Result of FASTA (omim) for
pF1KSDA1034
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1034, 733 aa
1>>>pF1KSDA1034 733 - 733 aa - 733 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.7418+/-0.00033; mu= 6.1652+/- 0.021
mean_var=181.7820+/-36.462, 0's: 0 Z-trim(121.5): 29 B-trim: 0 in 0/57
Lambda= 0.095126
statistics sampled from 38262 (38292) to 38262 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.449), width: 16
Scan time: 12.020
The best scores are: opt bits E(85289)
XP_011509142 (OMIM: 608148,612313) PREDICTED: DNA- ( 733) 4855 678.6 2.5e-194
NP_001165988 (OMIM: 608148,612313) DNA-binding pro ( 733) 4855 678.6 2.5e-194
XP_006712435 (OMIM: 608148,612313) PREDICTED: DNA- ( 733) 4855 678.6 2.5e-194
NP_056080 (OMIM: 608148,612313) DNA-binding protei ( 733) 4855 678.6 2.5e-194
NP_001165980 (OMIM: 608148,612313) DNA-binding pro ( 733) 4855 678.6 2.5e-194
XP_005246453 (OMIM: 608148,612313) PREDICTED: DNA- ( 675) 4452 623.2 1e-177
XP_016859145 (OMIM: 608148,612313) PREDICTED: DNA- ( 675) 4452 623.2 1e-177
NP_001124482 (OMIM: 602075) DNA-binding protein SA ( 763) 2371 337.7 1.1e-91
NP_002962 (OMIM: 602075) DNA-binding protein SATB1 ( 763) 2371 337.7 1.1e-91
NP_001309803 (OMIM: 602075) DNA-binding protein SA ( 763) 2371 337.7 1.1e-91
NP_001309804 (OMIM: 602075) DNA-binding protein SA ( 763) 2371 337.7 1.1e-91
NP_001309801 (OMIM: 602075) DNA-binding protein SA ( 763) 2371 337.7 1.1e-91
NP_001309802 (OMIM: 602075) DNA-binding protein SA ( 763) 2371 337.7 1.1e-91
NP_001309805 (OMIM: 602075) DNA-binding protein SA ( 691) 2350 334.8 7.3e-91
NP_001182399 (OMIM: 602075) DNA-binding protein SA ( 795) 2312 329.6 3e-89
XP_011532291 (OMIM: 602075) PREDICTED: DNA-binding ( 795) 2312 329.6 3e-89
NP_001309800 (OMIM: 602075) DNA-binding protein SA ( 795) 2312 329.6 3e-89
XP_011532290 (OMIM: 602075) PREDICTED: DNA-binding ( 795) 2312 329.6 3e-89
XP_011532292 (OMIM: 602075) PREDICTED: DNA-binding ( 534) 1962 281.4 6.3e-75
>>XP_011509142 (OMIM: 608148,612313) PREDICTED: DNA-bind (733 aa)
initn: 4855 init1: 4855 opt: 4855 Z-score: 3609.8 bits: 678.6 E(85289): 2.5e-194
Smith-Waterman score: 4855; 100.0% identity (100.0% similar) in 733 aa overlap (1-733:1-733)
10 20 30 40 50 60
pF1KSD MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA
670 680 690 700 710 720
730
pF1KSD DKSKAAPAEIDQR
:::::::::::::
XP_011 DKSKAAPAEIDQR
730
>>NP_001165988 (OMIM: 608148,612313) DNA-binding protein (733 aa)
initn: 4855 init1: 4855 opt: 4855 Z-score: 3609.8 bits: 678.6 E(85289): 2.5e-194
Smith-Waterman score: 4855; 100.0% identity (100.0% similar) in 733 aa overlap (1-733:1-733)
10 20 30 40 50 60
pF1KSD MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA
670 680 690 700 710 720
730
pF1KSD DKSKAAPAEIDQR
:::::::::::::
NP_001 DKSKAAPAEIDQR
730
>>XP_006712435 (OMIM: 608148,612313) PREDICTED: DNA-bind (733 aa)
initn: 4855 init1: 4855 opt: 4855 Z-score: 3609.8 bits: 678.6 E(85289): 2.5e-194
Smith-Waterman score: 4855; 100.0% identity (100.0% similar) in 733 aa overlap (1-733:1-733)
10 20 30 40 50 60
pF1KSD MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA
670 680 690 700 710 720
730
pF1KSD DKSKAAPAEIDQR
:::::::::::::
XP_006 DKSKAAPAEIDQR
730
>>NP_056080 (OMIM: 608148,612313) DNA-binding protein SA (733 aa)
initn: 4855 init1: 4855 opt: 4855 Z-score: 3609.8 bits: 678.6 E(85289): 2.5e-194
Smith-Waterman score: 4855; 100.0% identity (100.0% similar) in 733 aa overlap (1-733:1-733)
10 20 30 40 50 60
pF1KSD MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA
670 680 690 700 710 720
730
pF1KSD DKSKAAPAEIDQR
:::::::::::::
NP_056 DKSKAAPAEIDQR
730
>>NP_001165980 (OMIM: 608148,612313) DNA-binding protein (733 aa)
initn: 4855 init1: 4855 opt: 4855 Z-score: 3609.8 bits: 678.6 E(85289): 2.5e-194
Smith-Waterman score: 4855; 100.0% identity (100.0% similar) in 733 aa overlap (1-733:1-733)
10 20 30 40 50 60
pF1KSD MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA
670 680 690 700 710 720
730
pF1KSD DKSKAAPAEIDQR
:::::::::::::
NP_001 DKSKAAPAEIDQR
730
>>XP_005246453 (OMIM: 608148,612313) PREDICTED: DNA-bind (675 aa)
initn: 4452 init1: 4452 opt: 4452 Z-score: 3311.5 bits: 623.2 E(85289): 1e-177
Smith-Waterman score: 4452; 100.0% identity (100.0% similar) in 675 aa overlap (59-733:1-675)
30 40 50 60 70 80
pF1KSD VKVARLEQNGSPMGARGRPNGAVAKAVGGLMIPVFCVVEQLDGSLEYDNREEHAEFVLVR
::::::::::::::::::::::::::::::
XP_005 MIPVFCVVEQLDGSLEYDNREEHAEFVLVR
10 20 30
90 100 110 120 130 140
pF1KSD KDVLFSQLVETALLALGYSHSSAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KDVLFSQLVETALLALGYSHSSAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYH
40 50 60 70 80 90
150 160 170 180 190 200
pF1KSD VVTLKIQLQSCSKLEDLPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VVTLKIQLQSCSKLEDLPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNS
100 110 120 130 140 150
210 220 230 240 250 260
pF1KSD TYYANVSATKCQEFGRWYKKYKKIKVERVERENLSDYCVLGQRPMHLPNMNQLASLGKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TYYANVSATKCQEFGRWYKKYKKIKVERVERENLSDYCVLGQRPMHLPNMNQLASLGKTN
160 170 180 190 200 210
270 280 290 300 310 320
pF1KSD EQSPHSQIHHSTPIRNQVPALQPIMSPGLLSPQLSPQLVRQQIAMAHLINQQIAVSRLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EQSPHSQIHHSTPIRNQVPALQPIMSPGLLSPQLSPQLVRQQIAMAHLINQQIAVSRLLA
220 230 240 250 260 270
330 340 350 360 370 380
pF1KSD HQHPQAINQQFLNHPPIPRAVKPEPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HQHPQAINQQFLNHPPIPRAVKPEPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFN
280 290 300 310 320 330
390 400 410 420 430 440
pF1KSD RTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMV
340 350 360 370 380 390
450 460 470 480 490 500
pF1KSD SSASSSPSSSRTPQAKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSASSSPSSSRTPQAKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKV
400 410 420 430 440 450
510 520 530 540 550 560
pF1KSD AANKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESRHHHSERM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AANKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESRHHHSERM
460 470 480 490 500 510
570 580 590 600 610 620
pF1KSD QHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALGI
520 530 540 550 560 570
630 640 650 660 670 680
pF1KSD LQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEHLGSAVDVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEHLGSAVDVAE
580 590 600 610 620 630
690 700 710 720 730
pF1KSD YKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAPAEIDQR
:::::::::::::::::::::::::::::::::::::::::::::
XP_005 YKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAPAEIDQR
640 650 660 670
>>XP_016859145 (OMIM: 608148,612313) PREDICTED: DNA-bind (675 aa)
initn: 4452 init1: 4452 opt: 4452 Z-score: 3311.5 bits: 623.2 E(85289): 1e-177
Smith-Waterman score: 4452; 100.0% identity (100.0% similar) in 675 aa overlap (59-733:1-675)
30 40 50 60 70 80
pF1KSD VKVARLEQNGSPMGARGRPNGAVAKAVGGLMIPVFCVVEQLDGSLEYDNREEHAEFVLVR
::::::::::::::::::::::::::::::
XP_016 MIPVFCVVEQLDGSLEYDNREEHAEFVLVR
10 20 30
90 100 110 120 130 140
pF1KSD KDVLFSQLVETALLALGYSHSSAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDVLFSQLVETALLALGYSHSSAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYH
40 50 60 70 80 90
150 160 170 180 190 200
pF1KSD VVTLKIQLQSCSKLEDLPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVTLKIQLQSCSKLEDLPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNS
100 110 120 130 140 150
210 220 230 240 250 260
pF1KSD TYYANVSATKCQEFGRWYKKYKKIKVERVERENLSDYCVLGQRPMHLPNMNQLASLGKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TYYANVSATKCQEFGRWYKKYKKIKVERVERENLSDYCVLGQRPMHLPNMNQLASLGKTN
160 170 180 190 200 210
270 280 290 300 310 320
pF1KSD EQSPHSQIHHSTPIRNQVPALQPIMSPGLLSPQLSPQLVRQQIAMAHLINQQIAVSRLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQSPHSQIHHSTPIRNQVPALQPIMSPGLLSPQLSPQLVRQQIAMAHLINQQIAVSRLLA
220 230 240 250 260 270
330 340 350 360 370 380
pF1KSD HQHPQAINQQFLNHPPIPRAVKPEPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HQHPQAINQQFLNHPPIPRAVKPEPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFN
280 290 300 310 320 330
390 400 410 420 430 440
pF1KSD RTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMV
340 350 360 370 380 390
450 460 470 480 490 500
pF1KSD SSASSSPSSSRTPQAKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSASSSPSSSRTPQAKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKV
400 410 420 430 440 450
510 520 530 540 550 560
pF1KSD AANKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESRHHHSERM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AANKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESRHHHSERM
460 470 480 490 500 510
570 580 590 600 610 620
pF1KSD QHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALGI
520 530 540 550 560 570
630 640 650 660 670 680
pF1KSD LQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEHLGSAVDVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEHLGSAVDVAE
580 590 600 610 620 630
690 700 710 720 730
pF1KSD YKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAPAEIDQR
:::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAPAEIDQR
640 650 660 670
>>NP_001124482 (OMIM: 602075) DNA-binding protein SATB1 (763 aa)
initn: 2339 init1: 1042 opt: 2371 Z-score: 1767.2 bits: 337.7 E(85289): 1.1e-91
Smith-Waterman score: 2873; 62.1% identity (80.4% similar) in 760 aa overlap (1-718:1-748)
10 20 30 40 50
pF1KSD MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVG----
:.. .:. .. . .. : :::: .:.:::::::::.: ::: ... :: :
NP_001 MDHLNEATQGKEHSEMSNNVSDPKGPP-AKIARLEQNGSPLG-RGRLGSTGAKMQGVPLK
10 20 30 40 50
60 70 80 90 100
pF1KSD ------------GLMIPVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLAL
: :.:::::::. ....::: .::::::::::::.::.::.: :::.:
NP_001 HSGHLMKTNLRKGTMLPVFCVVEHYENAIEYDCKEEHAEFVLVRKDMLFNQLIEMALLSL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KSD GYSHSSAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLED
::::::::::.:.:..:.:::.::::::::::::::::::::::::::::::.:: ::::
NP_001 GYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLED
120 130 140 150 160 170
170 180 190 200 210 220
pF1KSD LPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGR
:: :::.:.:::::::.:::.::::.::::::::::::::::::::::::::.:::::::
NP_001 LPPEQWSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGR
180 190 200 210 220 230
230 240 250 260 270 280
pF1KSD WYKKYKKIKVERVERENLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPH-SQIHH-STP-
:::..:: : :: ..::. :.:. . :..: :.: :: : .:. : : :
NP_001 WYKHFKKTKDMMVEMDSLSE---LSQQGANHVNFGQQPVPGNTAEQPPSPAQLSHGSQPS
240 250 260 270 280 290
290 300 310 320 330 340
pF1KSD IRNQVPALQPIMSPGLLSPQLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLN
.:. .: :.: ::.: .::::: ::..::.:.::: ::.::::.: ..:::.::
NP_001 VRTPLPNLHP----GLVSTPISPQLVNQQLVMAQLLNQQYAVNRLLAQQ---SLNQQYLN
300 310 320 330 340
350 360 370 380 390
pF1KSD HPP-IPRAV-KP--EPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEI
::: . :.. :: . .....::: .::: ::::::::..::::::::::::::::::::
NP_001 HPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEI
350 360 370 380 390 400
400 410 420 430 440 450
pF1KSD LRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSS
:::::::.:::::::::::::::::.:::.:::::::::::::.: .: . :
NP_001 LRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQDERERSLNAASAMGPAPLISTPP
410 420 430 440 450 460
460 470 480 490 500 510
pF1KSD SRTPQAKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWL
:: ::.::.: .:. : .. ..::.:.::::::::::::::::::::::::.::::::
NP_001 SRPPQVKTATIATERNGKPENNTMNINASIYDEIQQEMKRAKVSQALFAKVAATKSQGWL
470 480 490 500 510 520
520 530 540 550 560 570
pF1KSD CELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESR--HHHSERMQHVVQLP
::::::::.:::::::::::: :::::.::: :::.:::.:: :::..: :....:
NP_001 CELLRWKEDPSPENRTLWENLSMIRRFLSLPQPERDAIYEQESNAVHHHGDRPPHIIHVP
530 540 550 560 570 580
580 590 600 610
pF1KSD PEPVQVLHRQQSQPAKESS---PPREEAPP---P--PP--PTEDSCA-------KKPRSR
: .: ..::.: .... ::. . : : :: :: : : .: : :
NP_001 AEQIQQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAESDEENRQKTRPR
590 600 610 620 630 640
620 630 640 650 660 670
pF1KSD TKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKE
::::.::::::::::.:::::::.:::.::::::::::.:::::::::::..:::::::.
NP_001 TKISVEALGILQSFIQDVGLYPDEEAIQTLSAQLDLPKYTIIKFFQNQRYYLKHHGKLKD
650 660 670 680 690 700
680 690 700 710 720 730
pF1KSD HLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAPAEIDQR
. : :::::::.:::: . ::. ...... ...:. :::
NP_001 NSGLEVDVAEYKEEELLKDLEESVQDKNTNTLFSVKLEEELSVEGNTDINTDLKD
710 720 730 740 750 760
>>NP_002962 (OMIM: 602075) DNA-binding protein SATB1 iso (763 aa)
initn: 2339 init1: 1042 opt: 2371 Z-score: 1767.2 bits: 337.7 E(85289): 1.1e-91
Smith-Waterman score: 2873; 62.1% identity (80.4% similar) in 760 aa overlap (1-718:1-748)
10 20 30 40 50
pF1KSD MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVG----
:.. .:. .. . .. : :::: .:.:::::::::.: ::: ... :: :
NP_002 MDHLNEATQGKEHSEMSNNVSDPKGPP-AKIARLEQNGSPLG-RGRLGSTGAKMQGVPLK
10 20 30 40 50
60 70 80 90 100
pF1KSD ------------GLMIPVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLAL
: :.:::::::. ....::: .::::::::::::.::.::.: :::.:
NP_002 HSGHLMKTNLRKGTMLPVFCVVEHYENAIEYDCKEEHAEFVLVRKDMLFNQLIEMALLSL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KSD GYSHSSAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLED
::::::::::.:.:..:.:::.::::::::::::::::::::::::::::::.:: ::::
NP_002 GYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLED
120 130 140 150 160 170
170 180 190 200 210 220
pF1KSD LPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGR
:: :::.:.:::::::.:::.::::.::::::::::::::::::::::::::.:::::::
NP_002 LPPEQWSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGR
180 190 200 210 220 230
230 240 250 260 270 280
pF1KSD WYKKYKKIKVERVERENLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPH-SQIHH-STP-
:::..:: : :: ..::. :.:. . :..: :.: :: : .:. : : :
NP_002 WYKHFKKTKDMMVEMDSLSE---LSQQGANHVNFGQQPVPGNTAEQPPSPAQLSHGSQPS
240 250 260 270 280 290
290 300 310 320 330 340
pF1KSD IRNQVPALQPIMSPGLLSPQLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLN
.:. .: :.: ::.: .::::: ::..::.:.::: ::.::::.: ..:::.::
NP_002 VRTPLPNLHP----GLVSTPISPQLVNQQLVMAQLLNQQYAVNRLLAQQ---SLNQQYLN
300 310 320 330 340
350 360 370 380 390
pF1KSD HPP-IPRAV-KP--EPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEI
::: . :.. :: . .....::: .::: ::::::::..::::::::::::::::::::
NP_002 HPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEI
350 360 370 380 390 400
400 410 420 430 440 450
pF1KSD LRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSS
:::::::.:::::::::::::::::.:::.:::::::::::::.: .: . :
NP_002 LRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQDERERSLNAASAMGPAPLISTPP
410 420 430 440 450 460
460 470 480 490 500 510
pF1KSD SRTPQAKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWL
:: ::.::.: .:. : .. ..::.:.::::::::::::::::::::::::.::::::
NP_002 SRPPQVKTATIATERNGKPENNTMNINASIYDEIQQEMKRAKVSQALFAKVAATKSQGWL
470 480 490 500 510 520
520 530 540 550 560 570
pF1KSD CELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESR--HHHSERMQHVVQLP
::::::::.:::::::::::: :::::.::: :::.:::.:: :::..: :....:
NP_002 CELLRWKEDPSPENRTLWENLSMIRRFLSLPQPERDAIYEQESNAVHHHGDRPPHIIHVP
530 540 550 560 570 580
580 590 600 610
pF1KSD PEPVQVLHRQQSQPAKESS---PPREEAPP---P--PP--PTEDSCA-------KKPRSR
: .: ..::.: .... ::. . : : :: :: : : .: : :
NP_002 AEQIQQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAESDEENRQKTRPR
590 600 610 620 630 640
620 630 640 650 660 670
pF1KSD TKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKE
::::.::::::::::.:::::::.:::.::::::::::.:::::::::::..:::::::.
NP_002 TKISVEALGILQSFIQDVGLYPDEEAIQTLSAQLDLPKYTIIKFFQNQRYYLKHHGKLKD
650 660 670 680 690 700
680 690 700 710 720 730
pF1KSD HLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAPAEIDQR
. : :::::::.:::: . ::. ...... ...:. :::
NP_002 NSGLEVDVAEYKEEELLKDLEESVQDKNTNTLFSVKLEEELSVEGNTDINTDLKD
710 720 730 740 750 760
>>NP_001309803 (OMIM: 602075) DNA-binding protein SATB1 (763 aa)
initn: 2339 init1: 1042 opt: 2371 Z-score: 1767.2 bits: 337.7 E(85289): 1.1e-91
Smith-Waterman score: 2873; 62.1% identity (80.4% similar) in 760 aa overlap (1-718:1-748)
10 20 30 40 50
pF1KSD MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVG----
:.. .:. .. . .. : :::: .:.:::::::::.: ::: ... :: :
NP_001 MDHLNEATQGKEHSEMSNNVSDPKGPP-AKIARLEQNGSPLG-RGRLGSTGAKMQGVPLK
10 20 30 40 50
60 70 80 90 100
pF1KSD ------------GLMIPVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLAL
: :.:::::::. ....::: .::::::::::::.::.::.: :::.:
NP_001 HSGHLMKTNLRKGTMLPVFCVVEHYENAIEYDCKEEHAEFVLVRKDMLFNQLIEMALLSL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KSD GYSHSSAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLED
::::::::::.:.:..:.:::.::::::::::::::::::::::::::::::.:: ::::
NP_001 GYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLED
120 130 140 150 160 170
170 180 190 200 210 220
pF1KSD LPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGR
:: :::.:.:::::::.:::.::::.::::::::::::::::::::::::::.:::::::
NP_001 LPPEQWSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGR
180 190 200 210 220 230
230 240 250 260 270 280
pF1KSD WYKKYKKIKVERVERENLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPH-SQIHH-STP-
:::..:: : :: ..::. :.:. . :..: :.: :: : .:. : : :
NP_001 WYKHFKKTKDMMVEMDSLSE---LSQQGANHVNFGQQPVPGNTAEQPPSPAQLSHGSQPS
240 250 260 270 280 290
290 300 310 320 330 340
pF1KSD IRNQVPALQPIMSPGLLSPQLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLN
.:. .: :.: ::.: .::::: ::..::.:.::: ::.::::.: ..:::.::
NP_001 VRTPLPNLHP----GLVSTPISPQLVNQQLVMAQLLNQQYAVNRLLAQQ---SLNQQYLN
300 310 320 330 340
350 360 370 380 390
pF1KSD HPP-IPRAV-KP--EPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEI
::: . :.. :: . .....::: .::: ::::::::..::::::::::::::::::::
NP_001 HPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEI
350 360 370 380 390 400
400 410 420 430 440 450
pF1KSD LRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSS
:::::::.:::::::::::::::::.:::.:::::::::::::.: .: . :
NP_001 LRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQDERERSLNAASAMGPAPLISTPP
410 420 430 440 450 460
460 470 480 490 500 510
pF1KSD SRTPQAKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWL
:: ::.::.: .:. : .. ..::.:.::::::::::::::::::::::::.::::::
NP_001 SRPPQVKTATIATERNGKPENNTMNINASIYDEIQQEMKRAKVSQALFAKVAATKSQGWL
470 480 490 500 510 520
520 530 540 550 560 570
pF1KSD CELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESR--HHHSERMQHVVQLP
::::::::.:::::::::::: :::::.::: :::.:::.:: :::..: :....:
NP_001 CELLRWKEDPSPENRTLWENLSMIRRFLSLPQPERDAIYEQESNAVHHHGDRPPHIIHVP
530 540 550 560 570 580
580 590 600 610
pF1KSD PEPVQVLHRQQSQPAKESS---PPREEAPP---P--PP--PTEDSCA-------KKPRSR
: .: ..::.: .... ::. . : : :: :: : : .: : :
NP_001 AEQIQQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAESDEENRQKTRPR
590 600 610 620 630 640
620 630 640 650 660 670
pF1KSD TKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKE
::::.::::::::::.:::::::.:::.::::::::::.:::::::::::..:::::::.
NP_001 TKISVEALGILQSFIQDVGLYPDEEAIQTLSAQLDLPKYTIIKFFQNQRYYLKHHGKLKD
650 660 670 680 690 700
680 690 700 710 720 730
pF1KSD HLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAPAEIDQR
. : :::::::.:::: . ::. ...... ...:. :::
NP_001 NSGLEVDVAEYKEEELLKDLEESVQDKNTNTLFSVKLEEELSVEGNTDINTDLKD
710 720 730 740 750 760
733 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:41:09 2016 done: Thu Nov 3 04:41:11 2016
Total Scan time: 12.020 Total Display time: 0.220
Function used was FASTA [36.3.4 Apr, 2011]