Result of FASTA (omim) for
pF1KSDA0976
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0976, 364 aa
1>>>pF1KSDA0976 364 - 364 aa - 364 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3611+/-0.000368; mu= 10.9105+/- 0.023
mean_var=88.1182+/-17.559, 0's: 0 Z-trim(115.1): 89 B-trim: 0 in 0/50
Lambda= 0.136629
statistics sampled from 25276 (25368) to 25276 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.297), width: 16
Scan time: 6.640
The best scores are: opt bits E(85289)
XP_016856175 (OMIM: 608818) PREDICTED: netrin-G1 i ( 364) 2570 516.6 3.4e-146
XP_016856174 (OMIM: 608818) PREDICTED: netrin-G1 i ( 438) 2561 514.9 1.4e-145
XP_006710519 (OMIM: 608818) PREDICTED: netrin-G1 i ( 438) 2561 514.9 1.4e-145
NP_055732 (OMIM: 608818) netrin-G1 isoform G1c pre ( 438) 2561 514.9 1.4e-145
XP_011539327 (OMIM: 608818) PREDICTED: netrin-G1 i ( 388) 2560 514.7 1.4e-145
NP_001317594 (OMIM: 608818) netrin-G1 isoform 5 pr ( 460) 2560 514.7 1.6e-145
XP_016856173 (OMIM: 608818) PREDICTED: netrin-G1 i ( 480) 2560 514.7 1.7e-145
NP_001106699 (OMIM: 608818) netrin-G1 isoform G1d ( 480) 2560 514.7 1.7e-145
XP_016856172 (OMIM: 608818) PREDICTED: netrin-G1 i ( 480) 2560 514.7 1.7e-145
XP_006710518 (OMIM: 608818) PREDICTED: netrin-G1 i ( 480) 2560 514.7 1.7e-145
NP_001299617 (OMIM: 608818) netrin-G1 isoform G1n ( 505) 2560 514.7 1.8e-145
XP_011539323 (OMIM: 608818) PREDICTED: netrin-G1 i ( 539) 2560 514.7 1.9e-145
XP_016856169 (OMIM: 608818) PREDICTED: netrin-G1 i ( 539) 2560 514.7 1.9e-145
NP_001106697 (OMIM: 608818) netrin-G1 isoform G1a ( 539) 2560 514.7 1.9e-145
XP_016856170 (OMIM: 608818) PREDICTED: netrin-G1 i ( 539) 2560 514.7 1.9e-145
XP_016856171 (OMIM: 608818) PREDICTED: netrin-G1 i ( 483) 2559 514.5 2e-145
XP_011523959 (OMIM: 150320,615960) PREDICTED: lami (2489) 432 95.6 1.3e-18
XP_006723861 (OMIM: 601033) PREDICTED: laminin sub (2300) 431 95.4 1.4e-18
NP_005550 (OMIM: 150320,615960) laminin subunit al (3075) 432 95.6 1.6e-18
XP_011523957 (OMIM: 150320,615960) PREDICTED: lami (3085) 432 95.6 1.6e-18
XP_011527121 (OMIM: 601033) PREDICTED: laminin sub (3609) 431 95.4 2.1e-18
XP_011527120 (OMIM: 601033) PREDICTED: laminin sub (3654) 431 95.4 2.1e-18
NP_005551 (OMIM: 601033) laminin subunit alpha-5 p (3695) 431 95.4 2.1e-18
XP_006723859 (OMIM: 601033) PREDICTED: laminin sub (3700) 431 95.4 2.1e-18
XP_016866342 (OMIM: 156225,607855) PREDICTED: lami (1916) 425 94.1 2.7e-18
NP_001073291 (OMIM: 156225,607855) laminin subunit (3118) 425 94.2 4.2e-18
NP_000417 (OMIM: 156225,607855) laminin subunit al (3122) 425 94.2 4.2e-18
XP_005267039 (OMIM: 156225,607855) PREDICTED: lami (3206) 425 94.2 4.3e-18
XP_011534122 (OMIM: 156225,607855) PREDICTED: lami (3208) 425 94.2 4.3e-18
XP_005267038 (OMIM: 156225,607855) PREDICTED: lami (3210) 425 94.2 4.3e-18
XP_016866340 (OMIM: 156225,607855) PREDICTED: lami (3212) 425 94.2 4.3e-18
NP_001289925 (OMIM: 226650,226700,245660,600805) l ( 488) 402 89.3 1.9e-17
XP_011524284 (OMIM: 226650,226700,245660,600805) P (3243) 402 89.7 1e-16
NP_001121189 (OMIM: 226650,226700,245660,600805) l (3277) 402 89.7 1e-16
XP_011524283 (OMIM: 226650,226700,245660,600805) P (3298) 402 89.7 1e-16
NP_937762 (OMIM: 226650,226700,245660,600805) lami (3333) 402 89.7 1e-16
XP_011524282 (OMIM: 226650,226700,245660,600805) P (3336) 402 89.7 1e-16
XP_011524281 (OMIM: 226650,226700,245660,600805) P (3339) 402 89.7 1e-16
XP_011524280 (OMIM: 226650,226700,245660,600805) P (3342) 402 89.7 1e-16
NP_001316629 (OMIM: 610401) netrin-4 isoform 2 pre ( 605) 345 78.2 5.6e-14
NP_067052 (OMIM: 610401) netrin-4 isoform 1 precur ( 628) 345 78.2 5.8e-14
NP_001316630 (OMIM: 610401) netrin-4 isoform 3 [Ho ( 591) 336 76.4 1.9e-13
NP_001316631 (OMIM: 610401) netrin-4 isoform 3 [Ho ( 591) 336 76.4 1.9e-13
NP_004813 (OMIM: 601614) netrin-1 precursor [Homo ( 604) 318 72.8 2.2e-12
XP_006721658 (OMIM: 601614) PREDICTED: netrin-1 is ( 604) 318 72.8 2.2e-12
NP_006172 (OMIM: 602349) netrin-3 precursor [Homo ( 580) 314 72.0 3.7e-12
NP_001304977 (OMIM: 616380) laminin subunit beta-4 ( 772) 302 69.7 2.5e-11
NP_001304976 (OMIM: 616380) laminin subunit beta-4 (1101) 302 69.8 3.3e-11
XP_011514282 (OMIM: 616380) PREDICTED: laminin sub (1564) 302 69.9 4.5e-11
XP_016867369 (OMIM: 616380) PREDICTED: laminin sub (1567) 302 69.9 4.6e-11
>>XP_016856175 (OMIM: 608818) PREDICTED: netrin-G1 isofo (364 aa)
initn: 2570 init1: 2570 opt: 2570 Z-score: 2745.7 bits: 516.6 E(85289): 3.4e-146
Smith-Waterman score: 2570; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KSD MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
310 320 330 340 350 360
pF1KSD IGSK
::::
XP_016 IGSK
>>XP_016856174 (OMIM: 608818) PREDICTED: netrin-G1 isofo (438 aa)
initn: 2587 init1: 2561 opt: 2561 Z-score: 2734.8 bits: 514.9 E(85289): 1.4e-145
Smith-Waterman score: 2561; 99.7% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KSD MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
310 320 330 340 350 360
pF1KSD IGSK
::.
XP_016 IGTNVCDNELLHCQNGGTCHNNVRCLCPAAYTGILCEKLRCEEAGSCGSDSGQGAPPHGS
370 380 390 400 410 420
>>XP_006710519 (OMIM: 608818) PREDICTED: netrin-G1 isofo (438 aa)
initn: 2587 init1: 2561 opt: 2561 Z-score: 2734.8 bits: 514.9 E(85289): 1.4e-145
Smith-Waterman score: 2561; 99.7% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KSD MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
310 320 330 340 350 360
pF1KSD IGSK
::.
XP_006 IGTNVCDNELLHCQNGGTCHNNVRCLCPAAYTGILCEKLRCEEAGSCGSDSGQGAPPHGS
370 380 390 400 410 420
>>NP_055732 (OMIM: 608818) netrin-G1 isoform G1c precurs (438 aa)
initn: 2587 init1: 2561 opt: 2561 Z-score: 2734.8 bits: 514.9 E(85289): 1.4e-145
Smith-Waterman score: 2561; 99.7% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KSD MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
310 320 330 340 350 360
pF1KSD IGSK
::.
NP_055 IGTNVCDNELLHCQNGGTCHNNVRCLCPAAYTGILCEKLRCEEAGSCGSDSGQGAPPHGS
370 380 390 400 410 420
>>XP_011539327 (OMIM: 608818) PREDICTED: netrin-G1 isofo (388 aa)
initn: 2586 init1: 2560 opt: 2560 Z-score: 2734.6 bits: 514.7 E(85289): 1.4e-145
Smith-Waterman score: 2560; 99.7% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KSD MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
310 320 330 340 350 360
pF1KSD IGSK
::.
XP_011 IGNPPKFNRIWPNISSLEVSNPKQGRSM
370 380
>>NP_001317594 (OMIM: 608818) netrin-G1 isoform 5 precur (460 aa)
initn: 2586 init1: 2560 opt: 2560 Z-score: 2733.4 bits: 514.7 E(85289): 1.6e-145
Smith-Waterman score: 2560; 99.7% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KSD MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
310 320 330 340 350 360
pF1KSD IGSK
::.
NP_001 IGNPPKFNRIWPNISSLEVSNPKQANVCDNELLHCQNGGTCHNNVRCLCPAAYTGILCEK
370 380 390 400 410 420
>>XP_016856173 (OMIM: 608818) PREDICTED: netrin-G1 isofo (480 aa)
initn: 2586 init1: 2560 opt: 2560 Z-score: 2733.1 bits: 514.7 E(85289): 1.7e-145
Smith-Waterman score: 2560; 99.7% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KSD MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
310 320 330 340 350 360
pF1KSD IGSK
::.
XP_016 IGNPPKFNRIWPNISSLEVSNPKQVAPKLALSTVSSVQVANHKRANVCDNELLHCQNGGT
370 380 390 400 410 420
>>NP_001106699 (OMIM: 608818) netrin-G1 isoform G1d prec (480 aa)
initn: 2586 init1: 2560 opt: 2560 Z-score: 2733.1 bits: 514.7 E(85289): 1.7e-145
Smith-Waterman score: 2560; 99.7% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KSD MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
310 320 330 340 350 360
pF1KSD IGSK
::.
NP_001 IGNPPKFNRIWPNISSLEVSNPKQVAPKLALSTVSSVQVANHKRANVCDNELLHCQNGGT
370 380 390 400 410 420
>>XP_016856172 (OMIM: 608818) PREDICTED: netrin-G1 isofo (480 aa)
initn: 2586 init1: 2560 opt: 2560 Z-score: 2733.1 bits: 514.7 E(85289): 1.7e-145
Smith-Waterman score: 2560; 99.7% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KSD MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
310 320 330 340 350 360
pF1KSD IGSK
::.
XP_016 IGNPPKFNRIWPNISSLEVSNPKQVAPKLALSTVSSVQVANHKRANVCDNELLHCQNGGT
370 380 390 400 410 420
>>XP_006710518 (OMIM: 608818) PREDICTED: netrin-G1 isofo (480 aa)
initn: 2586 init1: 2560 opt: 2560 Z-score: 2733.1 bits: 514.7 E(85289): 1.7e-145
Smith-Waterman score: 2560; 99.7% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KSD MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MYLSRFLSIHALWVTVSSVMQPYPLVWGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISS
310 320 330 340 350 360
pF1KSD IGSK
::.
XP_006 IGNPPKFNRIWPNISSLEVSNPKQVAPKLALSTVSSVQVANHKRANVCDNELLHCQNGGT
370 380 390 400 410 420
364 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:30:21 2016 done: Thu Nov 3 04:30:22 2016
Total Scan time: 6.640 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]