Result of FASTA (ccds) for
pF1KSDA0642
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0642, 1320 aa
1>>>pF1KSDA0642 1320 - 1320 aa - 1320 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.0429+/-0.00117; mu= -9.8761+/- 0.070
mean_var=595.4297+/-122.630, 0's: 0 Z-trim(115.4): 130 B-trim: 105 in 1/54
Lambda= 0.052560
statistics sampled from 15845 (15951) to 15845 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.49), width: 16
Scan time: 6.070
The best scores are: opt bits E(32554)
CCDS46542.1 GIGYF2 gene_id:26058|Hs108|chr2 (1320) 8875 689.2 1.9e-197
CCDS33401.1 GIGYF2 gene_id:26058|Hs108|chr2 (1299) 7501 585.0 4.3e-166
CCDS46543.1 GIGYF2 gene_id:26058|Hs108|chr2 (1293) 7436 580.1 1.3e-164
CCDS34708.1 GIGYF1 gene_id:64599|Hs108|chr7 (1035) 870 82.1 8.6e-15
>>CCDS46542.1 GIGYF2 gene_id:26058|Hs108|chr2 (1320 aa)
initn: 8875 init1: 8875 opt: 8875 Z-score: 3658.3 bits: 689.2 E(32554): 1.9e-197
Smith-Waterman score: 8875; 100.0% identity (100.0% similar) in 1320 aa overlap (1-1320:1-1320)
10 20 30 40 50 60
pF1KSD MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD NGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD GWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD GSHNEEAKEPDKTNKKEGEKTDRVGVASEETPQTSSSSARPGTPSDHQSQEASQFERKDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GSHNEEAKEPDKTNKKEGEKTDRVGVASEETPQTSSSSARPGTPSDHQSQEASQFERKDE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNPS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD PTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQEH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD RAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD LGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD LAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTAS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD QPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD ELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEA
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD LRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD EERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQ
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD SQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGTT
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD KSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWAS
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD DLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEEE
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KSD KLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLG
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KSD DTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHSTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHSTL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KSD HSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDDY
1270 1280 1290 1300 1310 1320
>>CCDS33401.1 GIGYF2 gene_id:26058|Hs108|chr2 (1299 aa)
initn: 7383 init1: 6178 opt: 7501 Z-score: 3095.3 bits: 585.0 E(32554): 4.3e-166
Smith-Waterman score: 8645; 98.3% identity (98.3% similar) in 1321 aa overlap (1-1320:1-1299)
10 20 30 40 50 60
pF1KSD MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVG--
130 140 150 160 170
190 200 210 220 230 240
pF1KSD NGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
::::::::::::::::::::::::::::::::::::::::
CCDS33 --------------------RPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
180 190 200 210
250 260 270 280 290 300
pF1KSD GWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
280 290 300 310 320 330
370 380 390 400 410
pF1KSD GSHNEEAKEPDKTNKKEGEKTDRVGV-ASEETPQTSSSSARPGTPSDHQSQEASQFERKD
:::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
CCDS33 GSHNEEAKEPDKTNKKEGEKTDRVGVEASEETPQTSSSSARPGTPSDHQSQEASQFERKD
340 350 360 370 380 390
420 430 440 450 460 470
pF1KSD EPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNP
400 410 420 430 440 450
480 490 500 510 520 530
pF1KSD SPTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SPTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQE
460 470 480 490 500 510
540 550 560 570 580 590
pF1KSD HRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQ
520 530 540 550 560 570
600 610 620 630 640 650
pF1KSD PLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQ
580 590 600 610 620 630
660 670 680 690 700 710
pF1KSD VLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTA
640 650 660 670 680 690
720 730 740 750 760 770
pF1KSD SQPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SQPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQ
700 710 720 730 740 750
780 790 800 810 820 830
pF1KSD EELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEE
760 770 780 790 800 810
840 850 860 870 880 890
pF1KSD ALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHE
820 830 840 850 860 870
900 910 920 930 940 950
pF1KSD EEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTAC
880 890 900 910 920 930
960 970 980 990 1000 1010
pF1KSD QSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGT
940 950 960 970 980 990
1020 1030 1040 1050 1060 1070
pF1KSD TKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWA
1000 1010 1020 1030 1040 1050
1080 1090 1100 1110 1120 1130
pF1KSD SDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEE
1060 1070 1080 1090 1100 1110
1140 1150 1160 1170 1180 1190
pF1KSD EKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYL
1120 1130 1140 1150 1160 1170
1200 1210 1220 1230 1240 1250
pF1KSD GDTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GDTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHST
1180 1190 1200 1210 1220 1230
1260 1270 1280 1290 1300 1310
pF1KSD LHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDD
1240 1250 1260 1270 1280 1290
1320
pF1KSD Y
:
CCDS33 Y
>>CCDS46543.1 GIGYF2 gene_id:26058|Hs108|chr2 (1293 aa)
initn: 7383 init1: 6178 opt: 7436 Z-score: 3068.7 bits: 580.1 E(32554): 1.3e-164
Smith-Waterman score: 8580; 97.8% identity (97.8% similar) in 1321 aa overlap (1-1320:1-1293)
10 20 30 40 50 60
pF1KSD MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVG--
130 140 150 160 170
190 200 210 220 230 240
pF1KSD NGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
::::::::::::::::::::::::::::::::::::::::
CCDS46 --------------------RPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
180 190 200 210
250 260 270 280 290 300
pF1KSD GWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
::::::::::::::::::: :::::::::::::::::::::::::::::::::::
CCDS46 GWRLAGSRRDGERWRPHSP------GWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
280 290 300 310 320 330
370 380 390 400 410
pF1KSD GSHNEEAKEPDKTNKKEGEKTDRVGV-ASEETPQTSSSSARPGTPSDHQSQEASQFERKD
:::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
CCDS46 GSHNEEAKEPDKTNKKEGEKTDRVGVEASEETPQTSSSSARPGTPSDHQSQEASQFERKD
340 350 360 370 380 390
420 430 440 450 460 470
pF1KSD EPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNP
400 410 420 430 440 450
480 490 500 510 520 530
pF1KSD SPTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SPTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQE
460 470 480 490 500 510
540 550 560 570 580 590
pF1KSD HRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQ
520 530 540 550 560 570
600 610 620 630 640 650
pF1KSD PLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQ
580 590 600 610 620 630
660 670 680 690 700 710
pF1KSD VLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTA
640 650 660 670 680 690
720 730 740 750 760 770
pF1KSD SQPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SQPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQ
700 710 720 730 740 750
780 790 800 810 820 830
pF1KSD EELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEE
760 770 780 790 800 810
840 850 860 870 880 890
pF1KSD ALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHE
820 830 840 850 860 870
900 910 920 930 940 950
pF1KSD EEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTAC
880 890 900 910 920 930
960 970 980 990 1000 1010
pF1KSD QSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGT
940 950 960 970 980 990
1020 1030 1040 1050 1060 1070
pF1KSD TKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWA
1000 1010 1020 1030 1040 1050
1080 1090 1100 1110 1120 1130
pF1KSD SDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEE
1060 1070 1080 1090 1100 1110
1140 1150 1160 1170 1180 1190
pF1KSD EKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYL
1120 1130 1140 1150 1160 1170
1200 1210 1220 1230 1240 1250
pF1KSD GDTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GDTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHST
1180 1190 1200 1210 1220 1230
1260 1270 1280 1290 1300 1310
pF1KSD LHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDD
1240 1250 1260 1270 1280 1290
1320
pF1KSD Y
:
CCDS46 Y
>>CCDS34708.1 GIGYF1 gene_id:64599|Hs108|chr7 (1035 aa)
initn: 2361 init1: 713 opt: 870 Z-score: 379.0 bits: 82.1 E(32554): 8.6e-15
Smith-Waterman score: 2973; 42.8% identity (61.8% similar) in 1363 aa overlap (1-1320:1-1035)
10 20 30 40 50 60
pF1KSD MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
::::: ::::::::::::.:::..::: :::.::::::::::::::::::..:.::.:
CCDS34 MAAET--LNFGPEWLRALSGGGSVASPPPSPAMPKYKLADYRYGREEMLALYVKENKVPE
10 20 30 40 50
70 80 90 100 110 120
pF1KSD DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
.: :::: .::.::: :::: :.:::::::::.::::.::::: :.:.: ..:. :::
CCDS34 ELQDKEFAAVLQDEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLAGTSRGR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKK
.:.:.::::::. :::::..: .:.:::. ::..:::::..::.::::: .:.:
CCDS34 GSTRSRGRGRGDSCFYQRSIEEGDGAFGRSP-REIQRSQSWDDRGERRFEKSARRD----
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD NGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
: : .::::: .: ..: ::.::::: .::::. :.:.:
CCDS34 -GARC-----------------GFEEGG---AGPRKEHARSDSENWRSLREEQE-EEEEG
180 190 200 210
250 260 270 280
pF1KSD GWRL-AGSRRDGERWRPHSPDG-PRSAGWREHMERRRRFEFDFR-DR-----DDERG---
.::: :: ::::.::: :::: ::::::::: ::::.::::.: :: .. ::
CCDS34 SWRLGAGPRRDGDRWRSASPDGGPRSAGWREHGERRRKFEFDLRGDRGGCGEEEGRGGGG
220 230 240 250 260 270
290 300 310 320 330 340
pF1KSD ---YRRVRSGSGSIDDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMD
:: :. : ...:.:.::::::.: .:::::::.::::: ::: :::::::::.:
CCDS34 SSHLRRCRAPEG-FEEDKDGLPEWCLDDEDEEMGTFDASGAFLPLKKGPKEPIPEEQELD
280 290 300 310 320 330
350 360 370 380 390 400
pF1KSD FRPVDEGEECSDSEGSHNEEAKEPDKTNKKEGEKTDRVGVASEETPQTSSSSARPGTPSD
:. ..: :: ::: . :: :..... : :..
CCDS34 FQGLEEEEE--PSEGLE-------------------------EEGPEAGGKELTPLPPQE
340 350 360
410 420 430 440 450 460
pF1KSD HQSQEASQFERKDEPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTA
..: : :. .:. : :: .:
CCDS34 EKS----------------------------SSPSPLPTLG---------PLWGTNGDGD
370 380
470 480 490 500 510 520
pF1KSD SPLLILPPPVPNPSPTLRPVETPVVGAPGMGSVSTEP---DDEEGLKHLEQQAEKMVAYL
:: . . .: .. .::.:: . : .:.::::::.:.:::.:: :
CCDS34 ETAEKEPPAAEDD---IRGIQL----SPGVGSSAGPPGDLEDDEGLKHLQQEAEKLVASL
390 400 410 420 430
530 540 550 560 570
pF1KSD QDSALDDERLASKLQ----EHRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWF
:::.:..:.... .: .: : ....:: : : .::.::::::::::::..:::::::
CCDS34 QDSSLEEEQFTAAMQTQGLRHSAAATALPLSHGAARKWFYKDPQGEIQGPFTTQEMAEWF
440 450 460 470 480 490
580 590 600 610 620 630
pF1KSD QAGYFTMSLLVKRACDESFQPLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTA
:::::.:::::::.:::.:::::...::::::::.:::.::: .:..::::: .::::.:
CCDS34 QAGYFSMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLGNMDQERLKKQQELAA
500 510 520 530 540 550
640 650 660 670 680
pF1KSD --LYQ-MQHLQYQQFLIQQQYAQVLAQQQKAALSS----------QQQQQLALLLQQFQT
::: .:: :. :.. ..: : : ..::::.. ::::::. .:::.:.
CCDS34 AALYQQLQHQQFLQLVSSRQLPQC-ALREKAALGDLTPPPPPPPQQQQQQLTAFLQQLQA
560 570 580 590 600 610
690 700 710 720 730 740
pF1KSD LKM-RISDQNIIPSVTRSVSVPDTGSIWELQPTASQPTVWEGGSVWDLPLDTTTPGPALE
:: : .:::..:...::.::::.: .:... .::. . :. :.::.:....: :: ::
CCDS34 LKPPRGGDQNLLPTMSRSLSVPDSGRLWDVHTSASSQSGGEA-SLWDIPINSSTQGPILE
620 630 640 650 660 670
750 760 770 780 790 800
pF1KSD QLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEE
::: .: :::::.:.:::::::::::.:: :::: ::::...:.::::
CCDS34 QLQLQHKF------QERREVELRAKREEEERKRREEKRRQQ------QQEEQKRRQEEEE
680 690 700 710 720
810 820 830 840 850 860
pF1KSD LARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEELLRKQE
: :::.
CCDS34 LFRRKHV-----------------------------------------------------
730
870 880 890 900 910 920
pF1KSD EEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQE
::.::.
CCDS34 ----------------------------------------------RQQELL--------
930 940 950 960 970 980
pF1KSD ALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERERQLREEQ
:. ::::: . .: . . : :
CCDS34 -LKLLQQQQA------VPVPPAPS-----------SPPPL--------------------
740 750 760
990 1000 1010 1020 1030 1040
pF1KSD RRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQQHQ
:....: . . :.:::.: : ::..:: ..
CCDS34 ------------------------WAGLAKQGLSMKTLLELQLEGERQLHKQPPPRE---
770 780 790
1050 1060 1070 1080 1090 1100
pF1KSD QPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWASDLVSSIWSNADTK---NSNMGFWDD
: ::. .: .... :...:.: :::.:. .. .:.. : . .:..:.:.:
CCDS34 -PARAQAPNH---RVQL-----GGLGTAPLNQWVSE-AGPLWGGPDKSGGGSSGLGLWED
800 810 820 830 840
1110 1120 1130 1140 1150
pF1KSD AVKEVGP--RNSTNKN-KNNASLSKSVG-VSNRQ-NKKVEEEEKLLKLFQGVNKAQDGFT
. : : :. :: ... ::: : . .:.: ::.:::::::::.::. . :::::
CCDS34 TPKSGGSLVRGLGLKNSRSSPSLSDSYSHLSGRPIRKKTEEEEKLLKLLQGIPRPQDGFT
850 860 870 880 890 900
1160 1170 1180 1190 1200 1210
pF1KSD QWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLGDTSEAKEFAKQFLERRA
::::::::.:.....:::: :..::::::::.::::::. :::: ::::::::::::::
CCDS34 QWCEQMLHTLSATGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERRA
910 920 930 940 950 960
1220 1230 1240 1250 1260 1270
pF1KSD KQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHSTLHSVFQTNQSNNQQSNFE
::::.::::::: .: .. ..:...::.:.: ...
CCDS34 KQKASQQRQQQQ---------------------EAW-LSSASLQTAFQANHS----TKLG
970 980 990
1280 1290 1300 1310 1320
pF1KSD AVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDDY
...: :.. :...:::.::.:...:: ::::..:::
CCDS34 PGEGSKAKRRALMLHSDPSILGYSLHGSS-----GEIESVDDY
1000 1010 1020 1030
1320 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 18:35:10 2016 done: Thu Nov 3 18:35:11 2016
Total Scan time: 6.070 Total Display time: 0.290
Function used was FASTA [36.3.4 Apr, 2011]