Result of FASTA (omim) for
pF1KSDA0948
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0948, 521 aa
1>>>pF1KSDA0948 521 - 521 aa - 521 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4856+/-0.000327; mu= 18.4745+/- 0.021
mean_var=82.1642+/-15.870, 0's: 0 Z-trim(116.6): 17 B-trim: 47 in 2/54
Lambda= 0.141492
statistics sampled from 27801 (27817) to 27801 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.69), E-opt: 0.2 (0.326), width: 16
Scan time: 9.830
The best scores are: opt bits E(85289)
NP_112162 (OMIM: 611325) protein TBRG4 isoform 2 [ ( 521) 3434 710.7 2.6e-204
NP_954573 (OMIM: 611325) protein TBRG4 isoform 2 [ ( 521) 3434 710.7 2.6e-204
NP_004740 (OMIM: 611325) protein TBRG4 isoform 1 [ ( 631) 1873 392.1 2.6e-108
NP_001248763 (OMIM: 611325) protein TBRG4 isoform ( 642) 1873 392.1 2.6e-108
XP_011514063 (OMIM: 606965) PREDICTED: fas-activat ( 494) 267 64.2 1e-09
XP_011514064 (OMIM: 606965) PREDICTED: fas-activat ( 462) 236 57.9 7.9e-08
XP_016867194 (OMIM: 606965) PREDICTED: fas-activat ( 353) 207 51.9 3.9e-06
>>NP_112162 (OMIM: 611325) protein TBRG4 isoform 2 [Homo (521 aa)
initn: 3434 init1: 3434 opt: 3434 Z-score: 3788.9 bits: 710.7 E(85289): 2.6e-204
Smith-Waterman score: 3434; 100.0% identity (100.0% similar) in 521 aa overlap (1-521:1-521)
10 20 30 40 50 60
pF1KSD MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 RLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD DLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 DLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD PLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 PLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD DGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 DGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIV
430 440 450 460 470 480
490 500 510 520
pF1KSD AAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
:::::::::::::::::::::::::::::::::::::::::
NP_112 AAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
490 500 510 520
>>NP_954573 (OMIM: 611325) protein TBRG4 isoform 2 [Homo (521 aa)
initn: 3434 init1: 3434 opt: 3434 Z-score: 3788.9 bits: 710.7 E(85289): 2.6e-204
Smith-Waterman score: 3434; 100.0% identity (100.0% similar) in 521 aa overlap (1-521:1-521)
10 20 30 40 50 60
pF1KSD MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 RLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD DLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 DLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD PLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 PLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD DGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 DGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIV
430 440 450 460 470 480
490 500 510 520
pF1KSD AAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
:::::::::::::::::::::::::::::::::::::::::
NP_954 AAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
490 500 510 520
>>NP_004740 (OMIM: 611325) protein TBRG4 isoform 1 [Homo (631 aa)
initn: 1846 init1: 1846 opt: 1873 Z-score: 2065.7 bits: 392.1 E(85289): 2.6e-108
Smith-Waterman score: 2693; 80.1% identity (80.1% similar) in 553 aa overlap (79-521:79-631)
50 60 70 80 90 100
pF1KSD HLPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLS
::::::::::::::::::::::::::::::
NP_004 HLPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLS
50 60 70 80 90 100
110 120 130 140 150 160
pF1KSD HLLSEKPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 HLLSEKPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSV
110 120 130 140 150 160
170 180 190 200 210 220
pF1KSD EQEVRWRMRKLKYKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EQEVRWRMRKLKYKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVM
170 180 190 200 210 220
230 240
pF1KSD MKVGHLSEPLMNRLEDK-------------------------------------------
:::::::::::::::::
NP_004 MKVGHLSEPLMNRLEDKCLELVEHFGPNELRKVLVMLAAQSRRSVPLLRAISYHLVQKPF
230 240 250 260 270 280
pF1KSD ------------------------------------------------------------
NP_004 SLTKDVLLDVAYAYGKLSFHQTQVSQRLATDLLSLMPSLTSGEVAHCAKSFALLKWLSLP
290 300 310 320 330 340
250 260 270 280 290
pF1KSD -------HVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPAL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LFEAFAQHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPAL
350 360 370 380 390 400
300 310 320 330 340 350
pF1KSD QVDLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QVDLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEY
410 420 430 440 450 460
360 370 380 390 400 410
pF1KSD SGPLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SGPLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLL
470 480 490 500 510 520
420 430 440 450 460 470
pF1KSD DSDGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DSDGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRH
530 540 550 560 570 580
480 490 500 510 520
pF1KSD IVAAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
:::::::::::::::::::::::::::::::::::::::::::
NP_004 IVAAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
590 600 610 620 630
>--
initn: 511 init1: 511 opt: 511 Z-score: 563.1 bits: 114.1 E(85289): 1.3e-24
Smith-Waterman score: 511; 100.0% identity (100.0% similar) in 78 aa overlap (1-78:1-78)
10 20 30 40 50 60
pF1KSD MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL
::::::::::::::::::
NP_004 ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL
70 80 90 100 110 120
>>NP_001248763 (OMIM: 611325) protein TBRG4 isoform 3 [H (642 aa)
initn: 1846 init1: 1846 opt: 1873 Z-score: 2065.5 bits: 392.1 E(85289): 2.6e-108
Smith-Waterman score: 2693; 80.1% identity (80.1% similar) in 553 aa overlap (79-521:90-642)
50 60 70 80 90 100
pF1KSD HLPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLS
::::::::::::::::::::::::::::::
NP_001 HLPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLS
60 70 80 90 100 110
110 120 130 140 150 160
pF1KSD HLLSEKPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLLSEKPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KSD EQEVRWRMRKLKYKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQEVRWRMRKLKYKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVM
180 190 200 210 220 230
230 240
pF1KSD MKVGHLSEPLMNRLEDK-------------------------------------------
:::::::::::::::::
NP_001 MKVGHLSEPLMNRLEDKCLELVEHFGPNELRKVLVMLAAQSRRSVPLLRAISYHLVQKPF
240 250 260 270 280 290
pF1KSD ------------------------------------------------------------
NP_001 SLTKDVLLDVAYAYGKLSFHQTQVSQRLATDLLSLMPSLTSGEVAHCAKSFALLKWLSLP
300 310 320 330 340 350
250 260 270 280 290
pF1KSD -------HVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPAL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFEAFAQHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPAL
360 370 380 390 400 410
300 310 320 330 340 350
pF1KSD QVDLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QVDLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEY
420 430 440 450 460 470
360 370 380 390 400 410
pF1KSD SGPLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGPLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLL
480 490 500 510 520 530
420 430 440 450 460 470
pF1KSD DSDGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSDGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRH
540 550 560 570 580 590
480 490 500 510 520
pF1KSD IVAAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
:::::::::::::::::::::::::::::::::::::::::::
NP_001 IVAAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
600 610 620 630 640
>--
initn: 511 init1: 511 opt: 511 Z-score: 563.0 bits: 114.1 E(85289): 1.3e-24
Smith-Waterman score: 511; 100.0% identity (100.0% similar) in 78 aa overlap (1-78:12-89)
10 20 30 40
pF1KSD MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISH
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEVSGGARCDIMAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISH
10 20 30 40 50 60
50 60 70 80 90 100
pF1KSD LPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSH
:::::::::::::::::::::::::::::
NP_001 LPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSH
70 80 90 100 110 120
>>XP_011514063 (OMIM: 606965) PREDICTED: fas-activated s (494 aa)
initn: 55 init1: 55 opt: 267 Z-score: 295.4 bits: 64.2 E(85289): 1e-09
Smith-Waterman score: 267; 25.9% identity (53.6% similar) in 390 aa overlap (72-447:85-462)
50 60 70 80 90 100
pF1KSD SATSPISHLPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHD-LDSNQA
...:...: : :::. :: . . . ...
XP_011 IPPVQPCCLGPSKWGDRPVGGGPSAGPVQGLQRLLEQAKSPGELLRWLGQNPSKVRAHHY
60 70 80 90 100 110
110 120 130 140 150 160
pF1KSD AMVLIRLSHLLSEKPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPK
...: ::..::. .:. .... ...: :. . : :. : ::.:.
XP_011 SVALRRLGQLLGSRPRPPP--VEQVTLQDLSQLIIRNCPSFDIHTIHVCLHLAVLLGFPS
120 130 140 150 160 170
170 180 190 200 210
pF1KSD ASKELQSVEQEVRWRMRKLKYKHLAFLAESCATLSQEQHSQELL----AELLTHLERRWT
. . ..::: : :. : : .. : ..: .:.. : .
XP_011 DGPLVCALEQERRLRLPPKPPPPLQPLLRGGQGLEAALSCPRFLRYPRQHLISSLAEARP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KSD EIEDSHTLVTVMMKVGH--LSEP-LMNRLEDKHVLNRAQDITLPHLCSVLLAFARLNFHP
: :..: . ..... : :: :.. . :....: .. . ...: :.:::. :
XP_011 EELTPHVMVLLAQHLARHRLREPQLLEAIAHFLVVQETQ-LSSKVVQKLVLPFGRLNYLP
240 250 260 270 280 290
280 290 300 310 320 330
pF1KSD DQEDQFFSLVHEKLGSELPGLEPALQVDLVWALCVLQQAREAELQAVLHPEFHIQFLGGK
:.::. ... :. : :. : :... .:: :. :. :. : : :....:
XP_011 -LEQQFMPCLERILARE-AGVAPLATVNILMSLCQLRCLPFRALHFVFSPGF-INYISGT
300 310 320 330 340
340 350 360 370 380
pF1KSD SQKDQNTFQKLLHINATAL-LEYPEYSGPLLPASA---VAPGPSALDR-KVTPLQKEL-Q
. .. : . ::. :: : : :: :: . : : :: . .:..
XP_011 PHA--LIVRRYLSLLDTAVELELPGYRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVA
350 360 370 380 390 400
390 400 410 420 430 440
pF1KSD ETLKGLLGSADKGSLEVATQYGWVLDAEVLLDSDGEFLPVRDFVAPHLAQPTGSQSPPPG
: :. ::: .: .... :. : . .:.: :::: : : : .: : :
XP_011 EGLRQLLGE-EKYRQDLTVPPGYCTDFLLCASSSGAVLPVRT-QDPFLPYPP--RSCPQG
410 420 430 440 450 460
450 460 470 480 490 500
pF1KSD SKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIVAAGFLIVDVPFYEWLELKSEWQKGAYL
XP_011 QAASSATTRDPAQSYPSRNWSPREACPSSRAT
470 480 490
>>XP_011514064 (OMIM: 606965) PREDICTED: fas-activated s (462 aa)
initn: 55 init1: 55 opt: 236 Z-score: 261.6 bits: 57.9 E(85289): 7.9e-08
Smith-Waterman score: 236; 25.1% identity (53.3% similar) in 390 aa overlap (72-447:85-457)
50 60 70 80 90 100
pF1KSD SATSPISHLPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHD-LDSNQA
...:...: : :::. :: . . . ...
XP_011 IPPVQPCCLGPSKWGDRPVGGGPSAGPVQGLQRLLEQAKSPGELLRWLGQNPSKVRAHHY
60 70 80 90 100 110
110 120 130 140 150 160
pF1KSD AMVLIRLSHLLSEKPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPK
...: ::..::. .:. .... ...: :. . : :. : ::.:.
XP_011 SVALRRLGQLLGSRPRPPP--VEQVTLQDLSQLIIRNCPSFDIHTIHVCLHLAVLLGFPS
120 130 140 150 160 170
170 180 190 200 210
pF1KSD ASKELQSVEQEVRWRMRKLKYKHLAFLAESCATLSQEQHSQELL----AELLTHLERRWT
. . ..::: : :. : : .. : ..: .:.. : .
XP_011 DGPLVCALEQERRLRLPPKPPPPLQPLLRGGQGLEAALSCPRFLRYPRQHLISSLAEARP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KSD EIEDSHTLVTVMMKVGH--LSEP-LMNRLEDKHVLNRAQDITLPHLCSVLLAFARLNFHP
: :..: . ..... : :: :.. . :....: .. . ...: :.:::. :
XP_011 EELTPHVMVLLAQHLARHRLREPQLLEAIAHFLVVQETQ-LSSKVVQKLVLPFGRLNYLP
240 250 260 270 280 290
280 290 300 310 320 330
pF1KSD DQEDQFFSLVHEKLGSELPGLEPALQVDLVWALCVLQQAREAELQAVLHPEFHIQFLGGK
:.::. ... :. : :. : :... .:: :. :. :. : : :....:
XP_011 -LEQQFMPCLERILARE-AGVAPLATVNILMSLCQLRCLPFRALHFVFSPGF-INYISGT
300 310 320 330 340
340 350 360 370 380
pF1KSD SQKDQNTFQKLLHINATAL-LEYPEYSGPLLPASA---VAPGPSALDR-KVTPLQKEL-Q
. .. : . ::. :: : : :: :: . : : :: . .:..
XP_011 PHA--LIVRRYLSLLDTAVELELPGYRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVA
350 360 370 380 390 400
390 400 410 420 430 440
pF1KSD ETLKGLLGSADKGSLEVATQYGWVLDAEVLLDSDGEFLPVRDFVAPHLAQPTGSQSPPPG
: :. ::: .: .... :. . : . : .: : :: : ...: ::
XP_011 EGLRQLLGE-EKYRQDLTVPPGYCT---ATLRGTG--VPERP--APAQELPE-AEAPGPG
410 420 430 440 450
450 460 470 480 490 500
pF1KSD SKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIVAAGFLIVDVPFYEWLELKSEWQKGAYL
XP_011 PALGA
460
>>XP_016867194 (OMIM: 606965) PREDICTED: fas-activated s (353 aa)
initn: 55 init1: 55 opt: 207 Z-score: 231.2 bits: 51.9 E(85289): 3.9e-06
Smith-Waterman score: 207; 26.5% identity (51.7% similar) in 302 aa overlap (159-447:30-321)
130 140 150 160 170 180
pF1KSD QLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLKYKHLAFLA
:. . . ..::: : :. : :
XP_016 MRRPRGEPGPRAPRPTEGATCAGPGESCFPSDGPLVCALEQERRLRLPPKPPPPLQPLL
10 20 30 40 50
190 200 210 220 230 240
pF1KSD ESCATLSQEQHSQELL----AELLTHLERRWTEIEDSHTLVTVMMKVGH--LSEP-LMNR
.. : ..: .:.. : . : :..: . ..... : :: :..
XP_016 RGGQGLEAALSCPRFLRYPRQHLISSLAEARPEELTPHVMVLLAQHLARHRLREPQLLEA
60 70 80 90 100 110
250 260 270 280 290 300
pF1KSD LEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQVD
. :....: .. . ...: :.:::. : :.::. ... :. : :. : :.
XP_016 IAHFLVVQETQ-LSSKVVQKLVLPFGRLNYLP-LEQQFMPCLERILARE-AGVAPLATVN
120 130 140 150 160 170
310 320 330 340 350 360
pF1KSD LVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATAL-LEYPEYSG
.. .:: :. :. :. : : :....: . .. : . ::. :: : : :
XP_016 ILMSLCQLRCLPFRALHFVFSPGF-INYISGTPHA--LIVRRYLSLLDTAVELELPGYRG
180 190 200 210 220 230
370 380 390 400 410
pF1KSD PLLPASA---VAPGPSALDR-KVTPLQKEL-QETLKGLLGSADKGSLEVATQYGWVLDAE
: :: . : : :: . .:.. : :. ::: .: .... :. :
XP_016 PRLPRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGE-EKYRQDLTVPPGYCTDFL
240 250 260 270 280 290
420 430 440 450 460 470
pF1KSD VLLDSDGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLA
. .:.: :::: : : : .: : :
XP_016 LCASSSGAVLPVRT-QDPFLPYPP--RSCPQGQAASSATTRDPAQSYPSRNWSPREACPS
300 310 320 330 340
480 490 500 510 520
pF1KSD RRHIVAAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
XP_016 SRAT
350
521 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:21:05 2016 done: Thu Nov 3 04:21:07 2016
Total Scan time: 9.830 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]