Result of FASTA (omim) for
pF1KSDA1345
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1345, 1512 aa
1>>>pF1KSDA1345 1512 - 1512 aa - 1512 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.0413+/-0.00043; mu= 11.1429+/- 0.027
mean_var=165.3717+/-31.997, 0's: 0 Z-trim(115.6): 28 B-trim: 0 in 0/56
Lambda= 0.099734
statistics sampled from 26209 (26233) to 26209 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.652), E-opt: 0.2 (0.308), width: 16
Scan time: 18.060
The best scores are: opt bits E(85289)
XP_016863971 (OMIM: 216360,612013,612284,612285) P (1571) 7608 1108.3 0
XP_005248234 (OMIM: 216360,612013,612284,612285) P (1620) 7608 1108.3 0
NP_001073991 (OMIM: 216360,612013,612284,612285) c (1620) 7608 1108.3 0
XP_011512174 (OMIM: 216360,612013,612284,612285) P (1013) 6317 922.4 0
NP_001158192 (OMIM: 216360,612013,612284,612285) c ( 111) 220 44.5 0.00058
XP_011512176 (OMIM: 216360,612013,612284,612285) P ( 111) 220 44.5 0.00058
>>XP_016863971 (OMIM: 216360,612013,612284,612285) PREDI (1571 aa)
initn: 7748 init1: 7608 opt: 7608 Z-score: 5920.7 bits: 1108.3 E(85289): 0
Smith-Waterman score: 9800; 96.2% identity (96.2% similar) in 1544 aa overlap (1-1485:1-1544)
10 20 30 40 50 60
pF1KSD MVSEKSHLGNPQEPVQEEPKTRLLSMTVRRGPRSLPPIPSTSRTGFAEFSMRGRMREKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVSEKSHLGNPQEPVQEEPKTRLLSMTVRRGPRSLPPIPSTSRTGFAEFSMRGRMREKLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD AARSKAESALLQEIPTPRPRRLRSPSKKELETEFGTEPGKEVERTQQEVDSQSYSRVKFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AARSKAESALLQEIPTPRPRRLRSPSKKELETEFGTEPGKEVERTQQEVDSQSYSRVKFH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD DSARKIKPKPQVPPGFPSAEEAYNFFTFNFDPEPEGSEEKPKARHRAGTNQEEEEGEEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSARKIKPKPQVPPGFPSAEEAYNFFTFNFDPEPEGSEEKPKARHRAGTNQEEEEGEEEE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD PPAQGGGKEMDEEELLNGDDAEDFLLGLDHVADDFVAVRPADYESIHDRLQMEREMLFIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPAQGGGKEMDEEELLNGDDAEDFLLGLDHVADDFVAVRPADYESIHDRLQMEREMLFIP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD SRQTVPTYKKLPENVQPRFLEDEGLYTGVRPEVARTNQNIMENRLLMQDPERRWFGDDGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRQTVPTYKKLPENVQPRFLEDEGLYTGVRPEVARTNQNIMENRLLMQDPERRWFGDDGR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD ILALPNPIKPFPSRPPVLTQEQSIKAELETLYKKAVKYVHSSQHVIRSGDPPGNFQLDID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILALPNPIKPFPSRPPVLTQEQSIKAELETLYKKAVKYVHSSQHVIRSGDPPGNFQLDID
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ISGLIFTHHPCFSREHVLAAKLAQLYDQYLARHQRNKAKFLTDKLQALRNAVQTGLDPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISGLIFTHHPCFSREHVLAAKLAQLYDQYLARHQRNKAKFLTDKLQALRNAVQTGLDPEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD PHQSLDTIQKTINEYKSEIRQTRKFRDAEQEKDRTLLKTIIKVWKEMKSLREFQRFTNTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PHQSLDTIQKTINEYKSEIRQTRKFRDAEQEKDRTLLKTIIKVWKEMKSLREFQRFTNTP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LKLVLRKEKADQKADEEAYEAEIQAEISELLEEHTEEYAQKMEEYRTSLQQWKAWRKVQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKLVLRKEKADQKADEEAYEAEIQAEISELLEEHTEEYAQKMEEYRTSLQQWKAWRKVQR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD AKKKKRKQAAEEHPGDEIAEPYPEEDLVKPSPPEPTDRAVIEQEVRERAAQSRRRPWEPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKKKKRKQAAEEHPGDEIAEPYPEEDLVKPSPPEPTDRAVIEQEVRERAAQSRRRPWEPT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD LVPELSLAGSVTPNDQCPRAEVSRREDVKKRSVYLKVLFNNKEVSRTVSRPLGADFRVHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVPELSLAGSVTPNDQCPRAEVSRREDVKKRSVYLKVLFNNKEVSRTVSRPLGADFRVHF
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GQIFNLQIVNWPESLTLQVYETVGHSSPTLLAEVFLPIPETTVVTGRAPTEEVEFSSNQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQIFNLQIVNWPESLTLQVYETVGHSSPTLLAEVFLPIPETTVVTGRAPTEEVEFSSNQH
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD VTLDHEGVGSGVPFSFEADGSNQLTLMTSGKVSHSVAWAIGENGIPLIPPLSQQNIGFRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTLDHEGVGSGVPFSFEADGSNQLTLMTSGKVSHSVAWAIGENGIPLIPPLSQQNIGFRS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD ALKKADAISSIGTSGLTDMKKLAKWAAESKLDPNDPNNAPLMQLISVATSGESYVPDFFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALKKADAISSIGTSGLTDMKKLAKWAAESKLDPNDPNNAPLMQLISVATSGESYVPDFFR
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD LEQLQQEFNFVSDQELNRSKRFRLLHLRSQEVPEFRNYKQVPVYDREIMEKVFQDYEKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEQLQQEFNFVSDQELNRSKRFRLLHLRSQEVPEFRNYKQVPVYDREIMEKVFQDYEKRL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD RDRNVIETKEHIDTHRAIVAKYLQQVRESVINRFLIAKQYFLLADMIVEEEVPNISILGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDRNVIETKEHIDTHRAIVAKYLQQVRESVINRFLIAKQYFLLADMIVEEEVPNISILGL
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD SLFKLAEQKRPLRPRRKGRKKVTAQNLSDGDIKLLVNIVRAYDIPVRKPAVSKFQQPSRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLFKLAEQKRPLRPRRKGRKKVTAQNLSDGDIKLLVNIVRAYDIPVRKPAVSKFQQPSRS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD SRMFSEKHAASPSTYSPTHNADYPLGQVLVRPFVEVSFQRTVCHTTTAEGPNPSWNEELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRMFSEKHAASPSTYSPTHNADYPLGQVLVRPFVEVSFQRTVCHTTTAEGPNPSWNEELE
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD LPFRAPNGDYSTASLQSVKDVVFINIFDEVLHDVLEDDRERGSGIHTRIERHWLGCVKMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPFRAPNGDYSTASLQSVKDVVFINIFDEVLHDVLEDDRERGSGIHTRIERHWLGCVKMP
1090 1100 1110 1120 1130 1140
pF1KSD FSTIYFQAR---------------------------------------------------
:::::::::
XP_016 FSTIYFQARIDGTFKIDIPPVLLGYSKERNMILERGFDSVRSLSEGSYITLFITIEPQLV
1150 1160 1170 1180 1190 1200
1150 1160 1170 1180 1190 1200
pF1KSD --------FESQEDEKLLQATEKFQAECALKFPNRQCLTTVIDISGKTVFITRYLKPLNP
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGESIREKFESQEDEKLLQATEKFQAECALKFPNRQCLTTVIDISGKTVFITRYLKPLNP
1210 1220 1230 1240 1250 1260
1210 1220 1230 1240 1250 1260
pF1KSD PQELLNVYPNNLQATAELVARYVSLIPFLPDTVSFGGICDLWSTSDQFLDLLAGDEEEHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQELLNVYPNNLQATAELVARYVSLIPFLPDTVSFGGICDLWSTSDQFLDLLAGDEEEHA
1270 1280 1290 1300 1310 1320
1270 1280 1290 1300 1310 1320
pF1KSD VLLCNYFLSLGKKAWLLMGNAIPEGPTAYVLTWEQGRYLIWNPCSGHFYGQFDTFCPLKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLLCNYFLSLGKKAWLLMGNAIPEGPTAYVLTWEQGRYLIWNPCSGHFYGQFDTFCPLKN
1330 1340 1350 1360 1370 1380
1330 1340 1350 1360 1370 1380
pF1KSD VGCLIGPDNIWFNIQRYESPLRINFDVTRPKLWKSFFSRSLPYPGLSSVQPEELIYQRSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGCLIGPDNIWFNIQRYESPLRINFDVTRPKLWKSFFSRSLPYPGLSSVQPEELIYQRSD
1390 1400 1410 1420 1430 1440
1390 1400 1410 1420 1430 1440
pF1KSD KAAAAELQDRIEKILKEKIMDWRPRHLTRWNRYCTSTLRHFLPLLEKSQGEDVEDDHRAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAAAAELQDRIEKILKEKIMDWRPRHLTRWNRYCTSTLRHFLPLLEKSQGEDVEDDHRAE
1450 1460 1470 1480 1490 1500
1450 1460 1470 1480 1490 1500
pF1KSD LLKQLGDYRFSGFPLHMPYSEVKPLIDAVYSTGVHNIDVPNVEFALAVYIHPYPKNVLSV
::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLKQLGDYRFSGFPLHMPYSEVKPLIDAVYSTGVHNIDVPNVEFALAVYIHPYPKNVLSV
1510 1520 1530 1540 1550 1560
1510
pF1KSD WIYVASLIRNR
XP_016 WIYVASLIRNR
1570
>>XP_005248234 (OMIM: 216360,612013,612284,612285) PREDI (1620 aa)
initn: 7748 init1: 7608 opt: 7608 Z-score: 5920.5 bits: 1108.3 E(85289): 0
Smith-Waterman score: 9800; 96.2% identity (96.2% similar) in 1544 aa overlap (1-1485:50-1593)
10 20 30
pF1KSD MVSEKSHLGNPQEPVQEEPKTRLLSMTVRR
::::::::::::::::::::::::::::::
XP_005 EDADMGRQNKNSKVRRQPRKKQPPTAVPKEMVSEKSHLGNPQEPVQEEPKTRLLSMTVRR
20 30 40 50 60 70
40 50 60 70 80 90
pF1KSD GPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESALLQEIPTPRPRRLRSPSKKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESALLQEIPTPRPRRLRSPSKKEL
80 90 100 110 120 130
100 110 120 130 140 150
pF1KSD ETEFGTEPGKEVERTQQEVDSQSYSRVKFHDSARKIKPKPQVPPGFPSAEEAYNFFTFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETEFGTEPGKEVERTQQEVDSQSYSRVKFHDSARKIKPKPQVPPGFPSAEEAYNFFTFNF
140 150 160 170 180 190
160 170 180 190 200 210
pF1KSD DPEPEGSEEKPKARHRAGTNQEEEEGEEEEPPAQGGGKEMDEEELLNGDDAEDFLLGLDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DPEPEGSEEKPKARHRAGTNQEEEEGEEEEPPAQGGGKEMDEEELLNGDDAEDFLLGLDH
200 210 220 230 240 250
220 230 240 250 260 270
pF1KSD VADDFVAVRPADYESIHDRLQMEREMLFIPSRQTVPTYKKLPENVQPRFLEDEGLYTGVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VADDFVAVRPADYESIHDRLQMEREMLFIPSRQTVPTYKKLPENVQPRFLEDEGLYTGVR
260 270 280 290 300 310
280 290 300 310 320 330
pF1KSD PEVARTNQNIMENRLLMQDPERRWFGDDGRILALPNPIKPFPSRPPVLTQEQSIKAELET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PEVARTNQNIMENRLLMQDPERRWFGDDGRILALPNPIKPFPSRPPVLTQEQSIKAELET
320 330 340 350 360 370
340 350 360 370 380 390
pF1KSD LYKKAVKYVHSSQHVIRSGDPPGNFQLDIDISGLIFTHHPCFSREHVLAAKLAQLYDQYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LYKKAVKYVHSSQHVIRSGDPPGNFQLDIDISGLIFTHHPCFSREHVLAAKLAQLYDQYL
380 390 400 410 420 430
400 410 420 430 440 450
pF1KSD ARHQRNKAKFLTDKLQALRNAVQTGLDPEKPHQSLDTIQKTINEYKSEIRQTRKFRDAEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARHQRNKAKFLTDKLQALRNAVQTGLDPEKPHQSLDTIQKTINEYKSEIRQTRKFRDAEQ
440 450 460 470 480 490
460 470 480 490 500 510
pF1KSD EKDRTLLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEKADQKADEEAYEAEIQAEISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EKDRTLLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEKADQKADEEAYEAEIQAEISEL
500 510 520 530 540 550
520 530 540 550 560 570
pF1KSD LEEHTEEYAQKMEEYRTSLQQWKAWRKVQRAKKKKRKQAAEEHPGDEIAEPYPEEDLVKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LEEHTEEYAQKMEEYRTSLQQWKAWRKVQRAKKKKRKQAAEEHPGDEIAEPYPEEDLVKP
560 570 580 590 600 610
580 590 600 610 620 630
pF1KSD SPPEPTDRAVIEQEVRERAAQSRRRPWEPTLVPELSLAGSVTPNDQCPRAEVSRREDVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SPPEPTDRAVIEQEVRERAAQSRRRPWEPTLVPELSLAGSVTPNDQCPRAEVSRREDVKK
620 630 640 650 660 670
640 650 660 670 680 690
pF1KSD RSVYLKVLFNNKEVSRTVSRPLGADFRVHFGQIFNLQIVNWPESLTLQVYETVGHSSPTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSVYLKVLFNNKEVSRTVSRPLGADFRVHFGQIFNLQIVNWPESLTLQVYETVGHSSPTL
680 690 700 710 720 730
700 710 720 730 740 750
pF1KSD LAEVFLPIPETTVVTGRAPTEEVEFSSNQHVTLDHEGVGSGVPFSFEADGSNQLTLMTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAEVFLPIPETTVVTGRAPTEEVEFSSNQHVTLDHEGVGSGVPFSFEADGSNQLTLMTSG
740 750 760 770 780 790
760 770 780 790 800 810
pF1KSD KVSHSVAWAIGENGIPLIPPLSQQNIGFRSALKKADAISSIGTSGLTDMKKLAKWAAESK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVSHSVAWAIGENGIPLIPPLSQQNIGFRSALKKADAISSIGTSGLTDMKKLAKWAAESK
800 810 820 830 840 850
820 830 840 850 860 870
pF1KSD LDPNDPNNAPLMQLISVATSGESYVPDFFRLEQLQQEFNFVSDQELNRSKRFRLLHLRSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDPNDPNNAPLMQLISVATSGESYVPDFFRLEQLQQEFNFVSDQELNRSKRFRLLHLRSQ
860 870 880 890 900 910
880 890 900 910 920 930
pF1KSD EVPEFRNYKQVPVYDREIMEKVFQDYEKRLRDRNVIETKEHIDTHRAIVAKYLQQVRESV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVPEFRNYKQVPVYDREIMEKVFQDYEKRLRDRNVIETKEHIDTHRAIVAKYLQQVRESV
920 930 940 950 960 970
940 950 960 970 980 990
pF1KSD INRFLIAKQYFLLADMIVEEEVPNISILGLSLFKLAEQKRPLRPRRKGRKKVTAQNLSDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 INRFLIAKQYFLLADMIVEEEVPNISILGLSLFKLAEQKRPLRPRRKGRKKVTAQNLSDG
980 990 1000 1010 1020 1030
1000 1010 1020 1030 1040 1050
pF1KSD DIKLLVNIVRAYDIPVRKPAVSKFQQPSRSSRMFSEKHAASPSTYSPTHNADYPLGQVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DIKLLVNIVRAYDIPVRKPAVSKFQQPSRSSRMFSEKHAASPSTYSPTHNADYPLGQVLV
1040 1050 1060 1070 1080 1090
1060 1070 1080 1090 1100 1110
pF1KSD RPFVEVSFQRTVCHTTTAEGPNPSWNEELELPFRAPNGDYSTASLQSVKDVVFINIFDEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPFVEVSFQRTVCHTTTAEGPNPSWNEELELPFRAPNGDYSTASLQSVKDVVFINIFDEV
1100 1110 1120 1130 1140 1150
1120 1130 1140
pF1KSD LHDVLEDDRERGSGIHTRIERHWLGCVKMPFSTIYFQAR---------------------
:::::::::::::::::::::::::::::::::::::::
XP_005 LHDVLEDDRERGSGIHTRIERHWLGCVKMPFSTIYFQARIDGTFKIDIPPVLLGYSKERN
1160 1170 1180 1190 1200 1210
1150 1160 1170
pF1KSD --------------------------------------FESQEDEKLLQATEKFQAECAL
::::::::::::::::::::::
XP_005 MILERGFDSVRSLSEGSYITLFITIEPQLVPGESIREKFESQEDEKLLQATEKFQAECAL
1220 1230 1240 1250 1260 1270
1180 1190 1200 1210 1220 1230
pF1KSD KFPNRQCLTTVIDISGKTVFITRYLKPLNPPQELLNVYPNNLQATAELVARYVSLIPFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KFPNRQCLTTVIDISGKTVFITRYLKPLNPPQELLNVYPNNLQATAELVARYVSLIPFLP
1280 1290 1300 1310 1320 1330
1240 1250 1260 1270 1280 1290
pF1KSD DTVSFGGICDLWSTSDQFLDLLAGDEEEHAVLLCNYFLSLGKKAWLLMGNAIPEGPTAYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DTVSFGGICDLWSTSDQFLDLLAGDEEEHAVLLCNYFLSLGKKAWLLMGNAIPEGPTAYV
1340 1350 1360 1370 1380 1390
1300 1310 1320 1330 1340 1350
pF1KSD LTWEQGRYLIWNPCSGHFYGQFDTFCPLKNVGCLIGPDNIWFNIQRYESPLRINFDVTRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTWEQGRYLIWNPCSGHFYGQFDTFCPLKNVGCLIGPDNIWFNIQRYESPLRINFDVTRP
1400 1410 1420 1430 1440 1450
1360 1370 1380 1390 1400 1410
pF1KSD KLWKSFFSRSLPYPGLSSVQPEELIYQRSDKAAAAELQDRIEKILKEKIMDWRPRHLTRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLWKSFFSRSLPYPGLSSVQPEELIYQRSDKAAAAELQDRIEKILKEKIMDWRPRHLTRW
1460 1470 1480 1490 1500 1510
1420 1430 1440 1450 1460 1470
pF1KSD NRYCTSTLRHFLPLLEKSQGEDVEDDHRAELLKQLGDYRFSGFPLHMPYSEVKPLIDAVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NRYCTSTLRHFLPLLEKSQGEDVEDDHRAELLKQLGDYRFSGFPLHMPYSEVKPLIDAVY
1520 1530 1540 1550 1560 1570
1480 1490 1500 1510
pF1KSD STGVHNIDVPNVEFALAVYIHPYPKNVLSVWIYVASLIRNR
::::::::::::::
XP_005 STGVHNIDVPNVEFALAVYIHPYPKNVLSVWIYVASLIRNR
1580 1590 1600 1610 1620
>>NP_001073991 (OMIM: 216360,612013,612284,612285) coile (1620 aa)
initn: 7748 init1: 7608 opt: 7608 Z-score: 5920.5 bits: 1108.3 E(85289): 0
Smith-Waterman score: 9800; 96.2% identity (96.2% similar) in 1544 aa overlap (1-1485:50-1593)
10 20 30
pF1KSD MVSEKSHLGNPQEPVQEEPKTRLLSMTVRR
::::::::::::::::::::::::::::::
NP_001 EDADMGRQNKNSKVRRQPRKKQPPTAVPKEMVSEKSHLGNPQEPVQEEPKTRLLSMTVRR
20 30 40 50 60 70
40 50 60 70 80 90
pF1KSD GPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESALLQEIPTPRPRRLRSPSKKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESALLQEIPTPRPRRLRSPSKKEL
80 90 100 110 120 130
100 110 120 130 140 150
pF1KSD ETEFGTEPGKEVERTQQEVDSQSYSRVKFHDSARKIKPKPQVPPGFPSAEEAYNFFTFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETEFGTEPGKEVERTQQEVDSQSYSRVKFHDSARKIKPKPQVPPGFPSAEEAYNFFTFNF
140 150 160 170 180 190
160 170 180 190 200 210
pF1KSD DPEPEGSEEKPKARHRAGTNQEEEEGEEEEPPAQGGGKEMDEEELLNGDDAEDFLLGLDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPEPEGSEEKPKARHRAGTNQEEEEGEEEEPPAQGGGKEMDEEELLNGDDAEDFLLGLDH
200 210 220 230 240 250
220 230 240 250 260 270
pF1KSD VADDFVAVRPADYESIHDRLQMEREMLFIPSRQTVPTYKKLPENVQPRFLEDEGLYTGVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VADDFVAVRPADYESIHDRLQMEREMLFIPSRQTVPTYKKLPENVQPRFLEDEGLYTGVR
260 270 280 290 300 310
280 290 300 310 320 330
pF1KSD PEVARTNQNIMENRLLMQDPERRWFGDDGRILALPNPIKPFPSRPPVLTQEQSIKAELET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEVARTNQNIMENRLLMQDPERRWFGDDGRILALPNPIKPFPSRPPVLTQEQSIKAELET
320 330 340 350 360 370
340 350 360 370 380 390
pF1KSD LYKKAVKYVHSSQHVIRSGDPPGNFQLDIDISGLIFTHHPCFSREHVLAAKLAQLYDQYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYKKAVKYVHSSQHVIRSGDPPGNFQLDIDISGLIFTHHPCFSREHVLAAKLAQLYDQYL
380 390 400 410 420 430
400 410 420 430 440 450
pF1KSD ARHQRNKAKFLTDKLQALRNAVQTGLDPEKPHQSLDTIQKTINEYKSEIRQTRKFRDAEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARHQRNKAKFLTDKLQALRNAVQTGLDPEKPHQSLDTIQKTINEYKSEIRQTRKFRDAEQ
440 450 460 470 480 490
460 470 480 490 500 510
pF1KSD EKDRTLLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEKADQKADEEAYEAEIQAEISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKDRTLLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEKADQKADEEAYEAEIQAEISEL
500 510 520 530 540 550
520 530 540 550 560 570
pF1KSD LEEHTEEYAQKMEEYRTSLQQWKAWRKVQRAKKKKRKQAAEEHPGDEIAEPYPEEDLVKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEEHTEEYAQKMEEYRTSLQQWKAWRKVQRAKKKKRKQAAEEHPGDEIAEPYPEEDLVKP
560 570 580 590 600 610
580 590 600 610 620 630
pF1KSD SPPEPTDRAVIEQEVRERAAQSRRRPWEPTLVPELSLAGSVTPNDQCPRAEVSRREDVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPPEPTDRAVIEQEVRERAAQSRRRPWEPTLVPELSLAGSVTPNDQCPRAEVSRREDVKK
620 630 640 650 660 670
640 650 660 670 680 690
pF1KSD RSVYLKVLFNNKEVSRTVSRPLGADFRVHFGQIFNLQIVNWPESLTLQVYETVGHSSPTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSVYLKVLFNNKEVSRTVSRPLGADFRVHFGQIFNLQIVNWPESLTLQVYETVGHSSPTL
680 690 700 710 720 730
700 710 720 730 740 750
pF1KSD LAEVFLPIPETTVVTGRAPTEEVEFSSNQHVTLDHEGVGSGVPFSFEADGSNQLTLMTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAEVFLPIPETTVVTGRAPTEEVEFSSNQHVTLDHEGVGSGVPFSFEADGSNQLTLMTSG
740 750 760 770 780 790
760 770 780 790 800 810
pF1KSD KVSHSVAWAIGENGIPLIPPLSQQNIGFRSALKKADAISSIGTSGLTDMKKLAKWAAESK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVSHSVAWAIGENGIPLIPPLSQQNIGFRSALKKADAISSIGTSGLTDMKKLAKWAAESK
800 810 820 830 840 850
820 830 840 850 860 870
pF1KSD LDPNDPNNAPLMQLISVATSGESYVPDFFRLEQLQQEFNFVSDQELNRSKRFRLLHLRSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDPNDPNNAPLMQLISVATSGESYVPDFFRLEQLQQEFNFVSDQELNRSKRFRLLHLRSQ
860 870 880 890 900 910
880 890 900 910 920 930
pF1KSD EVPEFRNYKQVPVYDREIMEKVFQDYEKRLRDRNVIETKEHIDTHRAIVAKYLQQVRESV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVPEFRNYKQVPVYDREIMEKVFQDYEKRLRDRNVIETKEHIDTHRAIVAKYLQQVRESV
920 930 940 950 960 970
940 950 960 970 980 990
pF1KSD INRFLIAKQYFLLADMIVEEEVPNISILGLSLFKLAEQKRPLRPRRKGRKKVTAQNLSDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INRFLIAKQYFLLADMIVEEEVPNISILGLSLFKLAEQKRPLRPRRKGRKKVTAQNLSDG
980 990 1000 1010 1020 1030
1000 1010 1020 1030 1040 1050
pF1KSD DIKLLVNIVRAYDIPVRKPAVSKFQQPSRSSRMFSEKHAASPSTYSPTHNADYPLGQVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DIKLLVNIVRAYDIPVRKPAVSKFQQPSRSSRMFSEKHAASPSTYSPTHNADYPLGQVLV
1040 1050 1060 1070 1080 1090
1060 1070 1080 1090 1100 1110
pF1KSD RPFVEVSFQRTVCHTTTAEGPNPSWNEELELPFRAPNGDYSTASLQSVKDVVFINIFDEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPFVEVSFQRTVCHTTTAEGPNPSWNEELELPFRAPNGDYSTASLQSVKDVVFINIFDEV
1100 1110 1120 1130 1140 1150
1120 1130 1140
pF1KSD LHDVLEDDRERGSGIHTRIERHWLGCVKMPFSTIYFQAR---------------------
:::::::::::::::::::::::::::::::::::::::
NP_001 LHDVLEDDRERGSGIHTRIERHWLGCVKMPFSTIYFQARIDGTFKIDIPPVLLGYSKERN
1160 1170 1180 1190 1200 1210
1150 1160 1170
pF1KSD --------------------------------------FESQEDEKLLQATEKFQAECAL
::::::::::::::::::::::
NP_001 MILERGFDSVRSLSEGSYITLFITIEPQLVPGESIREKFESQEDEKLLQATEKFQAECAL
1220 1230 1240 1250 1260 1270
1180 1190 1200 1210 1220 1230
pF1KSD KFPNRQCLTTVIDISGKTVFITRYLKPLNPPQELLNVYPNNLQATAELVARYVSLIPFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFPNRQCLTTVIDISGKTVFITRYLKPLNPPQELLNVYPNNLQATAELVARYVSLIPFLP
1280 1290 1300 1310 1320 1330
1240 1250 1260 1270 1280 1290
pF1KSD DTVSFGGICDLWSTSDQFLDLLAGDEEEHAVLLCNYFLSLGKKAWLLMGNAIPEGPTAYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DTVSFGGICDLWSTSDQFLDLLAGDEEEHAVLLCNYFLSLGKKAWLLMGNAIPEGPTAYV
1340 1350 1360 1370 1380 1390
1300 1310 1320 1330 1340 1350
pF1KSD LTWEQGRYLIWNPCSGHFYGQFDTFCPLKNVGCLIGPDNIWFNIQRYESPLRINFDVTRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTWEQGRYLIWNPCSGHFYGQFDTFCPLKNVGCLIGPDNIWFNIQRYESPLRINFDVTRP
1400 1410 1420 1430 1440 1450
1360 1370 1380 1390 1400 1410
pF1KSD KLWKSFFSRSLPYPGLSSVQPEELIYQRSDKAAAAELQDRIEKILKEKIMDWRPRHLTRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLWKSFFSRSLPYPGLSSVQPEELIYQRSDKAAAAELQDRIEKILKEKIMDWRPRHLTRW
1460 1470 1480 1490 1500 1510
1420 1430 1440 1450 1460 1470
pF1KSD NRYCTSTLRHFLPLLEKSQGEDVEDDHRAELLKQLGDYRFSGFPLHMPYSEVKPLIDAVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRYCTSTLRHFLPLLEKSQGEDVEDDHRAELLKQLGDYRFSGFPLHMPYSEVKPLIDAVY
1520 1530 1540 1550 1560 1570
1480 1490 1500 1510
pF1KSD STGVHNIDVPNVEFALAVYIHPYPKNVLSVWIYVASLIRNR
::::::::::::::
NP_001 STGVHNIDVPNVEFALAVYIHPYPKNVLSVWIYVASLIRNR
1580 1590 1600 1610 1620
>>XP_011512174 (OMIM: 216360,612013,612284,612285) PREDI (1013 aa)
initn: 6545 init1: 6317 opt: 6317 Z-score: 4919.5 bits: 922.4 E(85289): 0
Smith-Waterman score: 6317; 99.7% identity (99.8% similar) in 960 aa overlap (1-960:50-1009)
10 20 30
pF1KSD MVSEKSHLGNPQEPVQEEPKTRLLSMTVRR
::::::::::::::::::::::::::::::
XP_011 EDADMGRQNKNSKVRRQPRKKQPPTAVPKEMVSEKSHLGNPQEPVQEEPKTRLLSMTVRR
20 30 40 50 60 70
40 50 60 70 80 90
pF1KSD GPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESALLQEIPTPRPRRLRSPSKKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESALLQEIPTPRPRRLRSPSKKEL
80 90 100 110 120 130
100 110 120 130 140 150
pF1KSD ETEFGTEPGKEVERTQQEVDSQSYSRVKFHDSARKIKPKPQVPPGFPSAEEAYNFFTFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETEFGTEPGKEVERTQQEVDSQSYSRVKFHDSARKIKPKPQVPPGFPSAEEAYNFFTFNF
140 150 160 170 180 190
160 170 180 190 200 210
pF1KSD DPEPEGSEEKPKARHRAGTNQEEEEGEEEEPPAQGGGKEMDEEELLNGDDAEDFLLGLDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPEPEGSEEKPKARHRAGTNQEEEEGEEEEPPAQGGGKEMDEEELLNGDDAEDFLLGLDH
200 210 220 230 240 250
220 230 240 250 260 270
pF1KSD VADDFVAVRPADYESIHDRLQMEREMLFIPSRQTVPTYKKLPENVQPRFLEDEGLYTGVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VADDFVAVRPADYESIHDRLQMEREMLFIPSRQTVPTYKKLPENVQPRFLEDEGLYTGVR
260 270 280 290 300 310
280 290 300 310 320 330
pF1KSD PEVARTNQNIMENRLLMQDPERRWFGDDGRILALPNPIKPFPSRPPVLTQEQSIKAELET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEVARTNQNIMENRLLMQDPERRWFGDDGRILALPNPIKPFPSRPPVLTQEQSIKAELET
320 330 340 350 360 370
340 350 360 370 380 390
pF1KSD LYKKAVKYVHSSQHVIRSGDPPGNFQLDIDISGLIFTHHPCFSREHVLAAKLAQLYDQYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LYKKAVKYVHSSQHVIRSGDPPGNFQLDIDISGLIFTHHPCFSREHVLAAKLAQLYDQYL
380 390 400 410 420 430
400 410 420 430 440 450
pF1KSD ARHQRNKAKFLTDKLQALRNAVQTGLDPEKPHQSLDTIQKTINEYKSEIRQTRKFRDAEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARHQRNKAKFLTDKLQALRNAVQTGLDPEKPHQSLDTIQKTINEYKSEIRQTRKFRDAEQ
440 450 460 470 480 490
460 470 480 490 500 510
pF1KSD EKDRTLLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEKADQKADEEAYEAEIQAEISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKDRTLLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEKADQKADEEAYEAEIQAEISEL
500 510 520 530 540 550
520 530 540 550 560 570
pF1KSD LEEHTEEYAQKMEEYRTSLQQWKAWRKVQRAKKKKRKQAAEEHPGDEIAEPYPEEDLVKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEEHTEEYAQKMEEYRTSLQQWKAWRKVQRAKKKKRKQAAEEHPGDEIAEPYPEEDLVKP
560 570 580 590 600 610
580 590 600 610 620 630
pF1KSD SPPEPTDRAVIEQEVRERAAQSRRRPWEPTLVPELSLAGSVTPNDQCPRAEVSRREDVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPPEPTDRAVIEQEVRERAAQSRRRPWEPTLVPELSLAGSVTPNDQCPRAEVSRREDVKK
620 630 640 650 660 670
640 650 660 670 680 690
pF1KSD RSVYLKVLFNNKEVSRTVSRPLGADFRVHFGQIFNLQIVNWPESLTLQVYETVGHSSPTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSVYLKVLFNNKEVSRTVSRPLGADFRVHFGQIFNLQIVNWPESLTLQVYETVGHSSPTL
680 690 700 710 720 730
700 710 720 730 740 750
pF1KSD LAEVFLPIPETTVVTGRAPTEEVEFSSNQHVTLDHEGVGSGVPFSFEADGSNQLTLMTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAEVFLPIPETTVVTGRAPTEEVEFSSNQHVTLDHEGVGSGVPFSFEADGSNQLTLMTSG
740 750 760 770 780 790
760 770 780 790 800 810
pF1KSD KVSHSVAWAIGENGIPLIPPLSQQNIGFRSALKKADAISSIGTSGLTDMKKLAKWAAESK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVSHSVAWAIGENGIPLIPPLSQQNIGFRSALKKADAISSIGTSGLTDMKKLAKWAAESK
800 810 820 830 840 850
820 830 840 850 860 870
pF1KSD LDPNDPNNAPLMQLISVATSGESYVPDFFRLEQLQQEFNFVSDQELNRSKRFRLLHLRSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDPNDPNNAPLMQLISVATSGESYVPDFFRLEQLQQEFNFVSDQELNRSKRFRLLHLRSQ
860 870 880 890 900 910
880 890 900 910 920 930
pF1KSD EVPEFRNYKQVPVYDREIMEKVFQDYEKRLRDRNVIETKEHIDTHRAIVAKYLQQVRESV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EVPEFRNYKQVPVYDREIMEKVFQDYEKRLRDRNVIETKEHIDTHRAIVAKYLQQVRESV
920 930 940 950 960 970
940 950 960 970 980 990
pF1KSD INRFLIAKQYFLLADMIVEEEVPNISILGLSLFKLAEQKRPLRPRRKGRKKVTAQNLSDG
::::::::::::::::::::::::: .: :
XP_011 INRFLIAKQYFLLADMIVEEEVPNIRVLILFCNH
980 990 1000 1010
>>NP_001158192 (OMIM: 216360,612013,612284,612285) coile (111 aa)
initn: 243 init1: 220 opt: 220 Z-score: 192.2 bits: 44.5 E(85289): 0.00058
Smith-Waterman score: 220; 100.0% identity (100.0% similar) in 33 aa overlap (1-33:50-82)
10 20 30
pF1KSD MVSEKSHLGNPQEPVQEEPKTRLLSMTVRR
::::::::::::::::::::::::::::::
NP_001 EDADMGRQNKNSKVRRQPRKKQPPTAVPKEMVSEKSHLGNPQEPVQEEPKTRLLSMTVRR
20 30 40 50 60 70
40 50 60 70 80 90
pF1KSD GPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESALLQEIPTPRPRRLRSPSKKEL
:::
NP_001 GPRRELVVKKSLGRPGTVTHVCNPSTLEGRGG
80 90 100 110
>>XP_011512176 (OMIM: 216360,612013,612284,612285) PREDI (111 aa)
initn: 243 init1: 220 opt: 220 Z-score: 192.2 bits: 44.5 E(85289): 0.00058
Smith-Waterman score: 220; 100.0% identity (100.0% similar) in 33 aa overlap (1-33:50-82)
10 20 30
pF1KSD MVSEKSHLGNPQEPVQEEPKTRLLSMTVRR
::::::::::::::::::::::::::::::
XP_011 EDADMGRQNKNSKVRRQPRKKQPPTAVPKEMVSEKSHLGNPQEPVQEEPKTRLLSMTVRR
20 30 40 50 60 70
40 50 60 70 80 90
pF1KSD GPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESALLQEIPTPRPRRLRSPSKKEL
:::
XP_011 GPRRELVVKKSLGRPGTVTHVCNPSTLEGRGG
80 90 100 110
1512 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:54:50 2016 done: Thu Nov 3 05:54:53 2016
Total Scan time: 18.060 Total Display time: 0.300
Function used was FASTA [36.3.4 Apr, 2011]