Result of FASTA (omim) for
pF1KSDA0717
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0717, 727 aa
1>>>pF1KSDA0717 727 - 727 aa - 727 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2151+/-0.000329; mu= 18.9125+/- 0.021
mean_var=148.8133+/-30.044, 0's: 0 Z-trim(120.5): 87 B-trim: 363 in 1/58
Lambda= 0.105136
statistics sampled from 35750 (35846) to 35750 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.42), width: 16
Scan time: 9.780
The best scores are: opt bits E(85289)
NP_055993 (OMIM: 607352) rho-related BTB domain-co ( 727) 4989 768.7 0
NP_001153509 (OMIM: 607352) rho-related BTB domain ( 734) 4989 768.8 0
XP_016868740 (OMIM: 607352) PREDICTED: rho-related ( 749) 4989 768.8 0
NP_001153508 (OMIM: 607352) rho-related BTB domain ( 749) 4989 768.8 0
XP_011538730 (OMIM: 607351) PREDICTED: rho-related ( 530) 1814 287.0 1.3e-76
XP_011538728 (OMIM: 607351) PREDICTED: rho-related ( 611) 1814 287.1 1.4e-76
XP_016872491 (OMIM: 607351) PREDICTED: rho-related ( 621) 1814 287.1 1.5e-76
XP_011538727 (OMIM: 607351) PREDICTED: rho-related ( 621) 1814 287.1 1.5e-76
XP_006718147 (OMIM: 607351) PREDICTED: rho-related ( 696) 1814 287.1 1.6e-76
XP_011538726 (OMIM: 607351) PREDICTED: rho-related ( 696) 1814 287.1 1.6e-76
NP_001229288 (OMIM: 607351) rho-related BTB domain ( 696) 1814 287.1 1.6e-76
XP_016872489 (OMIM: 607351) PREDICTED: rho-related ( 696) 1814 287.1 1.6e-76
NP_055651 (OMIM: 607351) rho-related BTB domain-co ( 696) 1814 287.1 1.6e-76
XP_006718148 (OMIM: 607351) PREDICTED: rho-related ( 696) 1814 287.1 1.6e-76
XP_016872490 (OMIM: 607351) PREDICTED: rho-related ( 696) 1814 287.1 1.6e-76
XP_016872495 (OMIM: 607351) PREDICTED: rho-related ( 576) 1509 240.8 1.2e-62
XP_016872496 (OMIM: 607351) PREDICTED: rho-related ( 576) 1509 240.8 1.2e-62
XP_016872494 (OMIM: 607351) PREDICTED: rho-related ( 576) 1509 240.8 1.2e-62
XP_016872492 (OMIM: 607351) PREDICTED: rho-related ( 576) 1509 240.8 1.2e-62
XP_016872493 (OMIM: 607351) PREDICTED: rho-related ( 576) 1509 240.8 1.2e-62
XP_016872497 (OMIM: 607351) PREDICTED: rho-related ( 576) 1509 240.8 1.2e-62
NP_001300870 (OMIM: 165390) transforming protein R ( 193) 385 69.7 1.2e-11
NP_001655 (OMIM: 165390) transforming protein RhoA ( 193) 385 69.7 1.2e-11
NP_061485 (OMIM: 602048) ras-related C3 botulinum ( 211) 369 67.4 6.9e-11
NP_005043 (OMIM: 602050) ras-related C3 botulinum ( 192) 365 66.7 9.8e-11
NP_008839 (OMIM: 602048) ras-related C3 botulinum ( 192) 365 66.7 9.8e-11
NP_001036144 (OMIM: 165380) rho-related GTP-bindin ( 193) 354 65.0 3.1e-10
NP_001036143 (OMIM: 165380) rho-related GTP-bindin ( 193) 354 65.0 3.1e-10
NP_786886 (OMIM: 165380) rho-related GTP-binding p ( 193) 354 65.0 3.1e-10
NP_002863 (OMIM: 602049,608203) ras-related C3 bot ( 192) 351 64.6 4.3e-10
XP_016864725 (OMIM: 607353) PREDICTED: rho-related ( 417) 352 65.1 6.4e-10
XP_016864726 (OMIM: 607353) PREDICTED: rho-related ( 417) 352 65.1 6.4e-10
NP_001300873 (OMIM: 165390) transforming protein R ( 173) 345 63.6 7.5e-10
NP_055714 (OMIM: 607353) rho-related BTB domain-co ( 611) 352 65.3 8.2e-10
NP_001656 (OMIM: 179505) rho-related GTP-binding p ( 191) 341 63.1 1.2e-09
XP_016873208 (OMIM: 179505) PREDICTED: rho-related ( 191) 341 63.1 1.2e-09
XP_005252973 (OMIM: 179505) PREDICTED: rho-related ( 191) 341 63.1 1.2e-09
NP_004031 (OMIM: 165370) rho-related GTP-binding p ( 196) 332 61.7 3.2e-09
XP_011541581 (OMIM: 607353) PREDICTED: rho-related ( 489) 336 62.8 3.8e-09
NP_426359 (OMIM: 116952,616737) cell division cont ( 191) 327 60.9 5.3e-09
NP_055393 (OMIM: 605781) rho-related GTP-binding p ( 210) 327 61.0 5.7e-09
NP_001782 (OMIM: 116952,616737) cell division cont ( 191) 326 60.8 5.9e-09
NP_001034891 (OMIM: 116952,616737) cell division c ( 191) 326 60.8 5.9e-09
NP_036381 (OMIM: 605857) rho-related GTP-binding p ( 205) 307 57.9 4.6e-08
NP_001300874 (OMIM: 165390) transforming protein R ( 112) 296 56.0 9.8e-08
XP_011531030 (OMIM: 605857) PREDICTED: rho-related ( 157) 294 55.8 1.5e-07
XP_011523619 (OMIM: 601555) PREDICTED: rho-related ( 206) 295 56.1 1.6e-07
NP_005431 (OMIM: 601555) rho-related GTP-binding p ( 227) 295 56.2 1.7e-07
XP_011523618 (OMIM: 601555) PREDICTED: rho-related ( 234) 295 56.2 1.8e-07
NP_067028 (OMIM: 606366) rho-related GTP-binding p ( 258) 292 55.8 2.6e-07
>>NP_055993 (OMIM: 607352) rho-related BTB domain-contai (727 aa)
initn: 4989 init1: 4989 opt: 4989 Z-score: 4097.4 bits: 768.7 E(85289): 0
Smith-Waterman score: 4989; 100.0% identity (100.0% similar) in 727 aa overlap (1-727:1-727)
10 20 30 40 50 60
pF1KSD MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD MWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDEAGGSGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDEAGGSGPA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD GLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVKMDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVKMDSS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD IQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 IQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD AFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVESSTRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 AFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVESSTRE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD VVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVTGLME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVTGLME
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD ATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPENQEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPENQEY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD FEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSSAASSSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSSAASSSSP
670 680 690 700 710 720
pF1KSD SSSSAVV
:::::::
NP_055 SSSSAVV
>>NP_001153509 (OMIM: 607352) rho-related BTB domain-con (734 aa)
initn: 4989 init1: 4989 opt: 4989 Z-score: 4097.3 bits: 768.8 E(85289): 0
Smith-Waterman score: 4989; 100.0% identity (100.0% similar) in 727 aa overlap (1-727:8-734)
10 20 30 40 50
pF1KSD MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTV
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKARSRLMDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KSD WAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KSD SLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD GREVAKELGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GREVAKELGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPF
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD LPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFY
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD DLFLMDLSEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLFLMDLSEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KSD AGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMV
370 380 390 400 410 420
420 430 440 450 460 470
pF1KSD VVKMDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVKMDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAF
430 440 450 460 470 480
480 490 500 510 520 530
pF1KSD MNQEITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNQEITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPF
490 500 510 520 530 540
540 550 560 570 580 590
pF1KSD VESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQY
550 560 570 580 590 600
600 610 620 630 640 650
pF1KSD TVTGLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVTGLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAM
610 620 630 640 650 660
660 670 680 690 700 710
pF1KSD SPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSS
670 680 690 700 710 720
720
pF1KSD AASSSSPSSSSAVV
::::::::::::::
NP_001 AASSSSPSSSSAVV
730
>>XP_016868740 (OMIM: 607352) PREDICTED: rho-related BTB (749 aa)
initn: 4989 init1: 4989 opt: 4989 Z-score: 4097.2 bits: 768.8 E(85289): 0
Smith-Waterman score: 4989; 100.0% identity (100.0% similar) in 727 aa overlap (1-727:23-749)
10 20 30
pF1KSD MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNA
::::::::::::::::::::::::::::::::::::::
XP_016 MQAWRKGPDGPQKTSSDSMSRLMDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KSD TLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYG
70 80 90 100 110 120
100 110 120 130 140 150
pF1KSD RSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRP
130 140 150 160 170 180
160 170 180 190 200 210
pF1KSD LARPIKPNEILPPEKGREVAKELGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LARPIKPNEILPPEKGREVAKELGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWK
190 200 210 220 230 240
220 230 240 250 260 270
pF1KSD SHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRI
250 260 270 280 290 300
280 290 300 310 320 330
pF1KSD FAHKIYLSTSSSKFYDLFLMDLSEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FAHKIYLSTSSSKFYDLFLMDLSEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDF
310 320 330 340 350 360
340 350 360 370 380 390
pF1KSD LLRAASFDVCESVDEAGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLRAASFDVCESVDEAGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQE
370 380 390 400 410 420
400 410 420 430 440 450
pF1KSD EMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVF
430 440 450 460 470 480
460 470 480 490 500 510
pF1KSD DLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLL
490 500 510 520 530 540
520 530 540 550 560 570
pF1KSD ISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILA
550 560 570 580 590 600
580 590 600 610 620 630
pF1KSD NRLCLPHLVALTEQYTVTGLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRLCLPHLVALTEQYTVTGLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTN
610 620 630 640 650 660
640 650 660 670 680 690
pF1KSD YNNVCRKFPRDMKAMSPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YNNVCRKFPRDMKAMSPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPK
670 680 690 700 710 720
700 710 720
pF1KSD RRWLFWNSPSSPSSSAASSSSPSSSSAVV
:::::::::::::::::::::::::::::
XP_016 RRWLFWNSPSSPSSSAASSSSPSSSSAVV
730 740
>>NP_001153508 (OMIM: 607352) rho-related BTB domain-con (749 aa)
initn: 4989 init1: 4989 opt: 4989 Z-score: 4097.2 bits: 768.8 E(85289): 0
Smith-Waterman score: 4989; 100.0% identity (100.0% similar) in 727 aa overlap (1-727:23-749)
10 20 30
pF1KSD MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNA
::::::::::::::::::::::::::::::::::::::
NP_001 MQAWRKGPDGPQKTSSDSMSRLMDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KSD TLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYG
70 80 90 100 110 120
100 110 120 130 140 150
pF1KSD RSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRP
130 140 150 160 170 180
160 170 180 190 200 210
pF1KSD LARPIKPNEILPPEKGREVAKELGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LARPIKPNEILPPEKGREVAKELGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWK
190 200 210 220 230 240
220 230 240 250 260 270
pF1KSD SHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRI
250 260 270 280 290 300
280 290 300 310 320 330
pF1KSD FAHKIYLSTSSSKFYDLFLMDLSEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAHKIYLSTSSSKFYDLFLMDLSEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDF
310 320 330 340 350 360
340 350 360 370 380 390
pF1KSD LLRAASFDVCESVDEAGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLRAASFDVCESVDEAGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQE
370 380 390 400 410 420
400 410 420 430 440 450
pF1KSD EMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVF
430 440 450 460 470 480
460 470 480 490 500 510
pF1KSD DLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLL
490 500 510 520 530 540
520 530 540 550 560 570
pF1KSD ISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILA
550 560 570 580 590 600
580 590 600 610 620 630
pF1KSD NRLCLPHLVALTEQYTVTGLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRLCLPHLVALTEQYTVTGLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTN
610 620 630 640 650 660
640 650 660 670 680 690
pF1KSD YNNVCRKFPRDMKAMSPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YNNVCRKFPRDMKAMSPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPK
670 680 690 700 710 720
700 710 720
pF1KSD RRWLFWNSPSSPSSSAASSSSPSSSSAVV
:::::::::::::::::::::::::::::
NP_001 RRWLFWNSPSSPSSSAASSSSPSSSSAVV
730 740
>>XP_011538730 (OMIM: 607351) PREDICTED: rho-related BTB (530 aa)
initn: 2532 init1: 1811 opt: 1814 Z-score: 1496.3 bits: 287.0 E(85289): 1.3e-76
Smith-Waterman score: 2541; 70.0% identity (86.6% similar) in 544 aa overlap (1-540:1-525)
10 20 30 40 50 60
pF1KSD MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYR
::.::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
XP_011 MDADMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKT
::::::::::::::.::::::::::::::::::::::::::::::::::::::::.:::.
XP_011 VCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD MWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKE
::::::::::::.::::::::::::::::::::::::::::::: ..:::::::::::::
XP_011 MWYPEIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPP
::.::::::: :::::::::::::::::::::::::::::..::.::::::::::: ::
XP_011 LGLPYYETSVFDQFGIKDVFDNAIRAALISRRHLQFWKSHLKKVQKPLLQAPFLPPKAPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDL
:.: .:. :: . . : ::..::::::...::.. .::::.:::.::::::::::::.
XP_011 PVIKIPECPSMGTNEAACLLDNPLCADVLFILQDQEHIFAHRIYLATSSSKFYDLFLMEC
250 260 270 280 290 300
310 320 330 340 350
pF1KSD SEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDEAGGSGP-
:. :.:. .: ..... .::: : : : : .:. :
XP_011 EES-------PNGS-----EGACEKEKQ------SRDFQGRILSVDPEEEREEGPPRIPQ
310 320 330 340
360 370 380 390 400 410
pF1KSD AGLRASTSDGILRGNGT---GYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVK
: :.. ..... : : .: . ..:..::..:.....:: .:.. . :.::.
XP_011 ADQWKSSNKSLVEALGLEAEGAVP-ETQTLTGWSKGFIGMHREMQVNPISKRMGPMTVVR
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD MDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQ
::.:.::::::..:..::::.:::.:.::. .:.:::.::.::::::: ::.:.::::::
XP_011 MDASVQPGPFRTLLQFLYTGQLDEKEKDLVGLAQIAEVLEMFDLRMMVENIMNKEAFMNQ
410 420 430 440 450 460
480 490 500 510 520 530
pF1KSD EITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVES
:::::::::..::.::::.::::::::: ::::.::::::::: ::.:::::::: ::::
XP_011 EITKAFHVRKANRIKECLSKGTFSDVTFKLDDGAISAHKPLLICSCEWMAAMFGGSFVES
470 480 490 500 510 520
540 550 560 570 580 590
pF1KSD STREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVT
.. :
XP_011 ANSESRPHP
530
>>XP_011538728 (OMIM: 607351) PREDICTED: rho-related BTB (611 aa)
initn: 2755 init1: 1811 opt: 1814 Z-score: 1495.6 bits: 287.1 E(85289): 1.4e-76
Smith-Waterman score: 2726; 68.4% identity (86.0% similar) in 598 aa overlap (1-594:1-579)
10 20 30 40 50 60
pF1KSD MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYR
::.::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
XP_011 MDADMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKT
::::::::::::::.::::::::::::::::::::::::::::::::::::::::.:::.
XP_011 VCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD MWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKE
::::::::::::.::::::::::::::::::::::::::::::: ..:::::::::::::
XP_011 MWYPEIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPP
::.::::::: :::::::::::::::::::::::::::::..::.::::::::::: ::
XP_011 LGLPYYETSVFDQFGIKDVFDNAIRAALISRRHLQFWKSHLKKVQKPLLQAPFLPPKAPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDL
:.: .:. :: . . : ::..::::::...::.. .::::.:::.::::::::::::.
XP_011 PVIKIPECPSMGTNEAACLLDNPLCADVLFILQDQEHIFAHRIYLATSSSKFYDLFLMEC
250 260 270 280 290 300
310 320 330 340 350
pF1KSD SEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDEAGGSGP-
:. :.:. .: ..... .::: : : : : .:. :
XP_011 EES-------PNGS-----EGACEKEKQ------SRDFQGRILSVDPEEEREEGPPRIPQ
310 320 330 340
360 370 380 390 400 410
pF1KSD AGLRASTSDGILRGNGT---GYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVK
: :.. ..... : : .: . ..:..::..:.....:: .:.. . :.::.
XP_011 ADQWKSSNKSLVEALGLEAEGAVP-ETQTLTGWSKGFIGMHREMQVNPISKRMGPMTVVR
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD MDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQ
::.:.::::::..:..::::.:::.:.::. .:.:::.::.::::::: ::.:.::::::
XP_011 MDASVQPGPFRTLLQFLYTGQLDEKEKDLVGLAQIAEVLEMFDLRMMVENIMNKEAFMNQ
410 420 430 440 450 460
480 490 500 510 520 530
pF1KSD EITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVES
:::::::::..::.::::.::::::::: ::::.::::::::: ::.:::::::: ::::
XP_011 EITKAFHVRKANRIKECLSKGTFSDVTFKLDDGAISAHKPLLICSCEWMAAMFGGSFVES
470 480 490 500 510 520
540 550 560 570 580 590
pF1KSD STREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVT
.. :: .: .: :.:::.:::: ... . ::: ..:: ::::.::::::::.. ..
XP_011 ANSEVYLPNINKISMQAVLDYLYTKQLSPNLDLDPLELIALANRFCLPHLVALADLFSWE
530 540 550 560 570 580
600 610 620 630 640 650
pF1KSD GLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPE
XP_011 AEAGLHRIYELKCLSLEFRSSASFTLHQRS
590 600 610
>>XP_016872491 (OMIM: 607351) PREDICTED: rho-related BTB (621 aa)
initn: 2806 init1: 1811 opt: 1814 Z-score: 1495.5 bits: 287.1 E(85289): 1.5e-76
Smith-Waterman score: 2807; 68.1% identity (85.4% similar) in 624 aa overlap (1-620:1-605)
10 20 30 40 50 60
pF1KSD MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYR
::.::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
XP_016 MDADMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKT
::::::::::::::.::::::::::::::::::::::::::::::::::::::::.:::.
XP_016 VCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD MWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKE
::::::::::::.::::::::::::::::::::::::::::::: ..:::::::::::::
XP_016 MWYPEIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPP
::.::::::: :::::::::::::::::::::::::::::..::.::::::::::: ::
XP_016 LGLPYYETSVFDQFGIKDVFDNAIRAALISRRHLQFWKSHLKKVQKPLLQAPFLPPKAPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDL
:.: .:. :: . . : ::..::::::...::.. .::::.:::.::::::::::::.
XP_016 PVIKIPECPSMGTNEAACLLDNPLCADVLFILQDQEHIFAHRIYLATSSSKFYDLFLMEC
250 260 270 280 290 300
310 320 330 340 350
pF1KSD SEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDEAGGSGP-
:. :.:. .: ..... .::: : : : : .:. :
XP_016 EES-------PNGS-----EGACEKEKQ------SRDFQGRILSVDPEEEREEGPPRIPQ
310 320 330 340
360 370 380 390 400 410
pF1KSD AGLRASTSDGILRGNGT---GYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVK
: :.. ..... : : .: . ..:..::..:.....:: .:.. . :.::.
XP_016 ADQWKSSNKSLVEALGLEAEGAVP-ETQTLTGWSKGFIGMHREMQVNPISKRMGPMTVVR
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD MDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQ
::.:.::::::..:..::::.:::.:.::. .:.:::.::.::::::: ::.:.::::::
XP_016 MDASVQPGPFRTLLQFLYTGQLDEKEKDLVGLAQIAEVLEMFDLRMMVENIMNKEAFMNQ
410 420 430 440 450 460
480 490 500 510 520 530
pF1KSD EITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVES
:::::::::..::.::::.::::::::: ::::.::::::::: ::.:::::::: ::::
XP_016 EITKAFHVRKANRIKECLSKGTFSDVTFKLDDGAISAHKPLLICSCEWMAAMFGGSFVES
470 480 490 500 510 520
540 550 560 570 580 590
pF1KSD STREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVT
.. :: .: .: :.:::.:::: ... . ::: ..:: ::::.::::::::.::..:
XP_016 ANSEVYLPNINKISMQAVLDYLYTKQLSPNLDLDPLELIALANRFCLPHLVALAEQHAVQ
530 540 550 560 570 580
600 610 620 630 640 650
pF1KSD GLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPE
: .:. : :::.:: .:::::
XP_016 ELTKAATSGVGIDGEVLSYLELAQTTRNTSSGTAGPLCGT
590 600 610 620
>>XP_011538727 (OMIM: 607351) PREDICTED: rho-related BTB (621 aa)
initn: 2806 init1: 1811 opt: 1814 Z-score: 1495.5 bits: 287.1 E(85289): 1.5e-76
Smith-Waterman score: 2807; 68.1% identity (85.4% similar) in 624 aa overlap (1-620:1-605)
10 20 30 40 50 60
pF1KSD MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYR
::.::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
XP_011 MDADMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKT
::::::::::::::.::::::::::::::::::::::::::::::::::::::::.:::.
XP_011 VCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD MWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKE
::::::::::::.::::::::::::::::::::::::::::::: ..:::::::::::::
XP_011 MWYPEIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPP
::.::::::: :::::::::::::::::::::::::::::..::.::::::::::: ::
XP_011 LGLPYYETSVFDQFGIKDVFDNAIRAALISRRHLQFWKSHLKKVQKPLLQAPFLPPKAPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDL
:.: .:. :: . . : ::..::::::...::.. .::::.:::.::::::::::::.
XP_011 PVIKIPECPSMGTNEAACLLDNPLCADVLFILQDQEHIFAHRIYLATSSSKFYDLFLMEC
250 260 270 280 290 300
310 320 330 340 350
pF1KSD SEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDEAGGSGP-
:. :.:. .: ..... .::: : : : : .:. :
XP_011 EES-------PNGS-----EGACEKEKQ------SRDFQGRILSVDPEEEREEGPPRIPQ
310 320 330 340
360 370 380 390 400 410
pF1KSD AGLRASTSDGILRGNGT---GYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVK
: :.. ..... : : .: . ..:..::..:.....:: .:.. . :.::.
XP_011 ADQWKSSNKSLVEALGLEAEGAVP-ETQTLTGWSKGFIGMHREMQVNPISKRMGPMTVVR
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD MDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQ
::.:.::::::..:..::::.:::.:.::. .:.:::.::.::::::: ::.:.::::::
XP_011 MDASVQPGPFRTLLQFLYTGQLDEKEKDLVGLAQIAEVLEMFDLRMMVENIMNKEAFMNQ
410 420 430 440 450 460
480 490 500 510 520 530
pF1KSD EITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVES
:::::::::..::.::::.::::::::: ::::.::::::::: ::.:::::::: ::::
XP_011 EITKAFHVRKANRIKECLSKGTFSDVTFKLDDGAISAHKPLLICSCEWMAAMFGGSFVES
470 480 490 500 510 520
540 550 560 570 580 590
pF1KSD STREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVT
.. :: .: .: :.:::.:::: ... . ::: ..:: ::::.::::::::.::..:
XP_011 ANSEVYLPNINKISMQAVLDYLYTKQLSPNLDLDPLELIALANRFCLPHLVALAEQHAVQ
530 540 550 560 570 580
600 610 620 630 640 650
pF1KSD GLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPE
: .:. : :::.:: .:::::
XP_011 ELTKAATSGVGIDGEVLSYLELAQTTRNTSSGTAGPLCGT
590 600 610 620
>>XP_006718147 (OMIM: 607351) PREDICTED: rho-related BTB (696 aa)
initn: 3279 init1: 1811 opt: 1814 Z-score: 1494.9 bits: 287.1 E(85289): 1.6e-76
Smith-Waterman score: 3282; 68.0% identity (85.3% similar) in 715 aa overlap (1-711:1-694)
10 20 30 40 50 60
pF1KSD MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYR
::.::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
XP_006 MDADMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKT
::::::::::::::.::::::::::::::::::::::::::::::::::::::::.:::.
XP_006 VCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD MWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKE
::::::::::::.::::::::::::::::::::::::::::::: ..:::::::::::::
XP_006 MWYPEIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPP
::.::::::: :::::::::::::::::::::::::::::..::.::::::::::: ::
XP_006 LGLPYYETSVFDQFGIKDVFDNAIRAALISRRHLQFWKSHLKKVQKPLLQAPFLPPKAPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDL
:.: .:. :: . . : ::..::::::...::.. .::::.:::.::::::::::::.
XP_006 PVIKIPECPSMGTNEAACLLDNPLCADVLFILQDQEHIFAHRIYLATSSSKFYDLFLMEC
250 260 270 280 290 300
310 320 330 340 350
pF1KSD SEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDEAGGSGP-
:. :.:. .: ... ...::: : : : : .:. :
XP_006 EES-------PNGS-----EGACEKE------KQSRDFQGRILSVDPEEEREEGPPRIPQ
310 320 330 340
360 370 380 390 400 410
pF1KSD AGLRASTSDGILRGNGT---GYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVK
: :.. ..... : : .: . ..:..::..:.....:: .:.. . :.::.
XP_006 ADQWKSSNKSLVEALGLEAEGAVP-ETQTLTGWSKGFIGMHREMQVNPISKRMGPMTVVR
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD MDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQ
::.:.::::::..:..::::.:::.:.::. .:.:::.::.::::::: ::.:.::::::
XP_006 MDASVQPGPFRTLLQFLYTGQLDEKEKDLVGLAQIAEVLEMFDLRMMVENIMNKEAFMNQ
410 420 430 440 450 460
480 490 500 510 520 530
pF1KSD EITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVES
:::::::::..::.::::.::::::::: ::::.::::::::: ::.:::::::: ::::
XP_006 EITKAFHVRKANRIKECLSKGTFSDVTFKLDDGAISAHKPLLICSCEWMAAMFGGSFVES
470 480 490 500 510 520
540 550 560 570 580 590
pF1KSD STREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVT
.. :: .: .: :.:::.:::: ... . ::: ..:: ::::.::::::::.::..:
XP_006 ANSEVYLPNINKISMQAVLDYLYTKQLSPNLDLDPLELIALANRFCLPHLVALAEQHAVQ
530 540 550 560 570 580
600 610 620 630 640 650
pF1KSD GLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPE
: .:. : :::.:: .::::::: :.::: :::::::::::.:: :: ...:. : .
XP_006 ELTKAATSGVGIDGEVLSYLELAQFHNAHQLAAWCLHHICTNYNSVCSKFRKEIKSKSAD
590 600 610 620 630 640
660 670 680 690 700 710
pF1KSD NQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSSAAS
::::::.:::::::::::::::::...:::::: :.. .:.: :::: ::.
XP_006 NQEYFERHRWPPVWYLKEEDHYQRVKREREKEDIALNKHRSRRKWCFWNS--SPAVA
650 660 670 680 690
720
pF1KSD SSSPSSSSAVV
>>XP_011538726 (OMIM: 607351) PREDICTED: rho-related BTB (696 aa)
initn: 3279 init1: 1811 opt: 1814 Z-score: 1494.9 bits: 287.1 E(85289): 1.6e-76
Smith-Waterman score: 3282; 68.0% identity (85.3% similar) in 715 aa overlap (1-711:1-694)
10 20 30 40 50 60
pF1KSD MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYR
::.::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
XP_011 MDADMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKT
::::::::::::::.::::::::::::::::::::::::::::::::::::::::.:::.
XP_011 VCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD MWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKE
::::::::::::.::::::::::::::::::::::::::::::: ..:::::::::::::
XP_011 MWYPEIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPP
::.::::::: :::::::::::::::::::::::::::::..::.::::::::::: ::
XP_011 LGLPYYETSVFDQFGIKDVFDNAIRAALISRRHLQFWKSHLKKVQKPLLQAPFLPPKAPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDL
:.: .:. :: . . : ::..::::::...::.. .::::.:::.::::::::::::.
XP_011 PVIKIPECPSMGTNEAACLLDNPLCADVLFILQDQEHIFAHRIYLATSSSKFYDLFLMEC
250 260 270 280 290 300
310 320 330 340 350
pF1KSD SEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDEAGGSGP-
:. :.:. .: ... ...::: : : : : .:. :
XP_011 EES-------PNGS-----EGACEKE------KQSRDFQGRILSVDPEEEREEGPPRIPQ
310 320 330 340
360 370 380 390 400 410
pF1KSD AGLRASTSDGILRGNGT---GYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVK
: :.. ..... : : .: . ..:..::..:.....:: .:.. . :.::.
XP_011 ADQWKSSNKSLVEALGLEAEGAVP-ETQTLTGWSKGFIGMHREMQVNPISKRMGPMTVVR
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD MDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQ
::.:.::::::..:..::::.:::.:.::. .:.:::.::.::::::: ::.:.::::::
XP_011 MDASVQPGPFRTLLQFLYTGQLDEKEKDLVGLAQIAEVLEMFDLRMMVENIMNKEAFMNQ
410 420 430 440 450 460
480 490 500 510 520 530
pF1KSD EITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVES
:::::::::..::.::::.::::::::: ::::.::::::::: ::.:::::::: ::::
XP_011 EITKAFHVRKANRIKECLSKGTFSDVTFKLDDGAISAHKPLLICSCEWMAAMFGGSFVES
470 480 490 500 510 520
540 550 560 570 580 590
pF1KSD STREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVT
.. :: .: .: :.:::.:::: ... . ::: ..:: ::::.::::::::.::..:
XP_011 ANSEVYLPNINKISMQAVLDYLYTKQLSPNLDLDPLELIALANRFCLPHLVALAEQHAVQ
530 540 550 560 570 580
600 610 620 630 640 650
pF1KSD GLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPE
: .:. : :::.:: .::::::: :.::: :::::::::::.:: :: ...:. : .
XP_011 ELTKAATSGVGIDGEVLSYLELAQFHNAHQLAAWCLHHICTNYNSVCSKFRKEIKSKSAD
590 600 610 620 630 640
660 670 680 690 700 710
pF1KSD NQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSSAAS
::::::.:::::::::::::::::...:::::: :.. .:.: :::: ::.
XP_011 NQEYFERHRWPPVWYLKEEDHYQRVKREREKEDIALNKHRSRRKWCFWNS--SPAVA
650 660 670 680 690
720
pF1KSD SSSPSSSSAVV
727 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 02:46:16 2016 done: Thu Nov 3 02:46:18 2016
Total Scan time: 9.780 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]