Result of FASTA (ccds) for
pF1KSDA1133
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1133, 836 aa
1>>>pF1KSDA1133 836 - 836 aa - 836 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.0319+/-0.000859; mu= 10.0631+/- 0.052
mean_var=201.1327+/-39.745, 0's: 0 Z-trim(114.7): 59 B-trim: 72 in 1/53
Lambda= 0.090434
statistics sampled from 15172 (15231) to 15172 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.785), E-opt: 0.2 (0.468), width: 16
Scan time: 5.150
The best scores are: opt bits E(32554)
CCDS42999.1 ZNRF3 gene_id:84133|Hs108|chr22 ( 836) 5876 779.6 0
CCDS56225.1 ZNRF3 gene_id:84133|Hs108|chr22 ( 936) 5876 779.7 0
CCDS11607.1 RNF43 gene_id:54894|Hs108|chr17 ( 783) 662 99.3 2.7e-20
CCDS82172.1 RNF43 gene_id:54894|Hs108|chr17 ( 656) 507 79.0 2.9e-14
>>CCDS42999.1 ZNRF3 gene_id:84133|Hs108|chr22 (836 aa)
initn: 5876 init1: 5876 opt: 5876 Z-score: 4154.0 bits: 779.6 E(32554): 0
Smith-Waterman score: 5876; 100.0% identity (100.0% similar) in 836 aa overlap (1-836:1-836)
10 20 30 40 50 60
pF1KSD MHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQPTEYFDMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQPTEYFDMG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD IFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 IFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD KGNPSAVCVETSNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KGNPSAVCVETSNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RHGEQSLYSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RHGEQSLYSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD CFSQYETMYQHYYFQGLSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CFSQYETMYQHYYFQGLSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD LESGSTSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LESGSTSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD GSCSTFRSSLSSDYDPFIYRSRSPCRASEAGGSGSSGRGPALCFEGSPPPEELPAVHSHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GSCSTFRSSLSSDYDPFIYRSRSPCRASEAGGSGSSGRGPALCFEGSPPPEELPAVHSHG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AGRGEPWPGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 AGRGEPWPGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD WKGGHELPSCACCCEPQPSPAGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 WKGGHELPSCACCCEPQPSPAGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD LHPDHLPRTDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LHPDHLPRTDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD GARDLSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GARDLSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERAL
730 740 750 760 770 780
790 800 810 820 830
pF1KSD CCQARALLRPGCPPEEAGAVRANFPSALQDTQESSTTATEAAGPRSHSADSSSPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CCQARALLRPGCPPEEAGAVRANFPSALQDTQESSTTATEAAGPRSHSADSSSPGA
790 800 810 820 830
>>CCDS56225.1 ZNRF3 gene_id:84133|Hs108|chr22 (936 aa)
initn: 5876 init1: 5876 opt: 5876 Z-score: 4153.3 bits: 779.7 E(32554): 0
Smith-Waterman score: 5876; 100.0% identity (100.0% similar) in 836 aa overlap (1-836:101-936)
10 20 30
pF1KSD MHPLGLCNNNDEEDLYEYGWVGVVKLEQPE
::::::::::::::::::::::::::::::
CCDS56 SGDYTTYTTGLTGRFSRAGATLSAEGEIVQMHPLGLCNNNDEEDLYEYGWVGVVKLEQPE
80 90 100 110 120 130
40 50 60 70 80 90
pF1KSD LDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIK
140 150 160 170 180 190
100 110 120 130 140 150
pF1KSD LMNIVNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LMNIVNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQNS
200 210 220 230 240 250
160 170 180 190 200 210
pF1KSD MNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIP
260 270 280 290 300 310
220 230 240 250 260 270
pF1KSD CTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQRVTLPVHYPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 CTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQRVTLPVHYPG
320 330 340 350 360 370
280 290 300 310 320 330
pF1KSD RVHRTNAIPAYPTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYPPLHLDHSLAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RVHRTNAIPAYPTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYPPLHLDHSLAA
380 390 400 410 420 430
340 350 360 370 380 390
pF1KSD HRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQGLSYPEQEGQSPPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 HRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQGLSYPEQEGQSPPSL
440 450 460 470 480 490
400 410 420 430 440 450
pF1KSD APRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCSGYLADCPGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 APRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCSGYLADCPGSD
500 510 520 530 540 550
460 470 480 490 500 510
pF1KSD SSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRSRSPCRASEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRSRSPCRASEA
560 570 580 590 600 610
520 530 540 550 560 570
pF1KSD GGSGSSGRGPALCFEGSPPPEELPAVHSHGAGRGEPWPGPASPSGDQVSTCSLEMNYSSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GGSGSSGRGPALCFEGSPPPEELPAVHSHGAGRGEPWPGPASPSGDQVSTCSLEMNYSSN
620 630 640 650 660 670
580 590 600 610 620 630
pF1KSD SSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCACCCEPQPSPAGPSAGAAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCACCCEPQPSPAGPSAGAAGS
680 690 700 710 720 730
640 650 660 670 680 690
pF1KSD STLFLGPHLYEGSGPAGGEPQSGSSQGLYGLHPDHLPRTDGVKYEGLPCCFYEEKQVARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 STLFLGPHLYEGSGPAGGEPQSGSSQGLYGLHPDHLPRTDGVKYEGLPCCFYEEKQVARG
740 750 760 770 780 790
700 710 720 730 740 750
pF1KSD GGGGSGCYTEDYSVSVQYTLTEEPPPGCYPGARDLSQRIPIIPEDVDCDLGLPSDCQGTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GGGGSGCYTEDYSVSVQYTLTEEPPPGCYPGARDLSQRIPIIPEDVDCDLGLPSDCQGTH
800 810 820 830 840 850
760 770 780 790 800 810
pF1KSD SLGSWGGTRGPDTPRPHRGLGATREEERALCCQARALLRPGCPPEEAGAVRANFPSALQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SLGSWGGTRGPDTPRPHRGLGATREEERALCCQARALLRPGCPPEEAGAVRANFPSALQD
860 870 880 890 900 910
820 830
pF1KSD TQESSTTATEAAGPRSHSADSSSPGA
::::::::::::::::::::::::::
CCDS56 TQESSTTATEAAGPRSHSADSSSPGA
920 930
>>CCDS11607.1 RNF43 gene_id:54894|Hs108|chr17 (783 aa)
initn: 845 init1: 266 opt: 662 Z-score: 477.9 bits: 99.3 E(32554): 2.7e-20
Smith-Waterman score: 919; 31.7% identity (52.9% similar) in 823 aa overlap (2-784:86-782)
10 20 30
pF1KSD MHPLGLCNNNDEEDLYEYGWVGVVKLEQPEL
::: ::: .:...: : :....::::.:.
CCDS11 DPTGKLNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNL-EPGFISIVKLESPRR
60 70 80 90 100 110
40 50 60 70 80 90
pF1KSD DPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKL
:.:::.. .::. : .:::.::.::..:. : .::.: : ::: . : :: ::
CCDS11 APRPCLSLASKARMAGERGASAVLFDITEDRAAAEQLQQ--PLGLTWPVVLIWGNDAEKL
120 130 140 150 160 170
100 110 120 130 140
pF1KSD MNIVNKQKVARARIQHR-PPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQ-N
:..: :.. :..::. . :: : .:. :... .. .. : ...:. . :.:. .
CCDS11 MEFVYKNQKAHVRIELKEPPAWPD--YDVWILMTVVGTIFVIILASVLRIRCRPRHSRPD
180 190 200 210 220 230
150 160 170 180 190 200
pF1KSD SMNRLAVQALEKMETRKFNSKSKGRREGSCGAL-DTLSSSSTSD-CAICLEKYIDGEELR
... .. :. .. ::..... . : : :. :: :.. ::::::.. .:.:::
CCDS11 PLQQRTAWAISQLATRRYQASCRQAR----GEWPDSGSSCSSAPVCAICLEEFSEGQELR
240 250 260 270 280
210 220 230 240 250 260
pF1KSD VIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQRVTLPVH
:: : :.:::.:::::: ::.::: : :: : . ... : :: :. : .
CCDS11 VISCLHEFHRNCVDPWLHQHRTCPLCMFNITEGDSFSQSLGPSRSYQEPGR--RLHLIRQ
290 300 310 320 330 340
270 280 290 300 310 320
pF1KSD YPGRVHRTNAIPAY----PTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYPPLH
.::..: .:: :.:... : .: :. .. : :
CCDS11 HPGHAHYH--LPAAYLLGPSRSAVARPPRP---------------GPFLPSQEPGMGPRH
350 360 370 380
330 340 350 360 370 380
pF1KSD LDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQG--LSYPE
:: :: : : .. .:.: :: : :: ::. .
CCDS11 -------HRFP---RAAHPRAPGEQQRLAGA---------------QHPYAQGWGLSHLQ
390 400 410 420
390 400 410 420 430 440
pF1KSD QEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCSG
. .: : . : :: ::..::: : . : .:: :
CCDS11 STSQHPAA-CPVPLRRARPPDSSGS-----------------GES-----YCTERS---G
430 440 450
450 460 470 480 490 500
pF1KSD YLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRS
:::: :.::::: : :: :::::::.::..: :::.:: ::: ::::::.::..: :
CCDS11 YLADGPASDSSS----GPCHGSSSDSVVNCTDISLQGVHGSSSTFCSSLSSDFDPLVYCS
460 470 480 490 500 510
510 520 530 540 550
pF1KSD RS--PCRASEAGGSGSSGRG-----PALCFEGSPPPEELPAVHSHGAGRGEPWPG--PAS
. : :.. . : :. :. . : . : : : . : : :.
CCDS11 PKGDPQRVDMQPSVTSRPRSLDSVVPTGETQVSSHVHYHRHRHHHYKKRFQ-WHGRKPGP
520 530 540 550 560 570
560 570 580 590 600 610
pF1KSD PSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCAC
.: : . .. . : .:...... : .:::. : . :.:
CCDS11 ETGVPQSRPPIP---RTQPQPEPPSPDQQVTR-----SNSAAPSGRLSN------PQCPR
580 590 600 610
620 630 640 650 660
pF1KSD CC-EPQPSPAGPSAGAAGSSTLF------LG---PHLYEGSGPAGGEPQSGSSQGLYGLH
:: :.:. :. ..:.:: :. :. . .::. :: :: .:
CCDS11 ALPEPAPGPVDASSICPSTSSLFNLQKSSLSARHPQRKRRGGPS--EPTPGSRPQDATVH
620 630 640 650 660 670
670 680 690 700 710
pF1KSD P--DHLPR-TDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCY
: . .:. : .: : : : . . : : . . : : : : ::
CCDS11 PACQIFPHYTPSVAYPWSP----EAHPLICGPPGLD-----------KRLLPETPGP-CY
680 690 700 710
720 730 740 750 760 770
pF1KSD PGARD----LSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTRGPDTPRPH-RGLGA--
... :. : :. :. :.. : .: ..: : :: . :.:
CCDS11 SNSQPVWLCLTPRQPLEPHP-------PGE--GPSEWSS-DTAEGRPCPYPHCQVLSAQP
720 730 740 750 760
780 790 800 810 820 830
pF1KSD -TREEERALCCQARALLRPGCPPEEAGAVRANFPSALQDTQESSTTATEAAGPRSHSADS
..:: . :: ::
CCDS11 GSEEELEELCEQAV
770 780
>>CCDS82172.1 RNF43 gene_id:54894|Hs108|chr17 (656 aa)
initn: 709 init1: 266 opt: 507 Z-score: 369.6 bits: 79.0 E(32554): 2.9e-14
Smith-Waterman score: 764; 30.8% identity (51.2% similar) in 779 aa overlap (46-784:2-655)
20 30 40 50 60 70
pF1KSD YEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDP
: .:::.::.::..:. : .::.:
CCDS82 MAGERGASAVLFDITEDRAAAEQLQQ--PLG
10 20
80 90 100 110 120 130
pF1KSD LKRPVVYVKGADAIKLMNIVNKQKVARARIQHR-PPRQPTEYFDMGIFLAFFVVVSLVCL
: ::: . : :: :::..: :.. :..::. . :: : .:. :... .. .. :
CCDS82 LTWPVVLIWGNDAEKLMEFVYKNQKAHVRIELKEPPAWPD--YDVWILMTVVGTIFVIIL
30 40 50 60 70 80
140 150 160 170 180 190
pF1KSD ILLVKIKLKQRRSQ-NSMNRLAVQALEKMETRKFNSKSKGRREGSCGAL-DTLSSSSTSD
...:. . :.:. . ... .. :. .. ::..... . : : :. :: :..
CCDS82 ASVLRIRCRPRHSRPDPLQQRTAWAISQLATRRYQASCRQAR----GEWPDSGSSCSSAP
90 100 110 120 130 140
200 210 220 230 240 250
pF1KSD -CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVET
::::::.. .:.::::: : :.:::.:::::: ::.::: : :: : . ...
CCDS82 VCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNITEGDSFSQSLGPSR
150 160 170 180 190 200
260 270 280 290 300
pF1KSD SNLSRGRQQRVTLPVHYPGRVHRTNAIPAY----PTRTSMDSHGNPVTLLTMDRHGEQSL
: :: :. : ..::..: .:: :.:... :
CCDS82 SYQEPGR--RLHLIRQHPGHAHYH--LPAAYLLGPSRSAVARPPRP--------------
210 220 230 240
310 320 330 340 350 360
pF1KSD YSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYET
.: :. .. : : :: :: : : .. .:.:
CCDS82 -GPFLPSQEPGMGPRH-------HRFP---RAAHPRAPGEQQRLAGA-------------
250 260 270 280
370 380 390 400 410 420
pF1KSD MYQHYYFQG--LSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGS
:: : :: ::. .. .: : . : :: ::..::: :
CCDS82 --QHPYAQGWGLSHLQSTSQHPAA-CPVPLRRARPPDSSGS-----------------GE
290 300 310 320
430 440 450 460 470 480
pF1KSD TSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCST
. : .:: ::::: :.::: ::: :: :::::::.::..: :::.:: ::
CCDS82 S-----YCTERS---GYLADGPASDS----SSGPCHGSSSDSVVNCTDISLQGVHGSSST
330 340 350 360
490 500 510 520 530
pF1KSD FRSSLSSDYDPFIYRSRS--PCRASEAGGSGSSGRG-----PALCFEGSPPPEELPAVHS
: ::::::.::..: : . : :.. . : :. :. . : . :
CCDS82 FCSSLSSDFDPLVYCSPKGDPQRVDMQPSVTSRPRSLDSVVPTGETQVSSHVHYHRHRHH
370 380 390 400 410 420
540 550 560 570 580 590
pF1KSD HGAGRGEPWPG--PASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPD
: : . : : :. .: : . .. . : .:...... : .:::.
CCDS82 HYKKRFQ-WHGRKPGPETGVPQSRPPIP---RTQPQPEPPSPDQQVTR-----SNSAAPS
430 440 450 460 470 480
600 610 620 630 640
pF1KSD LRRTWKGGHELPSCACCC-EPQPSPAGPSAGAAGSSTLF------LG---PHLYEGSGPA
: . :.: :: :.:. :. ..:.:: :. :. . .::.
CCDS82 GRLSN------PQCPRALPEPAPGPVDASSICPSTSSLFNLQKSSLSARHPQRKRRGGPS
490 500 510 520 530
650 660 670 680 690 700
pF1KSD GGEPQSGSSQGLYGLHP--DHLPR-TDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYS
:: :: .:: . .:. : .: : : : . . : : .
CCDS82 --EPTPGSRPQDATVHPACQIFPHYTPSVAYPWSP----EAHPLICGPPGLD--------
540 550 560 570 580
710 720 730 740 750
pF1KSD VSVQYTLTEEPPPGCYPGARD----LSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTR
. : : : : :: ... :. : :. :. :. .: .: ..
CCDS82 ---KRLLPETPGP-CYSNSQPVWLCLTPRQPLEPHP-------PG--EGPSEWSS-DTAE
590 600 610 620
760 770 780 790 800 810
pF1KSD GPDTPRPH-RGLGA---TREEERALCCQARALLRPGCPPEEAGAVRANFPSALQDTQESS
: : :: . :.: ..:: . :: ::
CCDS82 GRPCPYPHCQVLSAQPGSEEELEELCEQAV
630 640 650
836 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:06:50 2016 done: Thu Nov 3 05:06:51 2016
Total Scan time: 5.150 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]