::::::::::.:::::::::::
XP_011 CMIHVERFTPVPSLLFNGIMALIYLCVEDIFQLINYYSFSYWFFVGLSIVGQLYLRWKEP
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD KRPRPLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRR
::::::::::::::::.:..::: :::..:::::::::.:::::.::::. . .:: .:
XP_011 DRPRPLKLSVFFPIVFCLCTIFLVAVPLYSDTINSLIGIAIALSGLPFYFLIIRVPEHKR
410 420 430 440 450 460
480 490 500 510
pF1KSD PLFIRNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
::..: .... :: : ::. : .:.:. . . .. :
XP_011 PLYLRRIVGSATRYLQVLCMSVAAEMDLEDGGEMPKQRDPKSN
470 480 490 500 510
>>NP_001119578 (OMIM: 222700,603593) Y+L amino acid tran (511 aa)
initn: 2530 init1: 2503 opt: 2522 Z-score: 3133.9 bits: 589.5 E(85289): 8e-168
Smith-Waterman score: 2522; 73.6% identity (89.2% similar) in 500 aa overlap (20-515:11-507)
10 20 30 40 50
pF1KSD MEAREPGRPTPTYHLVPNTSQSQVEE----DVSSPPQRSSETMQLKKEISLLNGVSLVVG
:: .:: : .:: . : ..::::::::::: :.::
NP_001 MVDSTEYEVASQPEVETSPLGDGASP---GPEQVKLKKEISLLNGVCLIVG
10 20 30 40
60 70 80 90 100 110
pF1KSD NMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYIL
:::::::::::::::...::.:.::..::.:::::: :::::::::::: ::::::::::
NP_001 NMIGSGIFVSPKGVLIYSASFGLSLVIWAVGGLFSVFGALCYAELGTTIKKSGASYAYIL
50 60 70 80 90 100
120 130 140 150 160 170
pF1KSD EAFGGFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICL
::::::.::::::.:::..:::.:::::::::::..:: :::: :: : ::::::::::
NP_001 EAFGGFLAFIRLWTSLLIIEPTSQAIIAITFANYMVQPLFPSCFAPYAASRLLAAACICL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KSD LTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNL
:::.::::::::: ::: ::::::.::::.:: :.:.: :: : ::...:::::. .:..
NP_001 LTFINCAYVKWGTLVQDIFTYAKVLALIAVIVAGIVRLGQGASTHFENSFEGSSFAVGDI
170 180 190 200 210 220
240 250 260 270 280 290
pF1KSD SLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIS
.:::::::::::::::::.::::::::::::::.:::::::::.:::::::::::::..
NP_001 ALALYSALFSYSGWDTLNYVTEEIKNPERNLPLSIGISMPIVTIIYILTNVAYYTVLDMR
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD DVLSSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLL
:.:.::::::::::: ::.:.: ::..::::::::::::: :.::::::::::::::: .
NP_001 DILASDAVAVTFADQIFGIFNWIIPLSVALSCFGGLNASIVAASRLFFVGSREGHLPDAI
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD SMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEP
:::.:::::.:.:::: :::::: :::.::::::.:::::::::::.:::::::::::
NP_001 CMIHVERFTPVPSLLFNGIMALIYLCVEDIFQLINYYSFSYWFFVGLSIVGQLYLRWKEP
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD KRPRPLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRR
::::::::::::::::.:..::: :::..:::::::::.:::::.::::. . .:: .:
NP_001 DRPRPLKLSVFFPIVFCLCTIFLVAVPLYSDTINSLIGIAIALSGLPFYFLIIRVPEHKR
410 420 430 440 450 460
480 490 500 510
pF1KSD PLFIRNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
::..: .... :: : ::. : .:.:. . . .. :
NP_001 PLYLRRIVGSATRYLQVLCMSVAAEMDLEDGGEMPKQRDPKSN
470 480 490 500 510
>>XP_011535601 (OMIM: 222700,603593) PREDICTED: Y+L amin (511 aa)
initn: 2530 init1: 2503 opt: 2522 Z-score: 3133.9 bits: 589.5 E(85289): 8e-168
Smith-Waterman score: 2522; 73.6% identity (89.2% similar) in 500 aa overlap (20-515:11-507)
10 20 30 40 50
pF1KSD MEAREPGRPTPTYHLVPNTSQSQVEE----DVSSPPQRSSETMQLKKEISLLNGVSLVVG
:: .:: : .:: . : ..::::::::::: :.::
XP_011 MVDSTEYEVASQPEVETSPLGDGASP---GPEQVKLKKEISLLNGVCLIVG
10 20 30 40
60 70 80 90 100 110
pF1KSD NMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYIL
:::::::::::::::...::.:.::..::.:::::: :::::::::::: ::::::::::
XP_011 NMIGSGIFVSPKGVLIYSASFGLSLVIWAVGGLFSVFGALCYAELGTTIKKSGASYAYIL
50 60 70 80 90 100
120 130 140 150 160 170
pF1KSD EAFGGFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICL
::::::.::::::.:::..:::.:::::::::::..:: :::: :: : ::::::::::
XP_011 EAFGGFLAFIRLWTSLLIIEPTSQAIIAITFANYMVQPLFPSCFAPYAASRLLAAACICL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KSD LTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNL
:::.::::::::: ::: ::::::.::::.:: :.:.: :: : ::...:::::. .:..
XP_011 LTFINCAYVKWGTLVQDIFTYAKVLALIAVIVAGIVRLGQGASTHFENSFEGSSFAVGDI
170 180 190 200 210 220
240 250 260 270 280 290
pF1KSD SLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIS
.:::::::::::::::::.::::::::::::::.:::::::::.:::::::::::::..
XP_011 ALALYSALFSYSGWDTLNYVTEEIKNPERNLPLSIGISMPIVTIIYILTNVAYYTVLDMR
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD DVLSSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLL
:.:.::::::::::: ::.:.: ::..::::::::::::: :.::::::::::::::: .
XP_011 DILASDAVAVTFADQIFGIFNWIIPLSVALSCFGGLNASIVAASRLFFVGSREGHLPDAI
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD SMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEP
:::.:::::.:.:::: :::::: :::.::::::.:::::::::::.:::::::::::
XP_011 CMIHVERFTPVPSLLFNGIMALIYLCVEDIFQLINYYSFSYWFFVGLSIVGQLYLRWKEP
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD KRPRPLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRR
::::::::::::::::.:..::: :::..:::::::::.:::::.::::. . .:: .:
XP_011 DRPRPLKLSVFFPIVFCLCTIFLVAVPLYSDTINSLIGIAIALSGLPFYFLIIRVPEHKR
410 420 430 440 450 460
480 490 500 510
pF1KSD PLFIRNVLAAITRGTQQLCFCVLTELDVAEEKKDERKTD
::..: .... :: : ::. : .:.:. . . .. :
XP_011 PLYLRRIVGSATRYLQVLCMSVAAEMDLEDGGEMPKQRDPKSN
470 480 490 500 510
515 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:53:28 2016 done: Thu Nov 3 00:53:29 2016
Total Scan time: 7.840 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]