Result of FASTA (ccds) for
pF1KSDA0544
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0544, 552 aa
1>>>pF1KSDA0544 552 - 552 aa - 552 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8141+/-0.000907; mu= 8.2572+/- 0.055
mean_var=175.1209+/-36.181, 0's: 0 Z-trim(111.3): 43 B-trim: 0 in 0/53
Lambda= 0.096918
statistics sampled from 12233 (12262) to 12233 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.377), width: 16
Scan time: 3.370
The best scores are: opt bits E(32554)
CCDS45402.1 MGRN1 gene_id:23295|Hs108|chr16 ( 552) 3718 532.3 5.9e-151
CCDS42115.1 MGRN1 gene_id:23295|Hs108|chr16 ( 576) 3627 519.6 4.1e-147
CCDS45401.2 MGRN1 gene_id:23295|Hs108|chr16 ( 530) 2462 356.6 4.2e-98
CCDS59256.1 MGRN1 gene_id:23295|Hs108|chr16 ( 554) 2442 353.9 3e-97
CCDS82208.1 RNF157 gene_id:114804|Hs108|chr17 ( 657) 1752 257.4 3.8e-68
CCDS32740.1 RNF157 gene_id:114804|Hs108|chr17 ( 679) 1752 257.4 3.9e-68
>>CCDS45402.1 MGRN1 gene_id:23295|Hs108|chr16 (552 aa)
initn: 3718 init1: 3718 opt: 3718 Z-score: 2823.7 bits: 532.3 E(32554): 5.9e-151
Smith-Waterman score: 3718; 100.0% identity (100.0% similar) in 552 aa overlap (1-552:1-552)
10 20 30 40 50 60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
490 500 510 520 530 540
550
pF1KSD LGPDSCSVGIDE
::::::::::::
CCDS45 LGPDSCSVGIDE
550
>>CCDS42115.1 MGRN1 gene_id:23295|Hs108|chr16 (576 aa)
initn: 3627 init1: 3627 opt: 3627 Z-score: 2754.6 bits: 519.6 E(32554): 4.1e-147
Smith-Waterman score: 3627; 100.0% identity (100.0% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPG
490 500 510 520 530 540
550
pF1KSD LGPDSCSVGIDE
CCDS42 RPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTPL
550 560 570
>>CCDS45401.2 MGRN1 gene_id:23295|Hs108|chr16 (530 aa)
initn: 2401 init1: 2401 opt: 2462 Z-score: 1874.8 bits: 356.6 E(32554): 4.2e-98
Smith-Waterman score: 3509; 96.0% identity (96.0% similar) in 552 aa overlap (1-552:1-530)
10 20 30 40 50 60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS-----
310 320 330 340 350
370 380 390 400 410 420
pF1KSD SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
:::::::::::::::::::::::::::::::::::::::::::
CCDS45 -----------------NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
360 370 380 390
430 440 450 460 470 480
pF1KSD DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
400 410 420 430 440 450
490 500 510 520 530 540
pF1KSD GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
460 470 480 490 500 510
550
pF1KSD LGPDSCSVGIDE
::::::::::::
CCDS45 LGPDSCSVGIDE
520 530
>>CCDS59256.1 MGRN1 gene_id:23295|Hs108|chr16 (554 aa)
initn: 2428 init1: 2401 opt: 2442 Z-score: 1859.4 bits: 353.9 E(32554): 3e-97
Smith-Waterman score: 3418; 95.9% identity (95.9% similar) in 539 aa overlap (1-539:1-517)
10 20 30 40 50 60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS-----
310 320 330 340 350
370 380 390 400 410 420
pF1KSD SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
:::::::::::::::::::::::::::::::::::::::::::
CCDS59 -----------------NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
360 370 380 390
430 440 450 460 470 480
pF1KSD DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
400 410 420 430 440 450
490 500 510 520 530 540
pF1KSD GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPG
460 470 480 490 500 510
550
pF1KSD LGPDSCSVGIDE
CCDS59 RPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTPL
520 530 540 550
>>CCDS82208.1 RNF157 gene_id:114804|Hs108|chr17 (657 aa)
initn: 1797 init1: 997 opt: 1752 Z-score: 1337.0 bits: 257.4 E(32554): 3.8e-68
Smith-Waterman score: 1868; 57.5% identity (75.9% similar) in 539 aa overlap (1-526:1-508)
10 20 30 40 50 60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
::.. ::. ::::..:: .::.::::::::.::::::.:::::::. :::::::::: ::
CCDS82 MGALTSRQHAGVEEVDIPSNSVYRYPPKSGSYFASHFIMGGEKFDSTHPEGYLFGENSDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
::::.::: :::..: :.:::::::::::::::.::::. ... :: :...: .: :..
CCDS82 NFLGNRPVVFPYAAPPPQEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
:::::.::::::::: ::.::: :: : : ::. :::::::.::::: ::: ::: .:
CCDS82 EFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHTVDP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
::: ..::.::::: :.:.:..::::::: : :: ::::..:::: ::.: :::::::
CCDS82 SEWAEEELGFDLDREVYPLVVHAVVDEGD--EYFGHCHVLLGTFEKHTDGTFCVKPLKQK
190 200 210 220 230
250 260 270 280 290
pF1KSD QIVDRVSYLLQEIYGIENK-NNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
:.:: :::::::::::::: :.:..: ..:: :::: ::::::::.::::::::::::::
CCDS82 QVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCLC
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK
..:::::::::::::::::::::::::::.::: : :::.::.:... : :
CCDS82 NTCADTLRYQANNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIIS-SQTSD-------
300 310 320 330 340 350
360 370 380 390 400 410
pF1KSD KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI
:. :: .:...::::: .:::::::: . :::.: . . ::.
CCDS82 -SEEHP------------SSENIPPGYEVVSLLEALNGPLTPSPAVPPLHVLGDGHLSGM
360 370 380 390
420 430 440 450 460 470
pF1KSD -----SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEE-DEEKLSED
::: .. .:.. ::: : : .:. ... . :: .::: ::.. ::.
CCDS82 LPSYGSDGHLPPVRTISPLDRLSDSSSQ-GLKLKKSLSKSTSQNSSVLHEEEDEHSCSES
400 410 420 430 440 450
480 490 500 510 520
pF1KSD ---VDAPPPLGGAELALRESSSPESFITEEVDESSS---PQQGTRAASIENVLQDSSPEH
.. : . .:. . . .::: :.. ::: :.. .. . ... ::::
CCDS82 ETQLSQRPSV--QHLGEECGVTPES---ENLTLSSSGAIDQSSCTGTPLSSTI--SSPEG
460 470 480 490 500
530 540 550
pF1KSD CGRGPPADIYLPALGPDSCSVGIDE
CCDS82 PASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGEALSSPQPASRAPSEEGEGND
510 520 530 540 550 560
>>CCDS32740.1 RNF157 gene_id:114804|Hs108|chr17 (679 aa)
initn: 1823 init1: 997 opt: 1752 Z-score: 1336.8 bits: 257.4 E(32554): 3.9e-68
Smith-Waterman score: 1868; 57.5% identity (75.9% similar) in 539 aa overlap (1-526:1-508)
10 20 30 40 50 60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
::.. ::. ::::..:: .::.::::::::.::::::.:::::::. :::::::::: ::
CCDS32 MGALTSRQHAGVEEVDIPSNSVYRYPPKSGSYFASHFIMGGEKFDSTHPEGYLFGENSDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
::::.::: :::..: :.:::::::::::::::.::::. ... :: :...: .: :..
CCDS32 NFLGNRPVVFPYAAPPPQEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
:::::.::::::::: ::.::: :: : : ::. :::::::.::::: ::: ::: .:
CCDS32 EFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHTVDP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
::: ..::.::::: :.:.:..::::::: : :: ::::..:::: ::.: :::::::
CCDS32 SEWAEEELGFDLDREVYPLVVHAVVDEGD--EYFGHCHVLLGTFEKHTDGTFCVKPLKQK
190 200 210 220 230
250 260 270 280 290
pF1KSD QIVDRVSYLLQEIYGIENK-NNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
:.:: :::::::::::::: :.:..: ..:: :::: ::::::::.::::::::::::::
CCDS32 QVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCLC
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK
..:::::::::::::::::::::::::::.::: : :::.::.:... : :
CCDS32 NTCADTLRYQANNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIIS-SQTSD-------
300 310 320 330 340 350
360 370 380 390 400 410
pF1KSD KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI
:. :: .:...::::: .:::::::: . :::.: . . ::.
CCDS32 -SEEHP------------SSENIPPGYEVVSLLEALNGPLTPSPAVPPLHVLGDGHLSGM
360 370 380 390
420 430 440 450 460 470
pF1KSD -----SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEE-DEEKLSED
::: .. .:.. ::: : : .:. ... . :: .::: ::.. ::.
CCDS32 LPSYGSDGHLPPVRTISPLDRLSDSSSQ-GLKLKKSLSKSTSQNSSVLHEEEDEHSCSES
400 410 420 430 440 450
480 490 500 510 520
pF1KSD ---VDAPPPLGGAELALRESSSPESFITEEVDESSS---PQQGTRAASIENVLQDSSPEH
.. : . .:. . . .::: :.. ::: :.. .. . ... ::::
CCDS32 ETQLSQRPSV--QHLGEECGVTPES---ENLTLSSSGAIDQSSCTGTPLSSTI--SSPEG
460 470 480 490 500
530 540 550
pF1KSD CGRGPPADIYLPALGPDSCSVGIDE
CCDS32 PASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGEALSSPQPASRAPSEEGEGLP
510 520 530 540 550 560
552 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 02:01:17 2016 done: Thu Nov 3 02:01:18 2016
Total Scan time: 3.370 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]