Result of FASTA (omim) for
pF1KSDA1360
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1360, 794 aa
1>>>pF1KSDA1360 794 - 794 aa - 794 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.4650+/-0.00047; mu= 1.8342+/- 0.029
mean_var=258.4733+/-57.088, 0's: 0 Z-trim(115.5): 49 B-trim: 1708 in 2/56
Lambda= 0.079775
statistics sampled from 25990 (26036) to 25990 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.305), width: 16
Scan time: 13.340
The best scores are: opt bits E(85289)
NP_001317183 (OMIM: 616365) SCY1-like protein 2 is ( 933) 5193 612.0 3.6e-174
NP_001317182 (OMIM: 616365) SCY1-like protein 2 is ( 933) 5193 612.0 3.6e-174
NP_001304713 (OMIM: 616365) SCY1-like protein 2 is ( 929) 5151 607.2 1e-172
NP_060458 (OMIM: 616365) SCY1-like protein 2 isofo ( 929) 5151 607.2 1e-172
NP_001317185 (OMIM: 616365) SCY1-like protein 2 is ( 760) 5001 589.9 1.4e-167
XP_016873522 (OMIM: 607982,616719) PREDICTED: N-te ( 648) 248 42.8 0.0057
XP_016873521 (OMIM: 607982,616719) PREDICTED: N-te ( 714) 248 42.8 0.0062
>>NP_001317183 (OMIM: 616365) SCY1-like protein 2 isofor (933 aa)
initn: 5193 init1: 5193 opt: 5193 Z-score: 3247.9 bits: 612.0 E(85289): 3.6e-174
Smith-Waterman score: 5193; 99.6% identity (99.7% similar) in 794 aa overlap (1-794:140-933)
10 20 30
pF1KSD MSGDIGDYKLYDVETKYGLLQVSEGLSFLH
.: :: ::::::::::::::::::::::::
NP_001 ESRDCLAFCTEPVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLH
110 120 130 140 150 160
40 50 60 70 80 90
pF1KSD SSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPN
170 180 190 200 210 220
100 110 120 130 140 150
pF1KSD PEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLG
230 240 250 260 270 280
160 170 180 190 200 210
pF1KSD SSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQK
290 300 310 320 330 340
220 230 240 250 260 270
pF1KSD SQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLI
350 360 370 380 390 400
280 290 300 310 320 330
pF1KSD LPELGPVFKQQEPIQASNMILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPELGPVFKQQEPIQASNMILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQ
410 420 430 440 450 460
340 350 360 370 380 390
pF1KSD ELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVL
470 480 490 500 510 520
400 410 420 430 440 450
pF1KSD DDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNL
530 540 550 560 570 580
460 470 480 490 500 510
pF1KSD NQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQI
590 600 610 620 630 640
520 530 540 550 560 570
pF1KSD DKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQ
650 660 670 680 690 700
580 590 600 610 620 630
pF1KSD VHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNT
710 720 730 740 750 760
640 650 660 670 680 690
pF1KSD KRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPA
770 780 790 800 810 820
700 710 720 730 740 750
pF1KSD GAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQ
830 840 850 860 870 880
760 770 780 790
pF1KSD MNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG
::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG
890 900 910 920 930
>>NP_001317182 (OMIM: 616365) SCY1-like protein 2 isofor (933 aa)
initn: 5193 init1: 5193 opt: 5193 Z-score: 3247.9 bits: 612.0 E(85289): 3.6e-174
Smith-Waterman score: 5193; 99.6% identity (99.7% similar) in 794 aa overlap (1-794:140-933)
10 20 30
pF1KSD MSGDIGDYKLYDVETKYGLLQVSEGLSFLH
.: :: ::::::::::::::::::::::::
NP_001 ESRDCLAFCTEPVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLH
110 120 130 140 150 160
40 50 60 70 80 90
pF1KSD SSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPN
170 180 190 200 210 220
100 110 120 130 140 150
pF1KSD PEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLG
230 240 250 260 270 280
160 170 180 190 200 210
pF1KSD SSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQK
290 300 310 320 330 340
220 230 240 250 260 270
pF1KSD SQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLI
350 360 370 380 390 400
280 290 300 310 320 330
pF1KSD LPELGPVFKQQEPIQASNMILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPELGPVFKQQEPIQASNMILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQ
410 420 430 440 450 460
340 350 360 370 380 390
pF1KSD ELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVL
470 480 490 500 510 520
400 410 420 430 440 450
pF1KSD DDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNL
530 540 550 560 570 580
460 470 480 490 500 510
pF1KSD NQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQI
590 600 610 620 630 640
520 530 540 550 560 570
pF1KSD DKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQ
650 660 670 680 690 700
580 590 600 610 620 630
pF1KSD VHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNT
710 720 730 740 750 760
640 650 660 670 680 690
pF1KSD KRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPA
770 780 790 800 810 820
700 710 720 730 740 750
pF1KSD GAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQ
830 840 850 860 870 880
760 770 780 790
pF1KSD MNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG
::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG
890 900 910 920 930
>>NP_001304713 (OMIM: 616365) SCY1-like protein 2 isofor (929 aa)
initn: 5155 init1: 3281 opt: 5151 Z-score: 3221.8 bits: 607.2 E(85289): 1e-172
Smith-Waterman score: 5151; 99.1% identity (99.2% similar) in 794 aa overlap (1-794:140-929)
10 20 30
pF1KSD MSGDIGDYKLYDVETKYGLLQVSEGLSFLH
.: :: ::::::::::::::::::::::::
NP_001 ESRDCLAFCTEPVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLH
110 120 130 140 150 160
40 50 60 70 80 90
pF1KSD SSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPN
170 180 190 200 210 220
100 110 120 130 140 150
pF1KSD PEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLG
230 240 250 260 270 280
160 170 180 190 200 210
pF1KSD SSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQK
290 300 310 320 330 340
220 230 240 250 260 270
pF1KSD SQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLI
350 360 370 380 390 400
280 290 300 310 320 330
pF1KSD LPELGPVFKQQEPIQASNMILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQ
::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_001 LPELGPVFKQQEPIQ----ILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQ
410 420 430 440 450 460
340 350 360 370 380 390
pF1KSD ELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVL
470 480 490 500 510 520
400 410 420 430 440 450
pF1KSD DDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNL
530 540 550 560 570 580
460 470 480 490 500 510
pF1KSD NQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQI
590 600 610 620 630 640
520 530 540 550 560 570
pF1KSD DKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQ
650 660 670 680 690 700
580 590 600 610 620 630
pF1KSD VHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNT
710 720 730 740 750 760
640 650 660 670 680 690
pF1KSD KRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPA
770 780 790 800 810 820
700 710 720 730 740 750
pF1KSD GAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQ
830 840 850 860 870 880
760 770 780 790
pF1KSD MNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG
::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG
890 900 910 920
>>NP_060458 (OMIM: 616365) SCY1-like protein 2 isoform 1 (929 aa)
initn: 5155 init1: 3281 opt: 5151 Z-score: 3221.8 bits: 607.2 E(85289): 1e-172
Smith-Waterman score: 5151; 99.1% identity (99.2% similar) in 794 aa overlap (1-794:140-929)
10 20 30
pF1KSD MSGDIGDYKLYDVETKYGLLQVSEGLSFLH
.: :: ::::::::::::::::::::::::
NP_060 ESRDCLAFCTEPVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLH
110 120 130 140 150 160
40 50 60 70 80 90
pF1KSD SSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPN
170 180 190 200 210 220
100 110 120 130 140 150
pF1KSD PEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLG
230 240 250 260 270 280
160 170 180 190 200 210
pF1KSD SSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQK
290 300 310 320 330 340
220 230 240 250 260 270
pF1KSD SQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLI
350 360 370 380 390 400
280 290 300 310 320 330
pF1KSD LPELGPVFKQQEPIQASNMILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQ
::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_060 LPELGPVFKQQEPIQ----ILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQ
410 420 430 440 450 460
340 350 360 370 380 390
pF1KSD ELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVL
470 480 490 500 510 520
400 410 420 430 440 450
pF1KSD DDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNL
530 540 550 560 570 580
460 470 480 490 500 510
pF1KSD NQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQI
590 600 610 620 630 640
520 530 540 550 560 570
pF1KSD DKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQ
650 660 670 680 690 700
580 590 600 610 620 630
pF1KSD VHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNT
710 720 730 740 750 760
640 650 660 670 680 690
pF1KSD KRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 KRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPA
770 780 790 800 810 820
700 710 720 730 740 750
pF1KSD GAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 GAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQ
830 840 850 860 870 880
760 770 780 790
pF1KSD MNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG
::::::::::::::::::::::::::::::::::::::::::::
NP_060 MNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG
890 900 910 920
>>NP_001317185 (OMIM: 616365) SCY1-like protein 2 isofor (760 aa)
initn: 5001 init1: 5001 opt: 5001 Z-score: 3129.7 bits: 589.9 E(85289): 1.4e-167
Smith-Waterman score: 5001; 100.0% identity (100.0% similar) in 760 aa overlap (35-794:1-760)
10 20 30 40 50 60
pF1KSD IGDYKLYDVETKYGLLQVSEGLSFLHSSVKMVHGNITPENIILNKSGAWKIMGFDFCVSS
::::::::::::::::::::::::::::::
NP_001 MVHGNITPENIILNKSGAWKIMGFDFCVSS
10 20 30
70 80 90 100 110 120
pF1KSD TNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILSVSCETASDMYSLGTVMYAVFNKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILSVSCETASDMYSLGTVMYAVFNKG
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD KPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD IPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNP
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD DMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQEPIQASNMILLIFLQKMDLLLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQEPIQASNMILLIFLQKMDLLLTK
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD TPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQT
280 290 300 310 320 330
370 380 390 400 410 420
pF1KSD SSLAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSLAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKL
340 350 360 370 380 390
430 440 450 460 470 480
pF1KSD GITKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GITKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQ
400 410 420 430 440 450
490 500 510 520 530 540
pF1KSD QKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGSESENKEDGLQNKHKRASLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGSESENKEDGLQNKHKRASLT
460 470 480 490 500 510
550 560 570 580 590 600
pF1KSD LEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPK
520 530 540 550 560 570
610 620 630 640 650 660
pF1KSD SSASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPS
580 590 600 610 620 630
670 680 690 700 710 720
pF1KSD TVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQ
640 650 660 670 680 690
730 740 750 760 770 780
pF1KSD KPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSS
700 710 720 730 740 750
790
pF1KSD ASNDLKDLFG
::::::::::
NP_001 ASNDLKDLFG
760
>>XP_016873522 (OMIM: 607982,616719) PREDICTED: N-termin (648 aa)
initn: 183 init1: 89 opt: 248 Z-score: 174.3 bits: 42.8 E(85289): 0.0057
Smith-Waterman score: 313; 21.8% identity (52.0% similar) in 444 aa overlap (45-478:4-407)
20 30 40 50 60 70
pF1KSD TKYGLLQVSEGLSFLHSSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKF
......: ::. :.:. :. . . :.
XP_016 MAAVFVDRAGEWKLGGLDYMYSAQGNGGGPPR-
10 20 30
80 90 100 110 120 130
pF1KSD PCKEWDPNLPSLCLPNPEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQD
..: : .: :: : . ..::. :: ... ::: :
XP_016 ------KGIPELEQYDPPELADSSGRVVREKWSADMWRLGCLIWEVFNGPLP--------
40 50 60 70
140 150 160 170 180
pF1KSD IYKSFSRQLDQLSRLGSSSLTNIPEEVREHVKLLLNVTPTVRPDAD---QMTKIP--FFD
. : :. ::. . : :....: :::. : . : :..
XP_016 -------RAAALRNPGK-----IPKTLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMS
80 90 100 110 120
190 200 210 220 230 240
pF1KSD DVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPF
. . : ... . .. .:..::. : : : .:. ...:: : . : .
XP_016 NRFVETNLFLEEIQIKEPAEKQKFFQELSKSLDAFPEDFCRHKVLPQLLTAFEFGNAGAV
130 140 150 160 170 180
250 260 270 280 290 300
pF1KSD VLPNVLLIAEECTKEEYVKLILPELGPVFKQQEPIQASNMILLIFLQKMDLLLTKTPPDE
:: .. ... . ::: . :.: . .:.. . . . .::.:. ..
XP_016 VLTPLFKVGKFLSAEEYQQKIIPVVVKMFSSTD-----RAMRIRLLQQMEQFIQYLDEPT
190 200 210 220 230 240
310 320 330 340 350 360
pF1KSD IKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAV
......: : ... . :.: .. . .: .. ... :. .. . . .
XP_016 VNTQIFPHVVHGFLDTNPAIREQTVKSMLLLAPKLNEANLNVELMKHFARLQAKDEQGPI
250 260 270 280 290 300
370 380 390 400 410 420
pF1KSD RVNSLVCLGKILEYLD---KWFVLDDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGI
: :. :::::: ::. . :: . . . : :. . :.::. ::. ..
XP_016 RCNTTVCLGKIGSYLSASTRHRVLTSAFSRATRDPFA-PSRVAGVLGFAA---THNLYSM
310 320 330 340 350
430 440 450 460 470 480
pF1KSD TKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLNRLES--EHKTKLEQLHIMQEQ
. . : :.:: : :... . .. .. ...:. .:..::: : :.::..
XP_016 N--DCAQKILPVLCGLTVDPEKSVR--DQAFKAIRSFLSKLESVSEDPTQLEEVEKDVHA
360 370 380 390 400 410
490 500 510 520 530 540
pF1KSD QKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGSESENKEDGLQNKHKRASLT
XP_016 ASSPGMGGAAASWAGWAVTGVSSLTSKLIRSHPTTAPTETNIPQRPTPEGHWETQEEDKD
420 430 440 450 460 470
>>XP_016873521 (OMIM: 607982,616719) PREDICTED: N-termin (714 aa)
initn: 183 init1: 89 opt: 248 Z-score: 173.7 bits: 42.8 E(85289): 0.0062
Smith-Waterman score: 313; 21.8% identity (52.0% similar) in 444 aa overlap (45-478:4-407)
20 30 40 50 60 70
pF1KSD TKYGLLQVSEGLSFLHSSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKF
......: ::. :.:. :. . . :.
XP_016 MAAVFVDRAGEWKLGGLDYMYSAQGNGGGPPR-
10 20 30
80 90 100 110 120 130
pF1KSD PCKEWDPNLPSLCLPNPEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQD
..: : .: :: : . ..::. :: ... ::: :
XP_016 ------KGIPELEQYDPPELADSSGRVVREKWSADMWRLGCLIWEVFNGPLP--------
40 50 60 70
140 150 160 170 180
pF1KSD IYKSFSRQLDQLSRLGSSSLTNIPEEVREHVKLLLNVTPTVRPDAD---QMTKIP--FFD
. : :. ::. . : :....: :::. : . : :..
XP_016 -------RAAALRNPGK-----IPKTLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMS
80 90 100 110 120
190 200 210 220 230 240
pF1KSD DVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPF
. . : ... . .. .:..::. : : : .:. ...:: : . : .
XP_016 NRFVETNLFLEEIQIKEPAEKQKFFQELSKSLDAFPEDFCRHKVLPQLLTAFEFGNAGAV
130 140 150 160 170 180
250 260 270 280 290 300
pF1KSD VLPNVLLIAEECTKEEYVKLILPELGPVFKQQEPIQASNMILLIFLQKMDLLLTKTPPDE
:: .. ... . ::: . :.: . .:.. . . . .::.:. ..
XP_016 VLTPLFKVGKFLSAEEYQQKIIPVVVKMFSSTD-----RAMRIRLLQQMEQFIQYLDEPT
190 200 210 220 230 240
310 320 330 340 350 360
pF1KSD IKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAV
......: : ... . :.: .. . .: .. ... :. .. . . .
XP_016 VNTQIFPHVVHGFLDTNPAIREQTVKSMLLLAPKLNEANLNVELMKHFARLQAKDEQGPI
250 260 270 280 290 300
370 380 390 400 410 420
pF1KSD RVNSLVCLGKILEYLD---KWFVLDDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGI
: :. :::::: ::. . :: . . . : :. . :.::. ::. ..
XP_016 RCNTTVCLGKIGSYLSASTRHRVLTSAFSRATRDPFA-PSRVAGVLGFAA---THNLYSM
310 320 330 340 350
430 440 450 460 470 480
pF1KSD TKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLNRLES--EHKTKLEQLHIMQEQ
. . : :.:: : :... . .. .. ...:. .:..::: : :.::..
XP_016 N--DCAQKILPVLCGLTVDPEKSVR--DQAFKAIRSFLSKLESVSEDPTQLEEVEKDVHA
360 370 380 390 400 410
490 500 510 520 530 540
pF1KSD QKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGSESENKEDGLQNKHKRASLT
XP_016 ASSPGMGGAAASWAGWAVTGVSSLTSKLIRSHPTTAPTETNIPQRPTPEGVPAPAPTPVP
420 430 440 450 460 470
794 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:59:00 2016 done: Thu Nov 3 05:59:02 2016
Total Scan time: 13.340 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]