Result of FASTA (omim) for pF1KSDA0875
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0875, 621 aa
  1>>>pF1KSDA0875 621 - 621 aa - 621 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4051+/-0.000446; mu= 18.4486+/- 0.028
 mean_var=70.8896+/-14.196, 0's: 0 Z-trim(109.9): 23  B-trim: 127 in 1/53
 Lambda= 0.152329
 statistics sampled from 18140 (18156) to 18140 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.57), E-opt: 0.2 (0.213), width:  16
 Scan time:  9.230

The best scores are:                                      opt bits E(85289)
NP_055817 (OMIM: 609095) F-box only protein 21 iso ( 621) 4189 930.5       0
NP_296373 (OMIM: 609095) F-box only protein 21 iso ( 628) 4165 925.2       0
XP_016874528 (OMIM: 609095) PREDICTED: F-box only  ( 468) 3157 703.7 3.7e-202
XP_016874527 (OMIM: 609095) PREDICTED: F-box only  ( 561) 2265 507.7 4.5e-143
XP_016874526 (OMIM: 609095) PREDICTED: F-box only  ( 568) 2265 507.7 4.5e-143


>>NP_055817 (OMIM: 609095) F-box only protein 21 isoform  (621 aa)
 initn: 4189 init1: 4189 opt: 4189  Z-score: 4974.2  bits: 930.5 E(85289):    0
Smith-Waterman score: 4189; 100.0% identity (100.0% similar) in 621 aa overlap (1-621:1-621)

               10        20        30        40        50        60
pF1KSD MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD RLRELCQSSGKVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RLRELCQSSGKVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD FFSEHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FFSEHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD NLKAFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 NLKAFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD SLAFKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SLAFKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD PISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYIDAFGKGKQLTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYIDAFGKGKQLTV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD KECEYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KECEYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD DQVQLLLLQARLYFHLGIWPEKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIERKKEEVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DQVQLLLLQARLYFHLGIWPEKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIERKKEEVG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD VEVKLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VEVKLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHH
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KSD QPFYNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAELEIRYPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QPFYNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAELEIRYPED
              550       560       570       580       590       600

              610       620 
pF1KSD LEFVYETVQNIYSAKKENIDE
       :::::::::::::::::::::
NP_055 LEFVYETVQNIYSAKKENIDE
              610       620 

>>NP_296373 (OMIM: 609095) F-box only protein 21 isoform  (628 aa)
 initn: 2937 init1: 2937 opt: 4165  Z-score: 4945.6  bits: 925.2 E(85289):    0
Smith-Waterman score: 4165; 98.9% identity (98.9% similar) in 628 aa overlap (1-621:1-628)

               10        20        30        40        50        60
pF1KSD MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_296 MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD RLRELCQSSGKVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_296 RLRELCQSSGKVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD FFSEHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_296 FFSEHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD NLKAFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_296 NLKAFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD SLAFKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_296 SLAFKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD PISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYIDAFGKGKQLTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_296 PISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYIDAFGKGKQLTV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD KECEYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_296 KECEYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYP
              370       380       390       400       410       420

              430       440              450       460       470   
pF1KSD DQVQLLLLQARLYFHLGIWPEK-------VLDILQHIQTLDPGQHGAVGYLVQHTLEHIE
       ::::::::::::::::::::::       :::::::::::::::::::::::::::::::
NP_296 DQVQLLLLQARLYFHLGIWPEKSFCLVLKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIE
              430       440       450       460       470       480

           480       490       500       510       520       530   
pF1KSD RKKEEVGVEVKLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_296 RKKEEVGVEVKLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVH
              490       500       510       520       530       540

           540       550       560       570       580       590   
pF1KSD SLPHGHHQPFYNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_296 SLPHGHHQPFYNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAEL
              550       560       570       580       590       600

           600       610       620 
pF1KSD EIRYPEDLEFVYETVQNIYSAKKENIDE
       ::::::::::::::::::::::::::::
NP_296 EIRYPEDLEFVYETVQNIYSAKKENIDE
              610       620        

>>XP_016874528 (OMIM: 609095) PREDICTED: F-box only prot  (468 aa)
 initn: 3157 init1: 3157 opt: 3157  Z-score: 3750.3  bits: 703.7 E(85289): 3.7e-202
Smith-Waterman score: 3157; 100.0% identity (100.0% similar) in 468 aa overlap (154-621:1-468)

           130       140       150       160       170       180   
pF1KSD EHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILNNLK
                                     ::::::::::::::::::::::::::::::
XP_016                               MEGRKALTWKYYAKKILYYLRQQKILNNLK
                                             10        20        30

           190       200       210       220       230       240   
pF1KSD AFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHPSLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHPSLA
               40        50        60        70        80        90

           250       260       270       280       290       300   
pF1KSD FKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGIPIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGIPIS
              100       110       120       130       140       150

           310       320       330       340       350       360   
pF1KSD MSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYIDAFGKGKQLTVKEC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYIDAFGKGKQLTVKEC
              160       170       180       190       200       210

           370       380       390       400       410       420   
pF1KSD EYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYPDQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYPDQV
              220       230       240       250       260       270

           430       440       450       460       470       480   
pF1KSD QLLLLQARLYFHLGIWPEKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIERKKEEVGVEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLLLLQARLYFHLGIWPEKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIERKKEEVGVEV
              280       290       300       310       320       330

           490       500       510       520       530       540   
pF1KSD KLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPF
              340       350       360       370       380       390

           550       560       570       580       590       600   
pF1KSD YNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAELEIRYPEDLEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAELEIRYPEDLEF
              400       410       420       430       440       450

           610       620 
pF1KSD VYETVQNIYSAKKENIDE
       ::::::::::::::::::
XP_016 VYETVQNIYSAKKENIDE
              460        

>>XP_016874527 (OMIM: 609095) PREDICTED: F-box only prot  (561 aa)
 initn: 2265 init1: 2265 opt: 2265  Z-score: 2689.7  bits: 507.7 E(85289): 4.5e-143
Smith-Waterman score: 3677; 90.3% identity (90.3% similar) in 621 aa overlap (1-621:1-561)

               10        20        30        40        50        60
pF1KSD MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD RLRELCQSSGKVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLRELCQSSGKVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD FFSEHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FFSEHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD NLKAFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLKAFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD SLAFKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLAFKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD PISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYIDAFGKGKQLTV
       ::::::::::::::::::::::::::::::::::::::                      
XP_016 PISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEG----------------------
              310       320       330                              

              370       380       390       400       410       420
pF1KSD KECEYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYP
                                             ::::::::::::::::::::::
XP_016 --------------------------------------EGIDQSYQLLRDSLDLYLAMYP
                                            340       350       360

              430       440       450       460       470       480
pF1KSD DQVQLLLLQARLYFHLGIWPEKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIERKKEEVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DQVQLLLLQARLYFHLGIWPEKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIERKKEEVG
              370       380       390       400       410       420

              490       500       510       520       530       540
pF1KSD VEVKLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEVKLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHH
              430       440       450       460       470       480

              550       560       570       580       590       600
pF1KSD QPFYNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAELEIRYPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPFYNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAELEIRYPED
              490       500       510       520       530       540

              610       620 
pF1KSD LEFVYETVQNIYSAKKENIDE
       :::::::::::::::::::::
XP_016 LEFVYETVQNIYSAKKENIDE
              550       560 

>>XP_016874526 (OMIM: 609095) PREDICTED: F-box only prot  (568 aa)
 initn: 3509 init1: 2265 opt: 2265  Z-score: 2689.6  bits: 507.7 E(85289): 4.5e-143
Smith-Waterman score: 3653; 89.3% identity (89.3% similar) in 628 aa overlap (1-621:1-568)

               10        20        30        40        50        60
pF1KSD MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD RLRELCQSSGKVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLRELCQSSGKVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD FFSEHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FFSEHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD NLKAFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLKAFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD SLAFKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLAFKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD PISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYIDAFGKGKQLTV
       ::::::::::::::::::::::::::::::::::::::                      
XP_016 PISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEG----------------------
              310       320       330                              

              370       380       390       400       410       420
pF1KSD KECEYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYP
                                             ::::::::::::::::::::::
XP_016 --------------------------------------EGIDQSYQLLRDSLDLYLAMYP
                                            340       350       360

              430       440              450       460       470   
pF1KSD DQVQLLLLQARLYFHLGIWPEK-------VLDILQHIQTLDPGQHGAVGYLVQHTLEHIE
       ::::::::::::::::::::::       :::::::::::::::::::::::::::::::
XP_016 DQVQLLLLQARLYFHLGIWPEKSFCLVLKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIE
              370       380       390       400       410       420

           480       490       500       510       520       530   
pF1KSD RKKEEVGVEVKLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKKEEVGVEVKLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVH
              430       440       450       460       470       480

           540       550       560       570       580       590   
pF1KSD SLPHGHHQPFYNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLPHGHHQPFYNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAEL
              490       500       510       520       530       540

           600       610       620 
pF1KSD EIRYPEDLEFVYETVQNIYSAKKENIDE
       ::::::::::::::::::::::::::::
XP_016 EIRYPEDLEFVYETVQNIYSAKKENIDE
              550       560        




621 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 03:52:41 2016 done: Thu Nov  3 03:52:42 2016
 Total Scan time:  9.230 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com