Result of FASTA (omim) for
pF1KSDA0652
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0652, 517 aa
1>>>pF1KSDA0652 517 - 517 aa - 517 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5518+/-0.000341; mu= 13.2185+/- 0.021
mean_var=108.4638+/-21.912, 0's: 0 Z-trim(116.3): 65 B-trim: 0 in 0/56
Lambda= 0.123149
statistics sampled from 27344 (27409) to 27344 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.321), width: 16
Scan time: 8.900
The best scores are: opt bits E(85289)
NP_001333257 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333249 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333251 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001192049 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333261 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333259 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333256 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
XP_016874096 (OMIM: 615088) PREDICTED: autophagy-r ( 517) 3419 618.3 1.7e-176
XP_016874092 (OMIM: 615088) PREDICTED: autophagy-r ( 517) 3419 618.3 1.7e-176
NP_001333252 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333248 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001136145 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333254 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333258 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333260 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333255 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333250 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333253 (OMIM: 615088) autophagy-related prot ( 517) 3419 618.3 1.7e-176
NP_001333269 (OMIM: 615088) autophagy-related prot ( 503) 2708 492.0 1.7e-138
NP_001333267 (OMIM: 615088) autophagy-related prot ( 503) 2708 492.0 1.7e-138
NP_001333288 (OMIM: 615088) autophagy-related prot ( 322) 2162 394.9 1.9e-109
NP_001333287 (OMIM: 615088) autophagy-related prot ( 322) 2162 394.9 1.9e-109
NP_001333286 (OMIM: 615088) autophagy-related prot ( 322) 2162 394.9 1.9e-109
NP_001333246 (OMIM: 615088) autophagy-related prot ( 541) 1757 323.1 1.3e-87
XP_011518802 (OMIM: 615088) PREDICTED: autophagy-r ( 541) 1757 323.1 1.3e-87
NP_001333247 (OMIM: 615088) autophagy-related prot ( 541) 1757 323.1 1.3e-87
NP_001333262 (OMIM: 615088) autophagy-related prot ( 508) 1744 320.7 6.4e-87
NP_001333264 (OMIM: 615088) autophagy-related prot ( 508) 1744 320.7 6.4e-87
NP_001333263 (OMIM: 615088) autophagy-related prot ( 508) 1744 320.7 6.4e-87
NP_001333266 (OMIM: 615088) autophagy-related prot ( 508) 1744 320.7 6.4e-87
XP_011518804 (OMIM: 615088) PREDICTED: autophagy-r ( 508) 1744 320.7 6.4e-87
NP_001333265 (OMIM: 615088) autophagy-related prot ( 508) 1744 320.7 6.4e-87
XP_011518798 (OMIM: 615088) PREDICTED: autophagy-r ( 550) 1744 320.7 6.8e-87
XP_011518795 (OMIM: 615088) PREDICTED: autophagy-r ( 550) 1744 320.7 6.8e-87
XP_006718459 (OMIM: 615088) PREDICTED: autophagy-r ( 550) 1744 320.7 6.8e-87
NP_001333245 (OMIM: 615088) autophagy-related prot ( 550) 1744 320.7 6.8e-87
NP_001192048 (OMIM: 615088) autophagy-related prot ( 550) 1744 320.7 6.8e-87
XP_005253325 (OMIM: 615088) PREDICTED: autophagy-r ( 550) 1744 320.7 6.8e-87
XP_011518801 (OMIM: 615088) PREDICTED: autophagy-r ( 550) 1744 320.7 6.8e-87
NP_001333242 (OMIM: 615088) autophagy-related prot ( 550) 1744 320.7 6.8e-87
XP_005253323 (OMIM: 615088) PREDICTED: autophagy-r ( 550) 1744 320.7 6.8e-87
NP_001333243 (OMIM: 615088) autophagy-related prot ( 550) 1744 320.7 6.8e-87
XP_005253322 (OMIM: 615088) PREDICTED: autophagy-r ( 550) 1744 320.7 6.8e-87
NP_001333244 (OMIM: 615088) autophagy-related prot ( 550) 1744 320.7 6.8e-87
XP_016874088 (OMIM: 615088) PREDICTED: autophagy-r ( 550) 1744 320.7 6.8e-87
NP_001333241 (OMIM: 615088) autophagy-related prot ( 550) 1744 320.7 6.8e-87
NP_001333240 (OMIM: 615088) autophagy-related prot ( 550) 1744 320.7 6.8e-87
NP_001333284 (OMIM: 615088) autophagy-related prot ( 466) 1738 319.6 1.2e-86
NP_001333285 (OMIM: 615088) autophagy-related prot ( 466) 1738 319.6 1.2e-86
NP_001333273 (OMIM: 615088) autophagy-related prot ( 480) 1738 319.6 1.3e-86
>>NP_001333257 (OMIM: 615088) autophagy-related protein (517 aa)
initn: 3419 init1: 3419 opt: 3419 Z-score: 3289.7 bits: 618.3 E(85289): 1.7e-176
Smith-Waterman score: 3419; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KSD METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
430 440 450 460 470 480
490 500 510
pF1KSD IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
:::::::::::::::::::::::::::::::::::::
NP_001 IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
490 500 510
>>NP_001333249 (OMIM: 615088) autophagy-related protein (517 aa)
initn: 3419 init1: 3419 opt: 3419 Z-score: 3289.7 bits: 618.3 E(85289): 1.7e-176
Smith-Waterman score: 3419; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KSD METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
430 440 450 460 470 480
490 500 510
pF1KSD IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
:::::::::::::::::::::::::::::::::::::
NP_001 IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
490 500 510
>>NP_001333251 (OMIM: 615088) autophagy-related protein (517 aa)
initn: 3419 init1: 3419 opt: 3419 Z-score: 3289.7 bits: 618.3 E(85289): 1.7e-176
Smith-Waterman score: 3419; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KSD METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
430 440 450 460 470 480
490 500 510
pF1KSD IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
:::::::::::::::::::::::::::::::::::::
NP_001 IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
490 500 510
>>NP_001192049 (OMIM: 615088) autophagy-related protein (517 aa)
initn: 3419 init1: 3419 opt: 3419 Z-score: 3289.7 bits: 618.3 E(85289): 1.7e-176
Smith-Waterman score: 3419; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KSD METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
430 440 450 460 470 480
490 500 510
pF1KSD IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
:::::::::::::::::::::::::::::::::::::
NP_001 IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
490 500 510
>>NP_001333261 (OMIM: 615088) autophagy-related protein (517 aa)
initn: 3419 init1: 3419 opt: 3419 Z-score: 3289.7 bits: 618.3 E(85289): 1.7e-176
Smith-Waterman score: 3419; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KSD METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
430 440 450 460 470 480
490 500 510
pF1KSD IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
:::::::::::::::::::::::::::::::::::::
NP_001 IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
490 500 510
>>NP_001333259 (OMIM: 615088) autophagy-related protein (517 aa)
initn: 3419 init1: 3419 opt: 3419 Z-score: 3289.7 bits: 618.3 E(85289): 1.7e-176
Smith-Waterman score: 3419; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KSD METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
430 440 450 460 470 480
490 500 510
pF1KSD IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
:::::::::::::::::::::::::::::::::::::
NP_001 IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
490 500 510
>>NP_001333256 (OMIM: 615088) autophagy-related protein (517 aa)
initn: 3419 init1: 3419 opt: 3419 Z-score: 3289.7 bits: 618.3 E(85289): 1.7e-176
Smith-Waterman score: 3419; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KSD METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
430 440 450 460 470 480
490 500 510
pF1KSD IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
:::::::::::::::::::::::::::::::::::::
NP_001 IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
490 500 510
>>XP_016874096 (OMIM: 615088) PREDICTED: autophagy-relat (517 aa)
initn: 3419 init1: 3419 opt: 3419 Z-score: 3289.7 bits: 618.3 E(85289): 1.7e-176
Smith-Waterman score: 3419; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KSD METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
430 440 450 460 470 480
490 500 510
pF1KSD IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
:::::::::::::::::::::::::::::::::::::
XP_016 IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
490 500 510
>>XP_016874092 (OMIM: 615088) PREDICTED: autophagy-relat (517 aa)
initn: 3419 init1: 3419 opt: 3419 Z-score: 3289.7 bits: 618.3 E(85289): 1.7e-176
Smith-Waterman score: 3419; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KSD METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
430 440 450 460 470 480
490 500 510
pF1KSD IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
:::::::::::::::::::::::::::::::::::::
XP_016 IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
490 500 510
>>NP_001333252 (OMIM: 615088) autophagy-related protein (517 aa)
initn: 3419 init1: 3419 opt: 3419 Z-score: 3289.7 bits: 618.3 E(85289): 1.7e-176
Smith-Waterman score: 3419; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
pF1KSD METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTETVSNSSEGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
430 440 450 460 470 480
490 500 510
pF1KSD IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
:::::::::::::::::::::::::::::::::::::
NP_001 IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
490 500 510
517 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 02:30:56 2016 done: Thu Nov 3 02:30:57 2016
Total Scan time: 8.900 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]