Result of FASTA (ccds) for
pF1KSDA0992
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0992, 672 aa
1>>>pF1KSDA0992 672 - 672 aa - 672 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 14.9143+/-0.00133; mu= -22.6029+/- 0.081
mean_var=652.3635+/-133.437, 0's: 0 Z-trim(115.9): 55 B-trim: 0 in 0/51
Lambda= 0.050215
statistics sampled from 16484 (16530) to 16484 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.78), E-opt: 0.2 (0.508), width: 16
Scan time: 3.700
The best scores are: opt bits E(32554)
CCDS54820.1 PALLD gene_id:23022|Hs108|chr4 ( 672) 4603 348.7 1.6e-95
CCDS54819.1 PALLD gene_id:23022|Hs108|chr4 ( 777) 3423 263.2 9.8e-70
CCDS34098.1 PALLD gene_id:23022|Hs108|chr4 (1106) 3059 237.0 1.1e-61
CCDS54818.1 PALLD gene_id:23022|Hs108|chr4 (1123) 2589 202.9 2e-51
CCDS73142.1 MYPN gene_id:84665|Hs108|chr10 (1026) 1876 151.3 6.6e-36
CCDS7275.1 MYPN gene_id:84665|Hs108|chr10 (1320) 1876 151.3 7.9e-36
CCDS75309.1 MYOT gene_id:9499|Hs108|chr5 ( 383) 961 84.6 2.8e-16
CCDS47268.1 MYOT gene_id:9499|Hs108|chr5 ( 314) 958 84.3 2.8e-16
CCDS4194.1 MYOT gene_id:9499|Hs108|chr5 ( 498) 961 84.7 3.4e-16
>>CCDS54820.1 PALLD gene_id:23022|Hs108|chr4 (672 aa)
initn: 4603 init1: 4603 opt: 4603 Z-score: 1828.3 bits: 348.7 E(32554): 1.6e-95
Smith-Waterman score: 4603; 99.9% identity (100.0% similar) in 672 aa overlap (1-672:1-672)
10 20 30 40 50 60
pF1KSD MSALASRSAPAMQSSGSFNYARPKQFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MSALASRSAPAMQSSGSFNYARPKQFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPRQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FGRAPVPPFAQPFGAEPEAPWGSSSPSPPPPPPPVFSPTAAFPVPDVFPLPPPPPPLPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FGRAPVPPFAQPFGAEPEAPWGSSSPSPPPPPPPVFSPTAAFPVPDVFPLPPPPPPLPSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GQASHCSSPATRFGHGQTPAAFLSALLPSQPPPAAVNALGLPKGVTPAGFPKKASRTARI
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GQASHCSSPATRFGHSQTPAAFLSALLPSQPPPAAVNALGLPKGVTPAGFPKKASRTARI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ASDEEIQGTKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATVFNIQEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ASDEEIQGTKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATVFNIQEPE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD EETANQEYKVSSCEQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EETANQEYKVSSCEQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD IFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD NYTIMAANPQGRISCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NYTIMAANPQGRISCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQER
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD SLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD RLECRVLGVPPPQIFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RLECRVLGVPPPQIFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD NEAGIVSCTARLDVYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NEAGIVSCTARLDVYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHL
610 620 630 640 650 660
670
pF1KSD TLNTALVESEDL
::::::::::::
CCDS54 TLNTALVESEDL
670
>>CCDS54819.1 PALLD gene_id:23022|Hs108|chr4 (777 aa)
initn: 3409 init1: 3409 opt: 3423 Z-score: 1365.4 bits: 263.2 E(32554): 9.8e-70
Smith-Waterman score: 3439; 93.5% identity (95.1% similar) in 555 aa overlap (118-672:233-777)
90 100 110 120 130 140
pF1KSD PPPPPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALL
:: : . .. :. :::..::
CCDS54 QQVNNPELGLSRAALQMQFNAAERETNGVHPSRGVNGLINGKANSNKSLPTPAVLLS---
210 220 230 240 250
150 160 170 180 190 200
pF1KSD PSQPPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
:.. :: :. :: :::::::::::::::::::::::::::::::::::::::
CCDS54 PTKEPPPL---LAKPK----LGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
260 270 280 290 300 310
210 220 230 240 250 260
pF1KSD LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLER
320 330 340 350 360 370
270 280 290 300 310 320
pF1KSD SPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG
380 390 400 410 420 430
330 340 350 360 370 380
pF1KSD KQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQR
440 450 460 470 480 490
390 400 410 420 430 440
pF1KSD GRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
500 510 520 530 540 550
450 460 470 480 490 500
pF1KSD SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS
560 570 580 590 600 610
510 520 530 540 550 560
pF1KSD FSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHST
620 630 640 650 660 670
570 580 590 600 610 620
pF1KSD DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKP
680 690 700 710 720 730
630 640 650 660 670
pF1KSD KKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
:::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
740 750 760 770
>>CCDS34098.1 PALLD gene_id:23022|Hs108|chr4 (1106 aa)
initn: 3695 init1: 3045 opt: 3059 Z-score: 1220.9 bits: 237.0 E(32554): 1.1e-61
Smith-Waterman score: 3075; 92.2% identity (94.2% similar) in 502 aa overlap (118-619:615-1106)
90 100 110 120 130 140
pF1KSD PPPPPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALL
:: : . .. :. :::..::
CCDS34 QQVNNPELGLSRAALQMQFNAAERETNGVHPSRGVNGLINGKANSNKSLPTPAVLLS---
590 600 610 620 630 640
150 160 170 180 190 200
pF1KSD PSQPPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
:.. :: :. :: :::::::::::::::::::::::::::::::::::::::
CCDS34 PTKEPPPL---LAKPK----LGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
650 660 670 680 690
210 220 230 240 250 260
pF1KSD LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLER
700 710 720 730 740 750
270 280 290 300 310 320
pF1KSD SPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG
760 770 780 790 800 810
330 340 350 360 370 380
pF1KSD KQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQR
820 830 840 850 860 870
390 400 410 420 430 440
pF1KSD GRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
880 890 900 910 920 930
450 460 470 480 490 500
pF1KSD SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS
940 950 960 970 980 990
510 520 530 540 550 560
pF1KSD FSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 FSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHST
1000 1010 1020 1030 1040 1050
570 580 590 600 610 620
pF1KSD DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKP
:::::::::::::::::::::::::::::::::::::::::::::::: . :
CCDS34 DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYISRH
1060 1070 1080 1090 1100
630 640 650 660 670
pF1KSD KKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
>>CCDS54818.1 PALLD gene_id:23022|Hs108|chr4 (1123 aa)
initn: 3273 init1: 2550 opt: 2589 Z-score: 1036.8 bits: 202.9 E(32554): 2e-51
Smith-Waterman score: 3031; 89.2% identity (91.1% similar) in 519 aa overlap (118-619:615-1123)
90 100 110 120 130 140
pF1KSD PPPPPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALL
:: : . .. :. :::..::
CCDS54 QQVNNPELGLSRAALQMQFNAAERETNGVHPSRGVNGLINGKANSNKSLPTPAVLLS---
590 600 610 620 630 640
150 160 170 180 190 200
pF1KSD PSQPPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
:.. :: :. :: :::::::::::::::::::::::::::::::::::::::
CCDS54 PTKEPPPL---LAKPK----LGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
650 660 670 680 690
210 220 230 240 250
pF1KSD LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQ-----------------EYKV
::::::::::::::::::::::::::::::::::::::: ::::
CCDS54 LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQDIGSPHASVGSPLDGQKEYKV
700 710 720 730 740 750
260 270 280 290 300 310
pF1KSD SSCEQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SSCEQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFT
760 770 780 790 800 810
320 330 340 350 360 370
pF1KSD CRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 CRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQ
820 830 840 850 860 870
380 390 400 410 420 430
pF1KSD GRISCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GRISCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAP
880 890 900 910 920 930
440 450 460 470 480 490
pF1KSD GDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSR
940 950 960 970 980 990
500 510 520 530 540 550
pF1KSD DAGIYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DAGIYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVP
1000 1010 1020 1030 1040 1050
560 570 580 590 600 610
pF1KSD PPQIFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PPQIFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTA
1060 1070 1080 1090 1100 1110
620 630 640 650 660 670
pF1KSD RLDVYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESE
::::: . :
CCDS54 RLDVYISRH
1120
>>CCDS73142.1 MYPN gene_id:84665|Hs108|chr10 (1026 aa)
initn: 2189 init1: 1118 opt: 1876 Z-score: 758.1 bits: 151.3 E(32554): 6.6e-36
Smith-Waterman score: 2083; 49.1% identity (71.4% similar) in 690 aa overlap (1-672:398-1026)
10 20
pF1KSD MSALASRSAPAMQ---------SSGSFNYA
:..: : . ::. :: .:. :
CCDS73 QLQQLHNQVLLEQHQLQNPPPSSPKEFPFSMTVLNSNAPPAVTTSSKQVKAPSSQTFSLA
370 380 390 400 410 420
30 40 50 60 70
pF1KSD RPKQFIAAQNLGPASGHGTPASSP--SSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEA
::: :. . : :. .:.::: . :: :. .. : . . : .: ..
CCDS73 RPKYFFPSTNTTAATV--APSSSPVFTLSSTPQTIQRTVSKESLLVSHPSVQT-----KS
430 440 450 460 470 480
80 90 100 110 120 130
pF1KSD PWGSSSPSPPPPPPPVFSPTAAFPVPDVFPLPPPPPPLP---SPGQASHCSSPATRFGHG
: : : . : :: :. :: : : .: .: : :: .: :..:.
CCDS73 PGGLSIQNEPLPPGPT-EPT---PPPFTFSIPSGNQFQPRCVSPIPVS----PTSRI---
490 500 510 520
140 150 160 170 180 190
pF1KSD QTPAAFLSALLPSQPPPAAVNALGLPKGVT--PA-GFPKKASRTARIASDEEIQGTKDAV
:.:.::::..::: : .::.:::... :. :. :: ... . ..:..:. ::.::
CCDS73 QNPVAFLSSVLPSLPAIPPTNAMGLPRSAPSMPSQGLAKKNTKSPQPVNDDNIRETKNAV
530 540 550 560 570 580
200 210 220 230 240 250
pF1KSD IQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSC
:.:: .:. :. :. : .::::.::
CCDS73 IRDLGKKITFS-DVRPN----------------------------------QQEYKISSF
590 600 610
260 270 280 290 300 310
pF1KSD EQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRV
::::..:::.::::.::::: ::.:. ..:. . .::.:. .:::... :: ::::::..
CCDS73 EQRLMNEIEFRLERTPVDESDDEIQHDEIPTGKCIAPIFDKRLKHFRVTEGSPVTFTCKI
620 630 640 650 660 670
320 330 340 350 360 370
pF1KSD AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI
.: : ::.:::::::::: ...: ..:. ::::::: ..: :::::::::::::::::
CCDS73 VGIPVPKVYWFKDGKQISKRNEHCKMRREGDGTCSLHIESTTSDDDGNYTIMAANPQGRI
680 690 700 710 720 730
380 390 400 410 420 430
pF1KSD SCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDL
::.:.::::.. :.: . .:. : : : . ::. ::.:::::::::::::::.
CCDS73 SCSGHLMVQSLPIRSRL--TSAGQSHRGRSRVQERDK----EPLQERFFRPHFLQAPGDM
740 750 760 770 780
440 450 460 470 480 490
pF1KSD TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG
...::.:::.:::::::: :.:.: :.:.:: ::..:::::::.:::::.:.:.:.::::
CCDS73 VAHEGRLCRLDCKVSGLPPPELTWLLNGQPVLPDASHKMLVRETGVHSLLIDPLTQRDAG
790 800 810 820 830 840
500 510 520 530 540 550
pF1KSD IYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
: :::::..::::::::: :.:::..: ::..::::: :: .:.::::::::.:.:::
CCDS73 TYKCIATNKTGQNSFSLELSVVAKEVKKAPVILEKLQNCGVPEGHPVRLECRVIGMPPPV
850 860 870 880 890 900
560 570 580 590 600 610
pF1KSD IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLD
..:::.::.. . .:.:::::. :: ::::: : : ::::::.::::::::::::::::
CCDS73 FYWKKDNETIPCTRERISMHQDTTGYACLLIQPAKKSDAGWYTLSAKNEAGIVSCTARLD
910 920 930 940 950 960
620 630 640 650 660 670
pF1KSD VYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQP-EANPSHLTLNTALVESEDL
.:.:::.: : .::::.:::..:...:::: .::. :.. . . ..:::..:
CCDS73 IYAQWHHQIPP--PMSVRPSGSRYGSLTSKGLDIFSAFSSMESTMVYSCSSRSVVESDEL
970 980 990 1000 1010 1020
>>CCDS7275.1 MYPN gene_id:84665|Hs108|chr10 (1320 aa)
initn: 2313 init1: 1118 opt: 1876 Z-score: 756.7 bits: 151.3 E(32554): 7.9e-36
Smith-Waterman score: 2083; 49.1% identity (71.4% similar) in 690 aa overlap (1-672:692-1320)
10 20
pF1KSD MSALASRSAPAMQ---------SSGSFNYA
:..: : . ::. :: .:. :
CCDS72 QLQQLHNQVLLEQHQLQNPPPSSPKEFPFSMTVLNSNAPPAVTTSSKQVKAPSSQTFSLA
670 680 690 700 710 720
30 40 50 60 70
pF1KSD RPKQFIAAQNLGPASGHGTPASSP--SSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEA
::: :. . : :. .:.::: . :: :. .. : . . : .: ..
CCDS72 RPKYFFPSTNTTAATV--APSSSPVFTLSSTPQTIQRTVSKESLLVSHPSVQT-----KS
730 740 750 760 770
80 90 100 110 120 130
pF1KSD PWGSSSPSPPPPPPPVFSPTAAFPVPDVFPLPPPPPPLP---SPGQASHCSSPATRFGHG
: : : . : :: :. :: : : .: .: : :: .: :..:.
CCDS72 PGGLSIQNEPLPPGPT-EPT---PPPFTFSIPSGNQFQPRCVSPIPVS----PTSRI---
780 790 800 810 820
140 150 160 170 180 190
pF1KSD QTPAAFLSALLPSQPPPAAVNALGLPKGVT--PA-GFPKKASRTARIASDEEIQGTKDAV
:.:.::::..::: : .::.:::... :. :. :: ... . ..:..:. ::.::
CCDS72 QNPVAFLSSVLPSLPAIPPTNAMGLPRSAPSMPSQGLAKKNTKSPQPVNDDNIRETKNAV
830 840 850 860 870 880
200 210 220 230 240 250
pF1KSD IQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSC
:.:: .:. :. :. : .::::.::
CCDS72 IRDLGKKITFS-DVRPN----------------------------------QQEYKISSF
890 900
260 270 280 290 300 310
pF1KSD EQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRV
::::..:::.::::.::::: ::.:. ..:. . .::.:. .:::... :: ::::::..
CCDS72 EQRLMNEIEFRLERTPVDESDDEIQHDEIPTGKCIAPIFDKRLKHFRVTEGSPVTFTCKI
910 920 930 940 950 960
320 330 340 350 360 370
pF1KSD AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI
.: : ::.:::::::::: ...: ..:. ::::::: ..: :::::::::::::::::
CCDS72 VGIPVPKVYWFKDGKQISKRNEHCKMRREGDGTCSLHIESTTSDDDGNYTIMAANPQGRI
970 980 990 1000 1010 1020
380 390 400 410 420 430
pF1KSD SCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDL
::.:.::::.. :.: . .:. : : : . ::. ::.:::::::::::::::.
CCDS72 SCSGHLMVQSLPIRSRL--TSAGQSHRGRSRVQERDK----EPLQERFFRPHFLQAPGDM
1030 1040 1050 1060 1070 1080
440 450 460 470 480 490
pF1KSD TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG
...::.:::.:::::::: :.:.: :.:.:: ::..:::::::.:::::.:.:.:.::::
CCDS72 VAHEGRLCRLDCKVSGLPPPELTWLLNGQPVLPDASHKMLVRETGVHSLLIDPLTQRDAG
1090 1100 1110 1120 1130 1140
500 510 520 530 540 550
pF1KSD IYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
: :::::..::::::::: :.:::..: ::..::::: :: .:.::::::::.:.:::
CCDS72 TYKCIATNKTGQNSFSLELSVVAKEVKKAPVILEKLQNCGVPEGHPVRLECRVIGMPPPV
1150 1160 1170 1180 1190 1200
560 570 580 590 600 610
pF1KSD IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLD
..:::.::.. . .:.:::::. :: ::::: : : ::::::.::::::::::::::::
CCDS72 FYWKKDNETIPCTRERISMHQDTTGYACLLIQPAKKSDAGWYTLSAKNEAGIVSCTARLD
1210 1220 1230 1240 1250 1260
620 630 640 650 660 670
pF1KSD VYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQP-EANPSHLTLNTALVESEDL
.:.:::.: : .::::.:::..:...:::: .::. :.. . . ..:::..:
CCDS72 IYAQWHHQIPP--PMSVRPSGSRYGSLTSKGLDIFSAFSSMESTMVYSCSSRSVVESDEL
1270 1280 1290 1300 1310 1320
>>CCDS75309.1 MYOT gene_id:9499|Hs108|chr5 (383 aa)
initn: 1379 init1: 946 opt: 961 Z-score: 405.7 bits: 84.6 E(32554): 2.8e-16
Smith-Waterman score: 961; 41.5% identity (70.1% similar) in 381 aa overlap (304-672:11-383)
280 290 300 310 320 330
pF1KSD GDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGK-QISP
:.:.. ..: :: : : . : :
CCDS75 MDSNYQQSSAGQPINAKPSQTANAKP-IPRTPDHEIQGSK
10 20 30
340 350 360 370 380
pF1KSD KSDHYTIQRDLDGTCS---LHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQRGR
.. ..: : :. ::. . : . ... .::. . . :: .. :
CCDS75 EALIQDLERKLK--CKDTLLHNGNQRLTYEEKMARRLLGPQNAAA-----VFQAQDDSGA
40 50 60 70 80 90
390 400 410 420 430 440
pF1KSD --SPRSPSGHPHVRRP----RSRSRDSGDENEP--IQERFFRPHFLQAPGDLTVQEGKLC
: . : : ... : :::: . :: :. :::.:. :.:.:.: .....::..:
CCDS75 QDSQQHNSEHARLQVPTSQVRSRSTSRGDVNDQDAIQEKFYPPRFIQVPENMSIDEGRFC
100 110 120 130 140 150
450 460 470 480 490 500
pF1KSD RMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN
::: ::::::.::.:: :.:. :. :. :::.: :.:.::::.: : . ::: :.:.: :
CCDS75 RMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN
160 170 180 190 200 210
510 520 530 540 550 560
pF1KSD RAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENE
:::. .:...: : ::: .. :.:: : :. : .: :.:::.. ..:::..:::..::
CCDS75 RAGEATFTVQLDVLAKEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNE
220 230 240 250 260 270
570 580 590 600 610 620
pF1KSD SLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQ
. .:::.:..::: : . :::. ..:.::::::::: ::::...:..:::: .. .:
CCDS75 MVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQT
280 290 300 310 320 330
630 640 650 660 670
pF1KSD SQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
. : .:::. :.: ::. .::..: ::.::.. ..:. ...: :::.:
CCDS75 LPAPKQLRVRPTFSKYLALNGKGLNVKQAFNPEGEFQRLAAQSGLYESEEL
340 350 360 370 380
>>CCDS47268.1 MYOT gene_id:9499|Hs108|chr5 (314 aa)
initn: 1215 init1: 946 opt: 958 Z-score: 405.6 bits: 84.3 E(32554): 2.8e-16
Smith-Waterman score: 958; 47.2% identity (76.6% similar) in 299 aa overlap (382-672:16-314)
360 370 380 390 400
pF1KSD TASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQRGR--SPRSPSGHPHVRRP----RS
:: .. : : . : : ... : ::
CCDS47 MARRLLGPQNAAAVFQAQDDSGAQDSQQHNSEHARLQVPTSQVRS
10 20 30 40
410 420 430 440 450 460
pF1KSD RSRDSGDENEP--IQERFFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKP
:: . :: :. :::.:. :.:.:.: .....::..:::: ::::::.::.:: :.:.
CCDS47 RSTSRGDVNDQDAIQEKFYPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRT
50 60 70 80 90 100
470 480 490 500 510 520
pF1KSD VRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKEAHKPP
:. :. :::.: :.:.::::.: : . ::: :.:.: ::::. .:...: : ::: .. :
CCDS47 VQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAKEHKRAP
110 120 130 140 150 160
530 540 550 560 570 580
pF1KSD VFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHSTDRVSMHQDNHGYICLL
.:: : :. : .: :.:::.. ..:::..:::..:: . .:::.:..::: : . ::
CCDS47 MFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLL
170 180 190 200 210 220
590 600 610 620 630 640
pF1KSD IQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKPKKVRPSASRYAALSDQ
:. ..:.::::::::: ::::...:..:::: .. .: . : .:::. :.: ::. .
CCDS47 IKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQTLPAPKQLRVRPTFSKYLALNGK
230 240 250 260 270 280
650 660 670
pF1KSD GLDIKAAFQPEANPSHLTLNTALVESEDL
::..: ::.::.. ..:. ...: :::.:
CCDS47 GLNVKQAFNPEGEFQRLAAQSGLYESEEL
290 300 310
>>CCDS4194.1 MYOT gene_id:9499|Hs108|chr5 (498 aa)
initn: 1474 init1: 946 opt: 961 Z-score: 404.1 bits: 84.7 E(32554): 3.4e-16
Smith-Waterman score: 1038; 34.8% identity (55.3% similar) in 673 aa overlap (18-672:2-498)
10 20 30 40 50
pF1KSD MSALASRSAPAMQSSGSFNYARPKQFIAAQNLGPASGH----GTPASSPSSSSLPSPMSP
::: :::.:: .:: : ... : .:: ::.. : .
CCDS41 MFNYERPKHFIQSQN--PCGSRLQPPGPETSSFSSQTKQSSIII
10 20 30 40
60 70 80 90 100 110
pF1KSD TPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPPPPPPVFSPTAAFPVPDVFPLPPPPPP
::: . : :.: ::. : . ..:::. :
CCDS41 QPRQCTE-------QRFSA-------SSTLSS-----HITMSSSAFPAS------PQQHA
50 60 70
120 130 140 150 160 170
pF1KSD LPSPGQASHCSSPATRFGHGQTPAAFLSALLPSQPPPAAVNALGLPKGV------TPAGF
.::: . ..:.::.:::..::::: :. .:... . ::
CCDS41 GSNPGQRVTTT-------YNQSPASFLSSILPSQPD---YNSSKIPSAMDSNYQQSSAGQ
80 90 100 110 120
180 190 200 210 220
pF1KSD P--KKASRTARI-----ASDEEIQGTKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMAR
: : :.:: . :.::::.:.:.::::::::. :. ::.::. ::::::.:::
CCDS41 PINAKPSQTANAKPIPRTPDHEIQGSKEALIQDLERKLKCKDTLLHNGNQRLTYEEKMAR
130 140 150 160 170 180
230 240 250 260 270 280
pF1KSD RLLGA-DSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLERSPVDESGDEVQYGDV
:::: ..:.::. : :.:: .
CCDS41 RLLGPQNAAAVFQAQ---------------------------------DDSGAQ------
190 200
290 300 310 320 330 340
pF1KSD PVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRD
:..: .:.:
CCDS41 -------------------------------------------DSQQ--HNSEH------
210
350 360 370 380 390 400
pF1KSD LDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQRGRSPRSPSGHPHVRR
.::.: : : :
CCDS41 ----------------------------------ARLQV---------PTSQV------R
220
410 420 430 440 450 460
pF1KSD PRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGK
:: :: . .... :::.:. :.:.:.: .....::..:::: ::::::.::.:: :.:.
CCDS41 SRSTSRGDVNDQDAIQEKFYPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGR
230 240 250 260 270 280
470 480 490 500 510 520
pF1KSD PVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKEAHKP
:. :. :::.: :.:.::::.: : . ::: :.:.: ::::. .:...: : ::: ..
CCDS41 TVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAKEHKRA
290 300 310 320 330 340
530 540 550 560 570 580
pF1KSD PVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHSTDRVSMHQDNHGYICL
:.:: : :. : .: :.:::.. ..:::..:::..:: . .:::.:..::: : . :
CCDS41 PMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTL
350 360 370 380 390 400
590 600 610 620 630 640
pF1KSD LIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKPKKVRPSASRYAALSD
::. ..:.::::::::: ::::...:..:::: .. .: . : .:::. :.: ::.
CCDS41 LIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQTLPAPKQLRVRPTFSKYLALNG
410 420 430 440 450 460
650 660 670
pF1KSD QGLDIKAAFQPEANPSHLTLNTALVESEDL
.::..: ::.::.. ..:. ...: :::.:
CCDS41 KGLNVKQAFNPEGEFQRLAAQSGLYESEEL
470 480 490
672 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:34:22 2016 done: Thu Nov 3 04:34:23 2016
Total Scan time: 3.700 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]