Result of FASTA (omim) for
pF1KSDA0992
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0992, 672 aa
1>>>pF1KSDA0992 672 - 672 aa - 672 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 16.3611+/-0.000536; mu= -31.0693+/- 0.033
mean_var=753.6036+/-158.423, 0's: 0 Z-trim(124.1): 135 B-trim: 2090 in 1/56
Lambda= 0.046720
statistics sampled from 44989 (45163) to 44989 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.788), E-opt: 0.2 (0.53), width: 16
Scan time: 14.100
The best scores are: opt bits E(85289)
NP_001159582 (OMIM: 606856,608092) palladin isofor ( 672) 4603 325.7 3.5e-88
XP_011530071 (OMIM: 606856,608092) PREDICTED: pall (1451) 4603 326.0 6.2e-88
XP_016863399 (OMIM: 606856,608092) PREDICTED: pall (1398) 4239 301.4 1.5e-80
NP_001159581 (OMIM: 606856,608092) palladin isofor ( 777) 3423 246.2 3.4e-64
XP_011530076 (OMIM: 606856,608092) PREDICTED: pall (1227) 3423 246.4 4.8e-64
NP_057165 (OMIM: 606856,608092) palladin isoform 2 (1106) 3059 221.8 1.1e-56
XP_011530077 (OMIM: 606856,608092) PREDICTED: pall (1018) 3046 220.9 1.9e-56
XP_005262923 (OMIM: 606856,608092) PREDICTED: pall (1018) 3046 220.9 1.9e-56
XP_005262918 (OMIM: 606856,608092) PREDICTED: pall (1400) 3046 221.0 2.4e-56
XP_011530070 (OMIM: 606856,608092) PREDICTED: pall (1468) 3046 221.0 2.5e-56
XP_011530075 (OMIM: 606856,608092) PREDICTED: pall (1244) 2953 214.7 1.7e-54
XP_011530072 (OMIM: 606856,608092) PREDICTED: pall (1415) 2682 196.5 5.8e-49
NP_001159580 (OMIM: 606856,608092) palladin isofor (1123) 2589 190.1 3.7e-47
XP_011530073 (OMIM: 606856,608092) PREDICTED: pall (1377) 2444 180.4 3.8e-44
XP_011530074 (OMIM: 606856,608092) PREDICTED: pall (1344) 2420 178.8 1.2e-43
NP_001243197 (OMIM: 608517,615248) myopalladin iso (1026) 1876 142.0 1e-32
NP_115967 (OMIM: 608517,615248) myopalladin isofor (1320) 1876 142.1 1.2e-32
XP_016872323 (OMIM: 608517,615248) PREDICTED: myop (1320) 1876 142.1 1.2e-32
NP_001243196 (OMIM: 608517,615248) myopalladin iso (1320) 1876 142.1 1.2e-32
XP_016872322 (OMIM: 608517,615248) PREDICTED: myop (1346) 1876 142.1 1.3e-32
NP_001129412 (OMIM: 159000,182920,604103,609200) m ( 314) 958 79.8 1.8e-14
NP_001287840 (OMIM: 159000,182920,604103,609200) m ( 383) 961 80.0 1.8e-14
NP_006781 (OMIM: 159000,182920,604103,609200) myot ( 498) 961 80.1 2.2e-14
XP_016865549 (OMIM: 159000,182920,604103,609200) P ( 303) 948 79.1 2.7e-14
XP_016865550 (OMIM: 159000,182920,604103,609200) P ( 303) 948 79.1 2.7e-14
XP_016865551 (OMIM: 159000,182920,604103,609200) P ( 303) 948 79.1 2.7e-14
NP_596870 (OMIM: 188840,600334,603689,604145,60880 (5604) 469 47.8 0.0013
NP_003310 (OMIM: 188840,600334,603689,604145,60880 (26926) 469 48.3 0.0044
XP_016860312 (OMIM: 188840,600334,603689,604145,60 (26973) 469 48.3 0.0044
NP_597676 (OMIM: 188840,600334,603689,604145,60880 (27051) 469 48.3 0.0044
NP_597681 (OMIM: 188840,600334,603689,604145,60880 (27118) 469 48.3 0.0044
XP_016860311 (OMIM: 188840,600334,603689,604145,60 (33101) 469 48.4 0.0052
NP_596869 (OMIM: 188840,600334,603689,604145,60880 (33423) 469 48.4 0.0052
XP_016860310 (OMIM: 188840,600334,603689,604145,60 (34087) 469 48.4 0.0053
XP_016860309 (OMIM: 188840,600334,603689,604145,60 (34088) 469 48.4 0.0053
NP_001243779 (OMIM: 188840,600334,603689,604145,60 (34350) 469 48.4 0.0053
XP_016860308 (OMIM: 188840,600334,603689,604145,60 (35622) 469 48.4 0.0055
NP_001254479 (OMIM: 188840,600334,603689,604145,60 (35991) 469 48.4 0.0055
>>NP_001159582 (OMIM: 606856,608092) palladin isoform 4 (672 aa)
initn: 4603 init1: 4603 opt: 4603 Z-score: 1704.2 bits: 325.7 E(85289): 3.5e-88
Smith-Waterman score: 4603; 99.9% identity (100.0% similar) in 672 aa overlap (1-672:1-672)
10 20 30 40 50 60
pF1KSD MSALASRSAPAMQSSGSFNYARPKQFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSALASRSAPAMQSSGSFNYARPKQFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPRQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FGRAPVPPFAQPFGAEPEAPWGSSSPSPPPPPPPVFSPTAAFPVPDVFPLPPPPPPLPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGRAPVPPFAQPFGAEPEAPWGSSSPSPPPPPPPVFSPTAAFPVPDVFPLPPPPPPLPSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GQASHCSSPATRFGHGQTPAAFLSALLPSQPPPAAVNALGLPKGVTPAGFPKKASRTARI
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQASHCSSPATRFGHSQTPAAFLSALLPSQPPPAAVNALGLPKGVTPAGFPKKASRTARI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ASDEEIQGTKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATVFNIQEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASDEEIQGTKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATVFNIQEPE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD EETANQEYKVSSCEQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETANQEYKVSSCEQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD IFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD NYTIMAANPQGRISCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NYTIMAANPQGRISCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQER
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD SLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD RLECRVLGVPPPQIFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLECRVLGVPPPQIFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD NEAGIVSCTARLDVYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NEAGIVSCTARLDVYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHL
610 620 630 640 650 660
670
pF1KSD TLNTALVESEDL
::::::::::::
NP_001 TLNTALVESEDL
670
>>XP_011530071 (OMIM: 606856,608092) PREDICTED: palladin (1451 aa)
initn: 4603 init1: 4603 opt: 4603 Z-score: 1699.6 bits: 326.0 E(85289): 6.2e-88
Smith-Waterman score: 4603; 99.9% identity (100.0% similar) in 672 aa overlap (1-672:780-1451)
10 20 30
pF1KSD MSALASRSAPAMQSSGSFNYARPKQFIAAQ
::::::::::::::::::::::::::::::
XP_011 PRSAPPSPPFPPPPAFPELAACTPPASPEPMSALASRSAPAMQSSGSFNYARPKQFIAAQ
750 760 770 780 790 800
40 50 60 70 80 90
pF1KSD NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
810 820 830 840 850 860
100 110 120 130 140 150
pF1KSD PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALLPSQ
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
XP_011 PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHSQTPAAFLSALLPSQ
870 880 890 900 910 920
160 170 180 190 200 210
pF1KSD PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
930 940 950 960 970 980
220 230 240 250 260 270
pF1KSD GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLERSPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLERSPV
990 1000 1010 1020 1030 1040
280 290 300 310 320 330
pF1KSD DESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQI
1050 1060 1070 1080 1090 1100
340 350 360 370 380 390
pF1KSD SPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQRGRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQRGRS
1110 1120 1130 1140 1150 1160
400 410 420 430 440 450
pF1KSD PRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKVSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKVSGL
1170 1180 1190 1200 1210 1220
460 470 480 490 500 510
pF1KSD PTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSL
1230 1240 1250 1260 1270 1280
520 530 540 550 560 570
pF1KSD ELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHSTDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHSTDRV
1290 1300 1310 1320 1330 1340
580 590 600 610 620 630
pF1KSD SMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKPKKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKPKKV
1350 1360 1370 1380 1390 1400
640 650 660 670
pF1KSD RPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
::::::::::::::::::::::::::::::::::::::::::
XP_011 RPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
1410 1420 1430 1440 1450
>>XP_016863399 (OMIM: 606856,608092) PREDICTED: palladin (1398 aa)
initn: 4684 init1: 4239 opt: 4239 Z-score: 1567.3 bits: 301.4 E(85289): 1.5e-80
Smith-Waterman score: 4239; 99.4% identity (99.7% similar) in 619 aa overlap (1-619:780-1398)
10 20 30
pF1KSD MSALASRSAPAMQSSGSFNYARPKQFIAAQ
::::::::::::::::::::::::::::::
XP_016 PRSAPPSPPFPPPPAFPELAACTPPASPEPMSALASRSAPAMQSSGSFNYARPKQFIAAQ
750 760 770 780 790 800
40 50 60 70 80 90
pF1KSD NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
810 820 830 840 850 860
100 110 120 130 140 150
pF1KSD PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALLPSQ
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
XP_016 PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHSQTPAAFLSALLPSQ
870 880 890 900 910 920
160 170 180 190 200 210
pF1KSD PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
930 940 950 960 970 980
220 230 240 250 260 270
pF1KSD GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLERSPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLERSPV
990 1000 1010 1020 1030 1040
280 290 300 310 320 330
pF1KSD DESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQI
1050 1060 1070 1080 1090 1100
340 350 360 370 380 390
pF1KSD SPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQRGRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQRGRS
1110 1120 1130 1140 1150 1160
400 410 420 430 440 450
pF1KSD PRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKVSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKVSGL
1170 1180 1190 1200 1210 1220
460 470 480 490 500 510
pF1KSD PTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSL
1230 1240 1250 1260 1270 1280
520 530 540 550 560 570
pF1KSD ELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHSTDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHSTDRV
1290 1300 1310 1320 1330 1340
580 590 600 610 620 630
pF1KSD SMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKPKKV
::::::::::::::::::::::::::::::::::::::::::::: . :
XP_016 SMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYISRH
1350 1360 1370 1380 1390
640 650 660 670
pF1KSD RPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
>>NP_001159581 (OMIM: 606856,608092) palladin isoform 3 (777 aa)
initn: 3409 init1: 3409 opt: 3423 Z-score: 1273.5 bits: 246.2 E(85289): 3.4e-64
Smith-Waterman score: 3439; 93.5% identity (95.1% similar) in 555 aa overlap (118-672:233-777)
90 100 110 120 130 140
pF1KSD PPPPPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALL
:: : . .. :. :::..::
NP_001 QQVNNPELGLSRAALQMQFNAAERETNGVHPSRGVNGLINGKANSNKSLPTPAVLLS---
210 220 230 240 250
150 160 170 180 190 200
pF1KSD PSQPPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
:.. :: :. :: :::::::::::::::::::::::::::::::::::::::
NP_001 PTKEPPPL---LAKPK----LGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
260 270 280 290 300 310
210 220 230 240 250 260
pF1KSD LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLER
320 330 340 350 360 370
270 280 290 300 310 320
pF1KSD SPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG
380 390 400 410 420 430
330 340 350 360 370 380
pF1KSD KQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQR
440 450 460 470 480 490
390 400 410 420 430 440
pF1KSD GRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
500 510 520 530 540 550
450 460 470 480 490 500
pF1KSD SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS
560 570 580 590 600 610
510 520 530 540 550 560
pF1KSD FSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHST
620 630 640 650 660 670
570 580 590 600 610 620
pF1KSD DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKP
680 690 700 710 720 730
630 640 650 660 670
pF1KSD KKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
740 750 760 770
>>XP_011530076 (OMIM: 606856,608092) PREDICTED: palladin (1227 aa)
initn: 3409 init1: 3409 opt: 3423 Z-score: 1270.8 bits: 246.4 E(85289): 4.8e-64
Smith-Waterman score: 3439; 93.5% identity (95.1% similar) in 555 aa overlap (118-672:683-1227)
90 100 110 120 130 140
pF1KSD PPPPPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALL
:: : . .. :. :::..::
XP_011 QQVNNPELGLSRAALQMQFNAAERETNGVHPSRGVNGLINGKANSNKSLPTPAVLLS---
660 670 680 690 700
150 160 170 180 190 200
pF1KSD PSQPPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
:.. :: :. :: :::::::::::::::::::::::::::::::::::::::
XP_011 PTKEPPPL---LAKPK----LGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
710 720 730 740 750 760
210 220 230 240 250 260
pF1KSD LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLER
770 780 790 800 810 820
270 280 290 300 310 320
pF1KSD SPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG
830 840 850 860 870 880
330 340 350 360 370 380
pF1KSD KQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQR
890 900 910 920 930 940
390 400 410 420 430 440
pF1KSD GRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
950 960 970 980 990 1000
450 460 470 480 490 500
pF1KSD SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS
1010 1020 1030 1040 1050 1060
510 520 530 540 550 560
pF1KSD FSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHST
1070 1080 1090 1100 1110 1120
570 580 590 600 610 620
pF1KSD DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKP
1130 1140 1150 1160 1170 1180
630 640 650 660 670
pF1KSD KKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
1190 1200 1210 1220
>>NP_057165 (OMIM: 606856,608092) palladin isoform 2 [Ho (1106 aa)
initn: 3695 init1: 3045 opt: 3059 Z-score: 1138.8 bits: 221.8 E(85289): 1.1e-56
Smith-Waterman score: 3075; 92.2% identity (94.2% similar) in 502 aa overlap (118-619:615-1106)
90 100 110 120 130 140
pF1KSD PPPPPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALL
:: : . .. :. :::..::
NP_057 QQVNNPELGLSRAALQMQFNAAERETNGVHPSRGVNGLINGKANSNKSLPTPAVLLS---
590 600 610 620 630 640
150 160 170 180 190 200
pF1KSD PSQPPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
:.. :: :. :: :::::::::::::::::::::::::::::::::::::::
NP_057 PTKEPPPL---LAKPK----LGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDL
650 660 670 680 690
210 220 230 240 250 260
pF1KSD LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LNNGQPRLTYEERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQRLISEIEYRLER
700 710 720 730 740 750
270 280 290 300 310 320
pF1KSD SPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 SPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG
760 770 780 790 800 810
330 340 350 360 370 380
pF1KSD KQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQR
820 830 840 850 860 870
390 400 410 420 430 440
pF1KSD GRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 GRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKV
880 890 900 910 920 930
450 460 470 480 490 500
pF1KSD SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS
940 950 960 970 980 990
510 520 530 540 550 560
pF1KSD FSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 FSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQIFWKKENESLTHST
1000 1010 1020 1030 1040 1050
570 580 590 600 610 620
pF1KSD DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQSTKP
:::::::::::::::::::::::::::::::::::::::::::::::: . :
NP_057 DRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYISRH
1060 1070 1080 1090 1100
630 640 650 660 670
pF1KSD KKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
>>XP_011530077 (OMIM: 606856,608092) PREDICTED: palladin (1018 aa)
initn: 2916 init1: 2916 opt: 3046 Z-score: 1134.6 bits: 220.9 E(85289): 1.9e-56
Smith-Waterman score: 4559; 97.4% identity (97.5% similar) in 689 aa overlap (1-672:330-1018)
10 20 30
pF1KSD MSALASRSAPAMQSSGSFNYARPKQFIAAQ
::::::::::::::::::::::::::::::
XP_011 PRSAPPSPPFPPPPAFPELAACTPPASPEPMSALASRSAPAMQSSGSFNYARPKQFIAAQ
300 310 320 330 340 350
40 50 60 70 80 90
pF1KSD NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
360 370 380 390 400 410
100 110 120 130 140 150
pF1KSD PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALLPSQ
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
XP_011 PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHSQTPAAFLSALLPSQ
420 430 440 450 460 470
160 170 180 190 200 210
pF1KSD PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
480 490 500 510 520 530
220 230 240 250
pF1KSD GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQ-----------------EYKVSSC
:::::::::::::::::::::::::::::::::::: :::::::
XP_011 GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQDIGSPHASVGSPLDGQKEYKVSSC
540 550 560 570 580 590
260 270 280 290 300 310
pF1KSD EQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRV
600 610 620 630 640 650
320 330 340 350 360 370
pF1KSD AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI
660 670 680 690 700 710
380 390 400 410 420 430
pF1KSD SCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDL
720 730 740 750 760 770
440 450 460 470 480 490
pF1KSD TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG
780 790 800 810 820 830
500 510 520 530 540 550
pF1KSD IYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
840 850 860 870 880 890
560 570 580 590 600 610
pF1KSD IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLD
900 910 920 930 940 950
620 630 640 650 660 670
pF1KSD VYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
960 970 980 990 1000 1010
>>XP_005262923 (OMIM: 606856,608092) PREDICTED: palladin (1018 aa)
initn: 2916 init1: 2916 opt: 3046 Z-score: 1134.6 bits: 220.9 E(85289): 1.9e-56
Smith-Waterman score: 4559; 97.4% identity (97.5% similar) in 689 aa overlap (1-672:330-1018)
10 20 30
pF1KSD MSALASRSAPAMQSSGSFNYARPKQFIAAQ
::::::::::::::::::::::::::::::
XP_005 PRSAPPSPPFPPPPAFPELAACTPPASPEPMSALASRSAPAMQSSGSFNYARPKQFIAAQ
300 310 320 330 340 350
40 50 60 70 80 90
pF1KSD NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
360 370 380 390 400 410
100 110 120 130 140 150
pF1KSD PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALLPSQ
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
XP_005 PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHSQTPAAFLSALLPSQ
420 430 440 450 460 470
160 170 180 190 200 210
pF1KSD PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
480 490 500 510 520 530
220 230 240 250
pF1KSD GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQ-----------------EYKVSSC
:::::::::::::::::::::::::::::::::::: :::::::
XP_005 GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQDIGSPHASVGSPLDGQKEYKVSSC
540 550 560 570 580 590
260 270 280 290 300 310
pF1KSD EQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRV
600 610 620 630 640 650
320 330 340 350 360 370
pF1KSD AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI
660 670 680 690 700 710
380 390 400 410 420 430
pF1KSD SCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDL
720 730 740 750 760 770
440 450 460 470 480 490
pF1KSD TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG
780 790 800 810 820 830
500 510 520 530 540 550
pF1KSD IYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
840 850 860 870 880 890
560 570 580 590 600 610
pF1KSD IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLD
900 910 920 930 940 950
620 630 640 650 660 670
pF1KSD VYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
960 970 980 990 1000 1010
>>XP_005262918 (OMIM: 606856,608092) PREDICTED: palladin (1400 aa)
initn: 2916 init1: 2916 opt: 3046 Z-score: 1132.7 bits: 221.0 E(85289): 2.4e-56
Smith-Waterman score: 4559; 97.4% identity (97.5% similar) in 689 aa overlap (1-672:712-1400)
10 20 30
pF1KSD MSALASRSAPAMQSSGSFNYARPKQFIAAQ
::::::::::::::::::::::::::::::
XP_005 PRSAPPSPPFPPPPAFPELAACTPPASPEPMSALASRSAPAMQSSGSFNYARPKQFIAAQ
690 700 710 720 730 740
40 50 60 70 80 90
pF1KSD NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
750 760 770 780 790 800
100 110 120 130 140 150
pF1KSD PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALLPSQ
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
XP_005 PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHSQTPAAFLSALLPSQ
810 820 830 840 850 860
160 170 180 190 200 210
pF1KSD PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
870 880 890 900 910 920
220 230 240 250
pF1KSD GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQ-----------------EYKVSSC
:::::::::::::::::::::::::::::::::::: :::::::
XP_005 GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQDIGSPHASVGSPLDGQKEYKVSSC
930 940 950 960 970 980
260 270 280 290 300 310
pF1KSD EQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRV
990 1000 1010 1020 1030 1040
320 330 340 350 360 370
pF1KSD AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI
1050 1060 1070 1080 1090 1100
380 390 400 410 420 430
pF1KSD SCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDL
1110 1120 1130 1140 1150 1160
440 450 460 470 480 490
pF1KSD TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG
1170 1180 1190 1200 1210 1220
500 510 520 530 540 550
pF1KSD IYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
1230 1240 1250 1260 1270 1280
560 570 580 590 600 610
pF1KSD IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLD
1290 1300 1310 1320 1330 1340
620 630 640 650 660 670
pF1KSD VYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
1350 1360 1370 1380 1390 1400
>>XP_011530070 (OMIM: 606856,608092) PREDICTED: palladin (1468 aa)
initn: 2916 init1: 2916 opt: 3046 Z-score: 1132.4 bits: 221.0 E(85289): 2.5e-56
Smith-Waterman score: 4559; 97.4% identity (97.5% similar) in 689 aa overlap (1-672:780-1468)
10 20 30
pF1KSD MSALASRSAPAMQSSGSFNYARPKQFIAAQ
::::::::::::::::::::::::::::::
XP_011 PRSAPPSPPFPPPPAFPELAACTPPASPEPMSALASRSAPAMQSSGSFNYARPKQFIAAQ
750 760 770 780 790 800
40 50 60 70 80 90
pF1KSD NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLGPASGHGTPASSPSSSSLPSPMSPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPP
810 820 830 840 850 860
100 110 120 130 140 150
pF1KSD PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHGQTPAAFLSALLPSQ
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
XP_011 PPPPVFSPTAAFPVPDVFPLPPPPPPLPSPGQASHCSSPATRFGHSQTPAAFLSALLPSQ
870 880 890 900 910 920
160 170 180 190 200 210
pF1KSD PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPAAVNALGLPKGVTPAGFPKKASRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNN
930 940 950 960 970 980
220 230 240 250
pF1KSD GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQ-----------------EYKVSSC
:::::::::::::::::::::::::::::::::::: :::::::
XP_011 GQPRLTYEERMARRLLGADSATVFNIQEPEEETANQDIGSPHASVGSPLDGQKEYKVSSC
990 1000 1010 1020 1030 1040
260 270 280 290 300 310
pF1KSD EQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQRLISEIEYRLERSPVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRV
1050 1060 1070 1080 1090 1100
320 330 340 350 360 370
pF1KSD AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI
1110 1120 1130 1140 1150 1160
380 390 400 410 420 430
pF1KSD SCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDL
1170 1180 1190 1200 1210 1220
440 450 460 470 480 490
pF1KSD TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG
1230 1240 1250 1260 1270 1280
500 510 520 530 540 550
pF1KSD IYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
1290 1300 1310 1320 1330 1340
560 570 580 590 600 610
pF1KSD IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLD
1350 1360 1370 1380 1390 1400
620 630 640 650 660 670
pF1KSD VYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VYTQWHQQSQSTKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL
1410 1420 1430 1440 1450 1460
672 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:34:23 2016 done: Thu Nov 3 04:34:25 2016
Total Scan time: 14.100 Total Display time: 0.180
Function used was FASTA [36.3.4 Apr, 2011]