Result of FASTA (ccds) for
pF1KSDA0920
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0920, 1103 aa
1>>>pF1KSDA0920 1103 - 1103 aa - 1103 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.7444+/-0.000972; mu= 4.7238+/- 0.059
mean_var=251.5853+/-50.408, 0's: 0 Z-trim(114.1): 18 B-trim: 261 in 1/52
Lambda= 0.080860
statistics sampled from 14716 (14731) to 14716 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.742), E-opt: 0.2 (0.453), width: 16
Scan time: 4.120
The best scores are: opt bits E(32554)
CCDS35100.1 AKAP2 gene_id:445815|Hs108|chr9 (1103) 7217 855.6 0
CCDS35101.1 AKAP2 gene_id:445815|Hs108|chr9 (1090) 6936 822.8 0
CCDS56581.1 AKAP2 gene_id:11217|Hs108|chr9 ( 961) 5989 712.3 1.3e-204
CCDS43861.1 AKAP2 gene_id:11217|Hs108|chr9 ( 948) 5708 679.5 9.6e-195
CCDS48003.1 AKAP2 gene_id:11217|Hs108|chr9 ( 859) 5457 650.2 5.8e-186
CCDS48002.2 PALM2 gene_id:114299|Hs108|chr9 ( 411) 1071 138.3 3.4e-32
CCDS35099.1 PALM2 gene_id:114299|Hs108|chr9 ( 379) 815 108.4 3.1e-23
>>CCDS35100.1 AKAP2 gene_id:445815|Hs108|chr9 (1103 aa)
initn: 7217 init1: 7217 opt: 7217 Z-score: 4560.2 bits: 855.6 E(32554): 0
Smith-Waterman score: 7217; 100.0% identity (100.0% similar) in 1103 aa overlap (1-1103:1-1103)
10 20 30 40 50 60
pF1KSD MAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EEEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 EEEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD DFQKGFSSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKEGESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DFQKGFSSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKEGESA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SNATETSGPDMTIKKPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 SNATETSGPDMTIKKPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD CKSVPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCCDSAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 CKSVPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCCDSAV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD DGTYNGTSSPEPGAVVLVGGLSPPVHEATQPEPTERTASRQAPPHIELSNSSPDPMAEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DGTYNGTSSPEPGAVVLVGGLSPPVHEATQPEPTERTASRQAPPHIELSNSSPDPMAEAE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD RTNGHSPSQPRDALGDSLQVPVSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RTNGHSPSQPRDALGDSLQVPVSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PSKLFEDDEHEKEQYCIRKVRPSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 PSKLFEDDEHEKEQYCIRKVRPSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD IEEQLDEEHLESHKKYKERKERRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 IEEQLDEEHLESHKKYKERKERRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD DKAKEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DKAKEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD NPRPPSVGGPPEDSGASAAKGQKSPGALETPSAAGSQGNTASQGKEGPYSEPSKRGPLSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 NPRPPSVGGPPEDSGASAAKGQKSPGALETPSAAGSQGNTASQGKEGPYSEPSKRGPLSK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD LWAEDGEFTSARAVLTVVKDDDHGILDQFSRSVNVSLTQEELDSGLDELSVRSQDTTVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LWAEDGEFTSARAVLTVVKDDDHGILDQFSRSVNVSLTQEELDSGLDELSVRSQDTTVLE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD TLSNDFSMDNISDSGASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFSDHGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 TLSNDFSMDNISDSGASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFSDHGF
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD YSPSSTLGDSPLVDDPLEYQAGLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 YSPSSTLGDSPLVDDPLEYQAGLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD AEAAAFGSEKPQSMFEPPQVSSPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AEAAAFGSEKPQSMFEPPQVSSPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPI
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD NMEETRPEGSYFSKYSEAAELRSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 NMEETRPEGSYFSKYSEAAELRSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD QEREEELKRQRQVLQSTQSPRTKNAPSLPSRTCYKTAPGKIEKVKPPPSPTTEGPSLQPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 QEREEELKRQRQVLQSTQSPRTKNAPSLPSRTCYKTAPGKIEKVKPPPSPTTEGPSLQPD
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD LAPEEAAGTQRPKNLMQTLMEDYETHKSKRRERMDDSSYTSKLLSCKVTSEVLEATRVNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LAPEEAAGTQRPKNLMQTLMEDYETHKSKRRERMDDSSYTSKLLSCKVTSEVLEATRVNR
1030 1040 1050 1060 1070 1080
1090 1100
pF1KSD RKSALALRWEAGIYANQEEEDNE
:::::::::::::::::::::::
CCDS35 RKSALALRWEAGIYANQEEEDNE
1090 1100
>>CCDS35101.1 AKAP2 gene_id:445815|Hs108|chr9 (1090 aa)
initn: 6936 init1: 6936 opt: 6936 Z-score: 4383.1 bits: 822.8 E(32554): 0
Smith-Waterman score: 7102; 98.8% identity (98.8% similar) in 1103 aa overlap (1-1103:1-1090)
10 20 30 40 50 60
pF1KSD MAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EEEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 EEEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD DFQKGFSSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKEGESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DFQKGFSSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKEGESA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SNATETSGPDMTIKKPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 SNATETSGPDMTIKKPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD CKSVPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCCDSAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 CKSVPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCCDSAV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD DGTYNGTSSPEPGAVVLVGGLSPPVHEATQPEPTERTASRQAPPHIELSNSSPDPMAEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DGTYNGTSSPEPGAVVLVGGLSPPVHEATQPEPTERTASRQAPPHIELSNSSPDPMAEAE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD RTNGHSPSQPRDALGDSLQVPVSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RTNGHSPSQPRDALGDSLQVPVSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PSKLFEDDEHEKEQYCIRKVRPSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 PSKLFEDDEHEKEQYCIRKVRPSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD IEEQLDEEHLESHKKYKERKERRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 IEEQLDEEHLESHKKYKERKERRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD DKAKEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DKAKEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD NPRPPSVGGPPEDSGASAAKGQKSPGALETPSAAGSQGNTASQGKEGPYSEPSKRGPLSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 NPRPPSVGGPPEDSGASAAKGQKSPGALETPSAAGSQGNTASQGKEGPYSEPSKRGPLSK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD LWAEDGEFTSARAVLTVVKDDDHGILDQFSRSVNVSLTQEELDSGLDELSVRSQDTTVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LWAEDGEFTSARAVLTVVKDDDHGILDQFSRSVNVSLTQEELDSGLDELSVRSQDTTVLE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD TLSNDFSMDNISDSGASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFSDHGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 TLSNDFSMDNISDSGASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFSDHGF
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD YSPSSTLGDSPLVDDPLEYQAGLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 YSPSSTLGDSPLVDDPLEYQAGLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD AEAAAFGSEKPQSMFEPPQVSSPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AEAAAFGSEKPQSMFEPPQVSSPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPI
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD NMEETRPEGSYFSKYSEAAELRSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 NMEETRPEGSYFSKYSEAAELRSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD QEREEELKRQRQVLQSTQSPRTKNAPSLPSRTCYKTAPGKIEKVKPPPSPTTEGPSLQPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 QEREEELKRQRQVLQSTQSPRTKNAPSLPSRTCYKTAPGKIEKVKPPPSPTTEGPSLQPD
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD LAPEEAAGTQRPKNLMQTLMEDYETHKSKRRERMDDSSYTSKLLSCKVTSEVLEATRVNR
:::::::::::::::::::::::::::::::::::::: :::::::::
CCDS35 LAPEEAAGTQRPKNLMQTLMEDYETHKSKRRERMDDSS-------------VLEATRVNR
1030 1040 1050 1060
1090 1100
pF1KSD RKSALALRWEAGIYANQEEEDNE
:::::::::::::::::::::::
CCDS35 RKSALALRWEAGIYANQEEEDNE
1070 1080 1090
>>CCDS56581.1 AKAP2 gene_id:11217|Hs108|chr9 (961 aa)
initn: 5989 init1: 5989 opt: 5989 Z-score: 3786.8 bits: 712.3 E(32554): 1.3e-204
Smith-Waterman score: 5996; 96.7% identity (97.3% similar) in 950 aa overlap (155-1103:22-961)
130 140 150 160 170 180
pF1KSD GFSSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKEGESASNAT
::: ::. : : .. .
CCDS56 MRWPQPGAAARLPPESPGPPESPGPPEREAAAARRW------TGAEPQDCA
10 20 30 40
190 200 210 220 230 240
pF1KSD ETSG-PDMTIKKPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAECKS
:: :. :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PGSGRPE----KPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAECKS
50 60 70 80 90 100
250 260 270 280 290 300
pF1KSD VPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCCDSAVDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCCDSAVDGT
110 120 130 140 150 160
310 320 330 340 350 360
pF1KSD YNGTSSPEPGAVVLVGGLSPPVHEATQPEPTERTASRQAPPHIELSNSSPDPMAEAERTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 YNGTSSPEPGAVVLVGGLSPPVHEATQPEPTERTASRQAPPHIELSNSSPDPMAEAERTN
170 180 190 200 210 220
370 380 390 400 410 420
pF1KSD GHSPSQPRDALGDSLQVPVSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKKPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GHSPSQPRDALGDSLQVPVSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKKPSK
230 240 250 260 270 280
430 440 450 460 470 480
pF1KSD LFEDDEHEKEQYCIRKVRPSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKTIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LFEDDEHEKEQYCIRKVRPSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKTIEE
290 300 310 320 330 340
490 500 510 520 530 540
pF1KSD QLDEEHLESHKKYKERKERRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMIDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QLDEEHLESHKKYKERKERRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMIDKA
350 360 370 380 390 400
550 560 570 580 590 600
pF1KSD KEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLTNPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLTNPR
410 420 430 440 450 460
610 620 630 640 650 660
pF1KSD PPSVGGPPEDSGASAAKGQKSPGALETPSAAGSQGNTASQGKEGPYSEPSKRGPLSKLWA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PPSVGGPPEDSGASAAKGQKSPGALETPSAAGSQGNTASQGKEGPYSEPSKRGPLSKLWA
470 480 490 500 510 520
670 680 690 700 710 720
pF1KSD EDGEFTSARAVLTVVKDDDHGILDQFSRSVNVSLTQEELDSGLDELSVRSQDTTVLETLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EDGEFTSARAVLTVVKDDDHGILDQFSRSVNVSLTQEELDSGLDELSVRSQDTTVLETLS
530 540 550 560 570 580
730 740 750 760 770 780
pF1KSD NDFSMDNISDSGASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFSDHGFYSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 NDFSMDNISDSGASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFSDHGFYSP
590 600 610 620 630 640
790 800 810 820 830 840
pF1KSD SSTLGDSPLVDDPLEYQAGLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEEAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SSTLGDSPLVDDPLEYQAGLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEEAEA
650 660 670 680 690 700
850 860 870 880 890 900
pF1KSD AAFGSEKPQSMFEPPQVSSPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPINME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AAFGSEKPQSMFEPPQVSSPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPINME
710 720 730 740 750 760
910 920 930 940 950 960
pF1KSD ETRPEGSYFSKYSEAAELRSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAAQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ETRPEGSYFSKYSEAAELRSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAAQER
770 780 790 800 810 820
970 980 990 1000 1010 1020
pF1KSD EEELKRQRQVLQSTQSPRTKNAPSLPSRTCYKTAPGKIEKVKPPPSPTTEGPSLQPDLAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EEELKRQRQVLQSTQSPRTKNAPSLPSRTCYKTAPGKIEKVKPPPSPTTEGPSLQPDLAP
830 840 850 860 870 880
1030 1040 1050 1060 1070 1080
pF1KSD EEAAGTQRPKNLMQTLMEDYETHKSKRRERMDDSSYTSKLLSCKVTSEVLEATRVNRRKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EEAAGTQRPKNLMQTLMEDYETHKSKRRERMDDSSYTSKLLSCKVTSEVLEATRVNRRKS
890 900 910 920 930 940
1090 1100
pF1KSD ALALRWEAGIYANQEEEDNE
::::::::::::::::::::
CCDS56 ALALRWEAGIYANQEEEDNE
950 960
>>CCDS43861.1 AKAP2 gene_id:11217|Hs108|chr9 (948 aa)
initn: 5708 init1: 5708 opt: 5708 Z-score: 3609.8 bits: 679.5 E(32554): 9.6e-195
Smith-Waterman score: 5881; 95.4% identity (95.9% similar) in 950 aa overlap (155-1103:22-948)
130 140 150 160 170 180
pF1KSD GFSSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKEGESASNAT
::: ::. : : .. .
CCDS43 MRWPQPGAAARLPPESPGPPESPGPPEREAAAARRW------TGAEPQDCA
10 20 30 40
190 200 210 220 230 240
pF1KSD ETSG-PDMTIKKPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAECKS
:: :. :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PGSGRPE----KPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAECKS
50 60 70 80 90 100
250 260 270 280 290 300
pF1KSD VPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCCDSAVDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCCDSAVDGT
110 120 130 140 150 160
310 320 330 340 350 360
pF1KSD YNGTSSPEPGAVVLVGGLSPPVHEATQPEPTERTASRQAPPHIELSNSSPDPMAEAERTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YNGTSSPEPGAVVLVGGLSPPVHEATQPEPTERTASRQAPPHIELSNSSPDPMAEAERTN
170 180 190 200 210 220
370 380 390 400 410 420
pF1KSD GHSPSQPRDALGDSLQVPVSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKKPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GHSPSQPRDALGDSLQVPVSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKKPSK
230 240 250 260 270 280
430 440 450 460 470 480
pF1KSD LFEDDEHEKEQYCIRKVRPSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKTIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LFEDDEHEKEQYCIRKVRPSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKTIEE
290 300 310 320 330 340
490 500 510 520 530 540
pF1KSD QLDEEHLESHKKYKERKERRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMIDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QLDEEHLESHKKYKERKERRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMIDKA
350 360 370 380 390 400
550 560 570 580 590 600
pF1KSD KEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLTNPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLTNPR
410 420 430 440 450 460
610 620 630 640 650 660
pF1KSD PPSVGGPPEDSGASAAKGQKSPGALETPSAAGSQGNTASQGKEGPYSEPSKRGPLSKLWA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PPSVGGPPEDSGASAAKGQKSPGALETPSAAGSQGNTASQGKEGPYSEPSKRGPLSKLWA
470 480 490 500 510 520
670 680 690 700 710 720
pF1KSD EDGEFTSARAVLTVVKDDDHGILDQFSRSVNVSLTQEELDSGLDELSVRSQDTTVLETLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EDGEFTSARAVLTVVKDDDHGILDQFSRSVNVSLTQEELDSGLDELSVRSQDTTVLETLS
530 540 550 560 570 580
730 740 750 760 770 780
pF1KSD NDFSMDNISDSGASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFSDHGFYSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NDFSMDNISDSGASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFSDHGFYSP
590 600 610 620 630 640
790 800 810 820 830 840
pF1KSD SSTLGDSPLVDDPLEYQAGLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEEAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SSTLGDSPLVDDPLEYQAGLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEEAEA
650 660 670 680 690 700
850 860 870 880 890 900
pF1KSD AAFGSEKPQSMFEPPQVSSPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPINME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AAFGSEKPQSMFEPPQVSSPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPINME
710 720 730 740 750 760
910 920 930 940 950 960
pF1KSD ETRPEGSYFSKYSEAAELRSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAAQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ETRPEGSYFSKYSEAAELRSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAAQER
770 780 790 800 810 820
970 980 990 1000 1010 1020
pF1KSD EEELKRQRQVLQSTQSPRTKNAPSLPSRTCYKTAPGKIEKVKPPPSPTTEGPSLQPDLAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EEELKRQRQVLQSTQSPRTKNAPSLPSRTCYKTAPGKIEKVKPPPSPTTEGPSLQPDLAP
830 840 850 860 870 880
1030 1040 1050 1060 1070 1080
pF1KSD EEAAGTQRPKNLMQTLMEDYETHKSKRRERMDDSSYTSKLLSCKVTSEVLEATRVNRRKS
::::::::::::::::::::::::::::::::::: ::::::::::::
CCDS43 EEAAGTQRPKNLMQTLMEDYETHKSKRRERMDDSS-------------VLEATRVNRRKS
890 900 910 920
1090 1100
pF1KSD ALALRWEAGIYANQEEEDNE
::::::::::::::::::::
CCDS43 ALALRWEAGIYANQEEEDNE
930 940
>>CCDS48003.1 AKAP2 gene_id:11217|Hs108|chr9 (859 aa)
initn: 5457 init1: 5457 opt: 5457 Z-score: 3452.1 bits: 650.2 E(32554): 5.8e-186
Smith-Waterman score: 5623; 98.5% identity (98.5% similar) in 872 aa overlap (232-1103:1-859)
210 220 230 240 250 260
pF1KSD DDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAECKSVPGITSTPHPMDHPSAFY
::::::::::::::::::::::::::::::
CCDS48 MEIEVSVAECKSVPGITSTPHPMDHPSAFY
10 20 30
270 280 290 300 310 320
pF1KSD SPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCCDSAVDGTYNGTSSPEPGAVVLVGGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 SPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCCDSAVDGTYNGTSSPEPGAVVLVGGL
40 50 60 70 80 90
330 340 350 360 370 380
pF1KSD SPPVHEATQPEPTERTASRQAPPHIELSNSSPDPMAEAERTNGHSPSQPRDALGDSLQVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 SPPVHEATQPEPTERTASRQAPPHIELSNSSPDPMAEAERTNGHSPSQPRDALGDSLQVP
100 110 120 130 140 150
390 400 410 420 430 440
pF1KSD VSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKKPSKLFEDDEHEKEQYCIRKVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 VSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKKPSKLFEDDEHEKEQYCIRKVR
160 170 180 190 200 210
450 460 470 480 490 500
pF1KSD PSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKTIEEQLDEEHLESHKKYKERKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 PSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKTIEEQLDEEHLESHKKYKERKE
220 230 240 250 260 270
510 520 530 540 550 560
pF1KSD RRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMIDKAKEDIVTEQIDFSAARKQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 RRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMIDKAKEDIVTEQIDFSAARKQF
280 290 300 310 320 330
570 580 590 600 610 620
pF1KSD QLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLTNPRPPSVGGPPEDSGASAAKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 QLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLTNPRPPSVGGPPEDSGASAAKG
340 350 360 370 380 390
630 640 650 660 670 680
pF1KSD QKSPGALETPSAAGSQGNTASQGKEGPYSEPSKRGPLSKLWAEDGEFTSARAVLTVVKDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 QKSPGALETPSAAGSQGNTASQGKEGPYSEPSKRGPLSKLWAEDGEFTSARAVLTVVKDD
400 410 420 430 440 450
690 700 710 720 730 740
pF1KSD DHGILDQFSRSVNVSLTQEELDSGLDELSVRSQDTTVLETLSNDFSMDNISDSGASNETT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 DHGILDQFSRSVNVSLTQEELDSGLDELSVRSQDTTVLETLSNDFSMDNISDSGASNETT
460 470 480 490 500 510
750 760 770 780 790 800
pF1KSD NALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFSDHGFYSPSSTLGDSPLVDDPLEYQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 NALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFSDHGFYSPSSTLGDSPLVDDPLEYQA
520 530 540 550 560 570
810 820 830 840 850 860
pF1KSD GLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 GLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVS
580 590 600 610 620 630
870 880 890 900 910 920
pF1KSD SPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPINMEETRPEGSYFSKYSEAAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 SPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPINMEETRPEGSYFSKYSEAAEL
640 650 660 670 680 690
930 940 950 960 970 980
pF1KSD RSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAAQEREEELKRQRQVLQSTQSPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 RSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAAQEREEELKRQRQVLQSTQSPR
700 710 720 730 740 750
990 1000 1010 1020 1030 1040
pF1KSD TKNAPSLPSRTCYKTAPGKIEKVKPPPSPTTEGPSLQPDLAPEEAAGTQRPKNLMQTLME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 TKNAPSLPSRTCYKTAPGKIEKVKPPPSPTTEGPSLQPDLAPEEAAGTQRPKNLMQTLME
760 770 780 790 800 810
1050 1060 1070 1080 1090 1100
pF1KSD DYETHKSKRRERMDDSSYTSKLLSCKVTSEVLEATRVNRRKSALALRWEAGIYANQEEED
::::::::::::::::: ::::::::::::::::::::::::::::::
CCDS48 DYETHKSKRRERMDDSS-------------VLEATRVNRRKSALALRWEAGIYANQEEED
820 830 840 850
pF1KSD NE
::
CCDS48 NE
>>CCDS48002.2 PALM2 gene_id:114299|Hs108|chr9 (411 aa)
initn: 1078 init1: 1047 opt: 1071 Z-score: 691.5 bits: 138.3 E(32554): 3.4e-32
Smith-Waterman score: 1071; 73.6% identity (85.2% similar) in 250 aa overlap (1-246:1-247)
10 20 30 40 50 60
pF1KSD MAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 MAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EEEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 EEEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFK
70 80 90 100 110 120
130 140 150 160 170
pF1KSD DFQKGFSSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKE----
:::::::::::::::::::::::::::::::::::::::::::::.: .. ...
CCDS48 DFQKGFSSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAAVYAMEINVEKDKQT
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD GESASNATETSGPDMTIKKPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEV
::. .: : ::. . .: .. .: . : . ..:..: .. .:: :..: .
CCDS48 GETKILSTSTIGPEGVHQKGVKVYDDGTKVVYEVRS-GGTVVENGVHKLST--KDVEELI
190 200 210 220 230
240 250 260 270 280 290
pF1KSD SVAECKSVPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDVAREIRYLDEVLEANCC
. : .:. :
CCDS48 QKAGQSSLGGGHVSERTVIADGSLSHPKEHMLCKEAKLEMVHKSRKDHSSGNPGQQAQAP
240 250 260 270 280 290
>>CCDS35099.1 PALM2 gene_id:114299|Hs108|chr9 (379 aa)
initn: 846 init1: 815 opt: 815 Z-score: 530.6 bits: 108.4 E(32554): 3.1e-23
Smith-Waterman score: 851; 48.5% identity (65.5% similar) in 365 aa overlap (1-343:3-365)
10 20 30 40 50
pF1KSD MAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MEMAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KSD TAEEEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 TAEEEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KSD FKDFQKGFSSTDGDA----VNY-ISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVL
::::::::::::: . .: ..: . :: . : : .. .. : . :
CCDS35 FKDFQKGFSSTDGAVYAMEINVEKDKQTGETKILSTSTIGPEGVHQKGVKVYDDGTKVVY
130 140 150 160 170 180
180 190 200 210 220
pF1KSD -LKEG----ESASNATETSGPDMTIKKPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPD
.. : :.. . :. . :.: : : .. . ...: .: : .
CCDS35 EVRSGGTVVENGVHKLSTKDVEELIQKAGQSSLGGGHVSERTVIADGSLSHPKEHMLCKE
190 200 210 220 230 240
230 240 250 260 270 280
pF1KSD HKNMEIEVSVAECKS-VPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDVAREIRYL
: .. : . .: :: . : : . : . .. ... :.. ....
CCDS35 AKLEMVHKSRKDHSSGNPGQQAQAPSAAGPEANLDQPVTMIFMGYQNIEDEEETKKVLGY
250 260 270 280 290 300
290 300 310 320 330
pF1KSD DEVLEANCC-------DSAVDGTYNGTSSPEPGAVVLVGGLSPPVHEATQPE-PT---ER
::...:. : . : . .:. . .:. ::.: :: ..:.: : :
CCDS35 DETIKAELVLIDEDDEKSLREKTVTDVSTIDGNAAELVSGR--PVSDTTEPSSPEGKEES
310 320 330 340 350
340 350 360 370 380 390
pF1KSD TASRQAPPHIELSNSSPDPMAEAERTNGHSPSQPRDALGDSLQVPVSPSSTTSSRCSSRD
:.. ::
CCDS35 LATEPAPGTQKKKRCQCCVVM
360 370
1103 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:12:13 2016 done: Thu Nov 3 04:12:13 2016
Total Scan time: 4.120 Total Display time: 0.170
Function used was FASTA [36.3.4 Apr, 2011]