Result of FASTA (omim) for pF1KSDA0862
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0862, 582 aa
  1>>>pF1KSDA0862 582 - 582 aa - 582 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.7086+/-0.00048; mu= 13.3468+/- 0.030
 mean_var=157.6249+/-32.882, 0's: 0 Z-trim(113.8): 432  B-trim: 1092 in 1/53
 Lambda= 0.102156
 statistics sampled from 22882 (23389) to 22882 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.63), E-opt: 0.2 (0.274), width:  16
 Scan time: 10.500

The best scores are:                                      opt bits E(85289)
XP_016872191 (OMIM: 602775,607721) PREDICTED: leuc ( 582) 3700 558.1 2.8e-158
NP_031399 (OMIM: 602775,607721) leucine-rich repea ( 582) 3700 558.1 2.8e-158
XP_016872193 (OMIM: 602775,607721) PREDICTED: leuc ( 582) 3700 558.1 2.8e-158
NP_001311265 (OMIM: 602775,607721) leucine-rich re ( 582) 3700 558.1 2.8e-158
NP_001311266 (OMIM: 602775,607721) leucine-rich re ( 582) 3700 558.1 2.8e-158
XP_016872192 (OMIM: 602775,607721) PREDICTED: leuc ( 582) 3700 558.1 2.8e-158
NP_001255968 (OMIM: 602775,607721) leucine-rich re ( 536) 2190 335.5 2.6e-91
XP_011513029 (OMIM: 608195) PREDICTED: leucine-ric ( 465)  520 89.3 2.9e-17
NP_060684 (OMIM: 608195) leucine-rich repeat-conta ( 524)  520 89.4 3.2e-17
XP_011513028 (OMIM: 608195) PREDICTED: leucine-ric ( 524)  520 89.4 3.2e-17
NP_056171 (OMIM: 607733) protein scribble homolog  (1630)  516 89.3   1e-16
NP_874365 (OMIM: 607733) protein scribble homolog  (1655)  516 89.3 1.1e-16
XP_006714723 (OMIM: 606944) PREDICTED: protein LAP (1246)  502 87.1 3.6e-16
XP_016865126 (OMIM: 606944) PREDICTED: protein LAP (1298)  502 87.2 3.7e-16
NP_001006600 (OMIM: 606944) erbin isoform 7 [Homo  (1302)  502 87.2 3.7e-16
NP_001240627 (OMIM: 606944) erbin isoform 4 [Homo  (1346)  502 87.2 3.8e-16
NP_001240630 (OMIM: 606944) erbin isoform 9 [Homo  (1367)  502 87.2 3.9e-16
NP_061165 (OMIM: 606944) erbin isoform 2 [Homo sap (1371)  502 87.2 3.9e-16
NP_001240626 (OMIM: 606944) erbin isoform 1 [Homo  (1412)  502 87.2   4e-16
XP_016865125 (OMIM: 606944) PREDICTED: protein LAP (1415)  502 87.2   4e-16
NP_001240628 (OMIM: 606944) erbin isoform 8 [Homo  (1419)  502 87.2   4e-16
XP_005248612 (OMIM: 606944) PREDICTED: protein LAP (1456)  502 87.2   4e-16
XP_005248611 (OMIM: 606944) PREDICTED: protein LAP (1460)  502 87.2 4.1e-16
XP_016865124 (OMIM: 606944) PREDICTED: protein LAP (1460)  502 87.2 4.1e-16
NP_001243193 (OMIM: 600362) protein flightless-1 h (1258)  489 85.2 1.4e-15
XP_005256615 (OMIM: 600362) PREDICTED: protein fli (1268)  489 85.2 1.4e-15
NP_002009 (OMIM: 600362) protein flightless-1 homo (1269)  489 85.2 1.4e-15
XP_005256613 (OMIM: 600362) PREDICTED: protein fli (1295)  489 85.2 1.4e-15
XP_005256612 (OMIM: 600362) PREDICTED: protein fli (1296)  489 85.2 1.4e-15
XP_016866486 (OMIM: 608195) PREDICTED: leucine-ric ( 331)  476 82.7 2.1e-15
NP_001275932 (OMIM: 611066) PH domain leucine-rich (1256)  467 82.0 1.3e-14
NP_003658 (OMIM: 606667) leucine-rich repeat-conta ( 907)  449 79.2 6.6e-14
XP_016857384 (OMIM: 614453) PREDICTED: leucine-ric (1255)  450 79.5 7.4e-14
XP_016857383 (OMIM: 614453) PREDICTED: leucine-ric (1438)  450 79.5 8.1e-14
XP_016857382 (OMIM: 614453) PREDICTED: leucine-ric (1472)  450 79.5 8.3e-14
XP_016857381 (OMIM: 614453) PREDICTED: leucine-ric (1490)  450 79.6 8.3e-14
NP_001317564 (OMIM: 614453) leucine-rich repeat-co (1495)  450 79.6 8.3e-14
XP_016857379 (OMIM: 614453) PREDICTED: leucine-ric (1528)  450 79.6 8.5e-14
XP_016857378 (OMIM: 614453) PREDICTED: leucine-ric (1537)  450 79.6 8.5e-14
NP_065845 (OMIM: 614453) leucine-rich repeat-conta (1537)  450 79.6 8.5e-14
XP_016857377 (OMIM: 614453) PREDICTED: leucine-ric (1541)  450 79.6 8.5e-14
XP_016857376 (OMIM: 614453) PREDICTED: leucine-ric (1547)  450 79.6 8.5e-14
XP_016857374 (OMIM: 614453) PREDICTED: leucine-ric (1594)  450 79.6 8.7e-14
XP_016857375 (OMIM: 614453) PREDICTED: leucine-ric (1594)  450 79.6 8.7e-14
NP_055835 (OMIM: 611066) PH domain leucine-rich re (1323)  425 75.8 9.9e-13
NP_919431 (OMIM: 609396) PH domain leucine-rich re (1717)  422 75.5 1.6e-12
NP_056165 (OMIM: 612888) volume-regulated anion ch ( 803)  414 74.0 2.2e-12
XP_011539447 (OMIM: 612888) PREDICTED: volume-regu ( 803)  414 74.0 2.2e-12
XP_011539446 (OMIM: 612888) PREDICTED: volume-regu ( 803)  414 74.0 2.2e-12
XP_011539445 (OMIM: 612888) PREDICTED: volume-regu ( 803)  414 74.0 2.2e-12


>>XP_016872191 (OMIM: 602775,607721) PREDICTED: leucine-  (582 aa)
 initn: 3700 init1: 3700 opt: 3700  Z-score: 2962.5  bits: 558.1 E(85289): 2.8e-158
Smith-Waterman score: 3700; 99.8% identity (100.0% similar) in 582 aa overlap (1-582:1-582)

               10        20        30        40        50        60
pF1KSD MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_016 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
              490       500       510       520       530       540

              550       560       570       580  
pF1KSD SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
       ::::::::::::::::::::::::::::::::::::::::::
XP_016 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
              550       560       570       580  

>>NP_031399 (OMIM: 602775,607721) leucine-rich repeat pr  (582 aa)
 initn: 3700 init1: 3700 opt: 3700  Z-score: 2962.5  bits: 558.1 E(85289): 2.8e-158
Smith-Waterman score: 3700; 99.8% identity (100.0% similar) in 582 aa overlap (1-582:1-582)

               10        20        30        40        50        60
pF1KSD MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
NP_031 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
              490       500       510       520       530       540

              550       560       570       580  
pF1KSD SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
       ::::::::::::::::::::::::::::::::::::::::::
NP_031 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
              550       560       570       580  

>>XP_016872193 (OMIM: 602775,607721) PREDICTED: leucine-  (582 aa)
 initn: 3700 init1: 3700 opt: 3700  Z-score: 2962.5  bits: 558.1 E(85289): 2.8e-158
Smith-Waterman score: 3700; 99.8% identity (100.0% similar) in 582 aa overlap (1-582:1-582)

               10        20        30        40        50        60
pF1KSD MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_016 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
              490       500       510       520       530       540

              550       560       570       580  
pF1KSD SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
       ::::::::::::::::::::::::::::::::::::::::::
XP_016 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
              550       560       570       580  

>>NP_001311265 (OMIM: 602775,607721) leucine-rich repeat  (582 aa)
 initn: 3700 init1: 3700 opt: 3700  Z-score: 2962.5  bits: 558.1 E(85289): 2.8e-158
Smith-Waterman score: 3700; 99.8% identity (100.0% similar) in 582 aa overlap (1-582:1-582)

               10        20        30        40        50        60
pF1KSD MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
NP_001 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
              490       500       510       520       530       540

              550       560       570       580  
pF1KSD SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
       ::::::::::::::::::::::::::::::::::::::::::
NP_001 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
              550       560       570       580  

>>NP_001311266 (OMIM: 602775,607721) leucine-rich repeat  (582 aa)
 initn: 3700 init1: 3700 opt: 3700  Z-score: 2962.5  bits: 558.1 E(85289): 2.8e-158
Smith-Waterman score: 3700; 99.8% identity (100.0% similar) in 582 aa overlap (1-582:1-582)

               10        20        30        40        50        60
pF1KSD MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
NP_001 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
              490       500       510       520       530       540

              550       560       570       580  
pF1KSD SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
       ::::::::::::::::::::::::::::::::::::::::::
NP_001 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
              550       560       570       580  

>>XP_016872192 (OMIM: 602775,607721) PREDICTED: leucine-  (582 aa)
 initn: 3700 init1: 3700 opt: 3700  Z-score: 2962.5  bits: 558.1 E(85289): 2.8e-158
Smith-Waterman score: 3700; 99.8% identity (100.0% similar) in 582 aa overlap (1-582:1-582)

               10        20        30        40        50        60
pF1KSD MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
XP_016 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
              490       500       510       520       530       540

              550       560       570       580  
pF1KSD SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
       ::::::::::::::::::::::::::::::::::::::::::
XP_016 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
              550       560       570       580  

>>NP_001255968 (OMIM: 602775,607721) leucine-rich repeat  (536 aa)
 initn: 2188 init1: 2188 opt: 2190  Z-score: 1760.2  bits: 335.5 E(85289): 2.6e-91
Smith-Waterman score: 3288; 91.9% identity (92.1% similar) in 582 aa overlap (1-582:1-536)

               10        20        30        40        50        60
pF1KSD MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::     
NP_001 LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIG-----
              190       200       210       220       230          

              250       260       270       280       290       300
pF1KSD ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
                                                :::::::::::::::::::
NP_001 -----------------------------------------NLSSLSRLGLRYNRLSAIP
                                                  240       250    

              310       320       330       340       350       360
pF1KSD RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
          260       270       280       290       300       310    

              370       380       390       400       410       420
pF1KSD NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
          320       330       340       350       360       370    

              430       440       450       460       470       480
pF1KSD VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
          380       390       400       410       420       430    

              490       500       510       520       530       540
pF1KSD NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
NP_001 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
          440       450       460       470       480       490    

              550       560       570       580  
pF1KSD SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
       ::::::::::::::::::::::::::::::::::::::::::
NP_001 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
          500       510       520       530      

>>XP_011513029 (OMIM: 608195) PREDICTED: leucine-rich re  (465 aa)
 initn: 889 init1: 470 opt: 520  Z-score: 430.8  bits: 89.3 E(85289): 2.9e-17
Smith-Waterman score: 538; 32.3% identity (58.4% similar) in 452 aa overlap (89-522:37-454)

       60        70        80        90       100       110        
pF1KSD AAQPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSS
                                     :. . .. :.  .    :.:   .  :: :
XP_011 TSGHKVFMGGEEKGELHLGNFYELCQQEIPEIPESISFCKALQVA--DFSGNPLTRLPES
         10        20        30        40        50          60    

      120       130       140       150       160       170        
pF1KSD IKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRH
       . :: .:: : . . .::::: ..: : :: .: : :: :: ::::: .:..:. ::: .
XP_011 FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGN
           70        80        90       100       110       120    

      180       190       200       210       220       230        
pF1KSD NKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELC
       :.. ..:  .  :  :  :.:          :              :....:: :::.: 
XP_011 NEIYNLPESIGALLHLKDLWL----------D-------------GNQLSELPQEIGNLK
          130       140                              150       160 

      240       250       260       270       280       290        
pF1KSD NLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSA
       ::. :::..:.::.::.::.. :..:.: ...: :  .:: ::.:..:: : .  :::. 
XP_011 NLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQ
             170       180       190       200       210       220 

      300       310       320       330       340         350      
pF1KSD IPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYP--VGGPSQFST
       .:.....: .: :: : .:.. :::.:. ..: ::..:.  :: .   :  .::  .. :
XP_011 LPEAVGECESLTELVLTENQLLTLPKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCSL-T
             230       240        250       260       270          

        360       370       380       390       400       410      
pF1KSD IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQ---
       .. .  . ::...::  . :.:  :  :..  :.:  :::.. :  ..  : :. ::   
XP_011 VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSL-TALKLKALWLSDNQSQP
     280         290        300       310        320       330     

           420       430       440       450       460             
pF1KSD LTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-------
       :  .  :..  .. .  ::.  :: .::      ..: .    :: .... .:       
XP_011 LLTFQTDTDYTTGEK--ILTCVLLPQLPSEPTCQENLPRCGALENLVNDVSDEAWNERAV
         340       350         360       370       380       390   

             470       480       490       500        510       520
pF1KSD -----IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLG-ENLLTHLPEEIGTLENLE
            : ...: .:    :.  : : :.  :  .: :.    ::: . .    :   : .
XP_011 NRVSAIRFVED-EKDEEDNETRTLLRRATPHPGELKHMKKTVENLRNDMNAAKGLDSNKN
           400        410       420       430       440       450  

              530       540       550       560       570       580
pF1KSD ELYLNDNPNLHSLPLELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRA
       :.                                                          
XP_011 EVNHAIDRVTTSV                                               
            460                                                    

>>NP_060684 (OMIM: 608195) leucine-rich repeat-containin  (524 aa)
 initn: 470 init1: 470 opt: 520  Z-score: 430.2  bits: 89.4 E(85289): 3.2e-17
Smith-Waterman score: 652; 31.1% identity (65.6% similar) in 395 aa overlap (169-562:12-379)

      140       150       160       170       180       190        
pF1KSD PAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD-SLTTL
                                     .... .: :: .:  .:  .::   ::  :
NP_060                    MFHCIPLWRCNRHVESIDKRHCSLVYVPEEIYRYARSLEEL
                                  10        20        30        40 

       200       210       220       230       240       250       
pF1KSD YLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEI
        :  :..  . ... .: ::  :.. .:.:..:: ::... .:. :::..:.. ..:. :
NP_060 LLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESI
              50        60        70        80        90       100 

       260       270       280       290       300       310       
pF1KSD GNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENN
       . :  .   :.. : :  ::... .:..:. :..    :...:.....   :  :.:..:
NP_060 SFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELREN
             110       120       130       140       150       160 

       320       330       340       350       360       370       
pF1KSD NISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSR
        .. ::.::                         .:.  .  :.. .:.: ..: .: . 
NP_060 LLTYLPDSL-------------------------TQLRRLEELDLGNNEIYNLPESIGAL
             170                                180       190      

       380       390       400       410       420       430       
pF1KSD AKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLL
        . :. : .  :::. :: ..:.  ... :... :.: ..::..:::.::  :..:.:::
NP_060 LH-LKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLL
         200       210       220       230       240       250     

       440       450       460       470       480       490       
pF1KSD KKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT
       . .: :.:.:.::  : ...:.: .::. ..  ..: .::::.::: :::..::.: .:.
NP_060 ETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLS
         260       270       280       290       300       310     

       500       510       520       530       540       550       
pF1KSD HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALCSKLSIMSIENCPLSHLP
       .:.  .: :. ::.:::   .:  . . ::  :  .: :..  ..: .... .  : :::
NP_060 NLNADRNKLVSLPKEIGGCCSLTVFCVRDN-RLTRIPAEVSQATELHVLDVAGNRLLHLP
         320       330       340        350       360       370    

       560       570       580                                     
pF1KSD PQIVAGGPSFIIQFLKMQGPYRAMV                                   
        ...:                                                       
NP_060 LSLTALKLKALWLSDNQSQPLLTFQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPRCGA
          380       390       400       410       420       430    

>>XP_011513028 (OMIM: 608195) PREDICTED: leucine-rich re  (524 aa)
 initn: 470 init1: 470 opt: 520  Z-score: 430.2  bits: 89.4 E(85289): 3.2e-17
Smith-Waterman score: 652; 31.1% identity (65.6% similar) in 395 aa overlap (169-562:12-379)

      140       150       160       170       180       190        
pF1KSD PAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD-SLTTL
                                     .... .: :: .:  .:  .::   ::  :
XP_011                    MFHCIPLWRCNRHVESIDKRHCSLVYVPEEIYRYARSLEEL
                                  10        20        30        40 

       200       210       220       230       240       250       
pF1KSD YLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEI
        :  :..  . ... .: ::  :.. .:.:..:: ::... .:. :::..:.. ..:. :
XP_011 LLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESI
              50        60        70        80        90       100 

       260       270       280       290       300       310       
pF1KSD GNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENN
       . :  .   :.. : :  ::... .:..:. :..    :...:.....   :  :.:..:
XP_011 SFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELREN
             110       120       130       140       150       160 

       320       330       340       350       360       370       
pF1KSD NISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSR
        .. ::.::                         .:.  .  :.. .:.: ..: .: . 
XP_011 LLTYLPDSL-------------------------TQLRRLEELDLGNNEIYNLPESIGAL
             170                                180       190      

       380       390       400       410       420       430       
pF1KSD AKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLL
        . :. : .  :::. :: ..:.  ... :... :.: ..::..:::.::  :..:.:::
XP_011 LH-LKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLL
         200       210       220       230       240       250     

       440       450       460       470       480       490       
pF1KSD KKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT
       . .: :.:.:.::  : ...:.: .::. ..  ..: .::::.::: :::..::.: .:.
XP_011 ETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLS
         260       270       280       290       300       310     

       500       510       520       530       540       550       
pF1KSD HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALCSKLSIMSIENCPLSHLP
       .:.  .: :. ::.:::   .:  . . ::  :  .: :..  ..: .... .  : :::
XP_011 NLNADRNKLVSLPKEIGGCCSLTVFCVRDN-RLTRIPAEVSQATELHVLDVAGNRLLHLP
         320       330       340        350       360       370    

       560       570       580                                     
pF1KSD PQIVAGGPSFIIQFLKMQGPYRAMV                                   
        ...:                                                       
XP_011 LSLTALKLKALWLSDNQSQPLLTFQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPRCGA
          380       390       400       410       420       430    




582 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 03:50:13 2016 done: Thu Nov  3 03:50:14 2016
 Total Scan time: 10.500 Total Display time:  0.130

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com