Result of FASTA (omim) for
pF1KSDA1442
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1442, 540 aa
1>>>pF1KSDA1442 540 - 540 aa - 540 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.9117+/-0.0004; mu= 3.9618+/- 0.025
mean_var=263.9997+/-55.982, 0's: 0 Z-trim(121.0): 54 B-trim: 3878 in 2/51
Lambda= 0.078936
statistics sampled from 36864 (36919) to 36864 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.433), width: 16
Scan time: 11.600
The best scores are: opt bits E(85289)
NP_001103984 (OMIM: 609935) transcription factor C ( 598) 3466 408.1 3.9e-113
XP_006723663 (OMIM: 609935) PREDICTED: transcripti ( 571) 3283 387.2 7e-107
XP_016883472 (OMIM: 609935) PREDICTED: transcripti ( 619) 3196 377.4 7.1e-104
XP_016883473 (OMIM: 609935) PREDICTED: transcripti ( 646) 3196 377.4 7.4e-104
NP_001005463 (OMIM: 607407) transcription factor C ( 551) 2799 332.1 2.7e-90
XP_005252726 (OMIM: 607407) PREDICTED: transcripti ( 587) 2784 330.4 9.1e-90
XP_005252724 (OMIM: 607407) PREDICTED: transcripti ( 620) 2784 330.5 9.5e-90
NP_001311036 (OMIM: 164343) transcription factor C ( 584) 2767 328.5 3.5e-89
XP_016864683 (OMIM: 164343) PREDICTED: transcripti ( 596) 2767 328.5 3.5e-89
NP_001311037 (OMIM: 164343) transcription factor C ( 583) 2750 326.6 1.3e-88
XP_016864684 (OMIM: 164343) PREDICTED: transcripti ( 595) 2750 326.6 1.4e-88
NP_001311035 (OMIM: 164343) transcription factor C ( 595) 2750 326.6 1.4e-88
NP_001277289 (OMIM: 164343) transcription factor C ( 592) 2741 325.5 2.7e-88
NP_001311030 (OMIM: 164343) transcription factor C ( 604) 2741 325.6 2.8e-88
XP_016864681 (OMIM: 164343) PREDICTED: transcripti ( 604) 2741 325.6 2.8e-88
NP_076870 (OMIM: 164343) transcription factor COE1 ( 591) 2738 325.2 3.5e-88
NP_001311032 (OMIM: 164343) transcription factor C ( 603) 2738 325.2 3.5e-88
XP_016864682 (OMIM: 164343) PREDICTED: transcripti ( 603) 2738 325.2 3.5e-88
XP_006717806 (OMIM: 607407) PREDICTED: transcripti ( 560) 2676 318.1 4.5e-86
XP_006717805 (OMIM: 607407) PREDICTED: transcripti ( 593) 2676 318.1 4.6e-86
XP_006717804 (OMIM: 607407) PREDICTED: transcripti ( 596) 2674 317.9 5.5e-86
XP_005252725 (OMIM: 607407) PREDICTED: transcripti ( 596) 2674 317.9 5.5e-86
XP_006717802 (OMIM: 607407) PREDICTED: transcripti ( 629) 2674 317.9 5.7e-86
XP_006717803 (OMIM: 607407) PREDICTED: transcripti ( 628) 2670 317.5 7.8e-86
NP_073150 (OMIM: 609934) transcription factor COE2 ( 575) 2640 314.0 7.8e-85
XP_006717807 (OMIM: 607407) PREDICTED: transcripti ( 530) 2578 306.9 9.8e-83
XP_016871516 (OMIM: 607407) PREDICTED: transcripti ( 497) 2576 306.7 1.1e-82
XP_016864685 (OMIM: 164343) PREDICTED: transcripti ( 566) 2576 306.7 1.2e-82
XP_016864687 (OMIM: 164343) PREDICTED: transcripti ( 553) 2573 306.4 1.5e-82
XP_016864686 (OMIM: 164343) PREDICTED: transcripti ( 565) 2573 306.4 1.5e-82
NP_001311038 (OMIM: 164343) transcription factor C ( 544) 2562 305.1 3.5e-82
NP_001311040 (OMIM: 164343) transcription factor C ( 459) 2052 247.0 9.5e-65
XP_016864691 (OMIM: 164343) PREDICTED: transcripti ( 361) 2044 246.0 1.5e-64
XP_016864692 (OMIM: 164343) PREDICTED: transcripti ( 360) 2041 245.6 1.9e-64
XP_016883474 (OMIM: 609935) PREDICTED: transcripti ( 369) 1789 216.9 8.5e-56
XP_011537877 (OMIM: 607407) PREDICTED: transcripti ( 457) 1712 208.2 4.3e-53
NP_874367 (OMIM: 164343) transcription factor COE1 ( 560) 1707 207.8 7.4e-53
XP_016864688 (OMIM: 164343) PREDICTED: transcripti ( 397) 1522 186.6 1.3e-46
XP_016864689 (OMIM: 164343) PREDICTED: transcripti ( 397) 1522 186.6 1.3e-46
XP_016864690 (OMIM: 164343) PREDICTED: transcripti ( 384) 1519 186.2 1.6e-46
XP_011537876 (OMIM: 607407) PREDICTED: transcripti ( 534) 1510 185.3 4e-46
XP_016864693 (OMIM: 164343) PREDICTED: transcripti ( 348) 985 125.3 3e-28
>>NP_001103984 (OMIM: 609935) transcription factor COE4 (598 aa)
initn: 3490 init1: 3461 opt: 3466 Z-score: 2152.2 bits: 408.1 E(85289): 3.9e-113
Smith-Waterman score: 3466; 95.2% identity (96.1% similar) in 540 aa overlap (1-539:1-540)
10 20 30 40 50 60
pF1KSD MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD KSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVII
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD DRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD ARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD SAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLG
430 440 450 460 470 480
490 500 510 520 530
pF1KSD GYGAPGVAGLGVPGSPSFLNGSTATSPFA-KERLRPRAAPPKLPTPGLPQSPRRGASRPV
::::::::::::::::::::::::::::: : :: .. :. . . ::
NP_001 GYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPV
490 500 510 520 530 540
540
pF1KSD F
NP_001 NMISAVKQRSAFAPVLRPPSSPPQACPRAHGEGLPDQSFEDSDKFHSPARGLQGLAYS
550 560 570 580 590
>>XP_006723663 (OMIM: 609935) PREDICTED: transcription f (571 aa)
initn: 3307 init1: 3278 opt: 3283 Z-score: 2039.8 bits: 387.2 E(85289): 7e-107
Smith-Waterman score: 3283; 94.9% identity (95.9% similar) in 513 aa overlap (28-539:1-513)
10 20 30 40 50 60
pF1KSD MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLR
:::::::::::::::::::::::::::::::::
XP_006 MQGAGILDASTAAQSGVGLARAHFEKQPPSNLR
10 20 30
70 80 90 100 110 120
pF1KSD KSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTE
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD QDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVII
100 110 120 130 140 150
190 200 210 220 230 240
pF1KSD DRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KSD ARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAI
220 230 240 250 260 270
310 320 330 340 350 360
pF1KSD RVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDP
280 290 300 310 320 330
370 380 390 400 410 420
pF1KSD ERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPH
340 350 360 370 380 390
430 440 450 460 470 480
pF1KSD SAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLG
400 410 420 430 440 450
490 500 510 520 530
pF1KSD GYGAPGVAGLGVPGSPSFLNGSTATSPFA-KERLRPRAAPPKLPTPGLPQSPRRGASRPV
::::::::::::::::::::::::::::: : :: .. :. . . ::
XP_006 GYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPV
460 470 480 490 500 510
540
pF1KSD F
XP_006 NMISAVKQRSAFAPVLRPPSSPPQACPRAHGEGLPDQSFEDSDKFHSPARGLQGLAYS
520 530 540 550 560 570
>>XP_016883472 (OMIM: 609935) PREDICTED: transcription f (619 aa)
initn: 3218 init1: 3189 opt: 3196 Z-score: 1985.8 bits: 377.4 E(85289): 7.1e-104
Smith-Waterman score: 3196; 91.4% identity (93.1% similar) in 524 aa overlap (21-539:38-561)
10 20 30 40
pF1KSD MDALPRSGLNLKEEPLLPAGLGSVRSWMQ--G--AGILDASTAAQSGVGL
.:: .: . : :: : . ::::
XP_016 DASTAAQRVGGWGCAEPEKRLGAGRWRRDEVGSRPGWTDWPGNWAGPLPFPRVFFCGVGL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KSD ARAHFEKQPPSNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARAHFEKQPPSNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIH
70 80 90 100 110 120
110 120 130 140 150 160
pF1KSD YRLRLVYNNGLRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YRLRLVYNNGLRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KSD CGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KSD DNMFVHNNSKHGRRARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DNMFVHNNSKHGRRARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFG
250 260 270 280 290 300
290 300 310 320 330 340
pF1KSD NVLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGF
310 320 330 340 350 360
350 360 370 380 390 400
pF1KSD QRLQKVIPRHPGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRLQKVIPRHPGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPR
370 380 390 400 410 420
410 420 430 440 450 460
pF1KSD APGPLAPLAPSHPHSAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGS
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
XP_016 APGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGS
430 440 450 460 470 480
470 480 490 500 510 520
pF1KSD QQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFA-KERLRPRAAPPKLPTP
::::::::::::::::::::::::::::::::::::::::::: : :: .. :
XP_016 QQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLP
490 500 510 520 530 540
530 540
pF1KSD GLPQSPRRGASRPVF
. . . ::
XP_016 AAAPTTSVFSFSPVNMISAVKQRSAFAPVLRPPSSPPQACPRAHGEGLPDQSFEDSDKFH
550 560 570 580 590 600
>>XP_016883473 (OMIM: 609935) PREDICTED: transcription f (646 aa)
initn: 3218 init1: 3189 opt: 3196 Z-score: 1985.6 bits: 377.4 E(85289): 7.4e-104
Smith-Waterman score: 3249; 86.9% identity (87.8% similar) in 572 aa overlap (17-539:17-588)
10 20 30 40
pF1KSD MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQS------------------
:::::::::::::::::::::::::
XP_016 MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQRVGGWGCAEPEKRLGAGRW
10 20 30 40 50 60
50 60 70
pF1KSD ------------------------------GVGLARAHFEKQPPSNLRKSNFFHFVLAMY
::::::::::::::::::::::::::::::
XP_016 RRDEVGSRPGWTDWPGNWAGPLPFPRVFFCGVGLARAHFEKQPPSNLRKSNFFHFVLAMY
70 80 90 100 110 120
80 90 100 110 120 130
pF1KSD DRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTEQDLYVRLIDSMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTEQDLYVRLIDSMS
130 140 150 160 170 180
140 150 160 170 180 190
pF1KSD KQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVIIDRFFLKFFLKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVIIDRFFLKFFLKCN
190 200 210 220 230 240
200 210 220 230 240 250
pF1KSD QNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEAATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEAATP
250 260 270 280 290 300
260 270 280 290 300 310
pF1KSD CIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAIRVQTPPRHIPGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAIRVQTPPRHIPGV
310 320 330 340 350 360
320 330 340 350 360 370
pF1KSD VEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRA
370 380 390 400 410 420
380 390 400 410 420 430
pF1KSD ADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHSAVVGINAFSSP
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
XP_016 ADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAVVGINAFSSP
430 440 450 460 470 480
440 450 460 470 480 490
pF1KSD LAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGV
490 500 510 520 530 540
500 510 520 530 540
pF1KSD PGSPSFLNGSTATSPFA-KERLRPRAAPPKLPTPGLPQSPRRGASRPVF
::::::::::::::::: : :: .. :. . . ::
XP_016 PGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAF
550 560 570 580 590 600
XP_016 APVLRPPSSPPQACPRAHGEGLPDQSFEDSDKFHSPARGLQGLAYS
610 620 630 640
>>NP_001005463 (OMIM: 607407) transcription factor COE3 (551 aa)
initn: 2746 init1: 1464 opt: 2799 Z-score: 1742.1 bits: 332.1 E(85289): 2.7e-90
Smith-Waterman score: 2799; 77.2% identity (92.8% similar) in 527 aa overlap (2-520:6-529)
10 20 30 40 50
pF1KSD MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPP
. .::.: ..::::: .:.. :::::. ::..::.:::::::::::::::::::
NP_001 MFGIQENIPRGGTTMKEEPL-GSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPP
10 20 30 40 50
60 70 80 90 100 110
pF1KSD SNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNG
::::::::::::::.:::::::::.:::::.:::::..::. :::::::::.:.:.:.::
NP_001 SNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD LRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSD
.::::::::::::::.::::.::::::::::::::::::::::::::.::::::::::::
NP_001 VRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSD
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSK
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
NP_001 PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD HGRRARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELIT
::::::::::::: :::::::::.:::::::::::.::::::::::::::..::::::::
NP_001 HGRRARRLDPSEA-TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELIT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRH
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
NP_001 PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRH
300 310 320 330 340 350
360 370 380 390 400 410
pF1KSD PGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAP
:::::::::::::::::::.:::::.: .:::..::::::.::::::.:: . . :.
NP_001 PGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGN
360 370 380 390 400 410
420 430 440 450 460 470
pF1KSD SHPHSAVVGINAFSSPLAIAVGDATPGPEP-GYARSCSSASPRGFAPSPGSQQSGYGGGL
. :....:.:.::: ::. :.... . . ::.:. ::.::::..:: :::.:. .
NP_001 NPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNT-V
420 430 440 450 460 470
480 490 500 510 520
pF1KSD GAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFA-KER------LRPRAAPPKLPTPGLP
.....:::. ..:.:::::::.:::::.:.::.. :.. .::.:.::
NP_001 STSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASPPPSCTSANG
480 490 500 510 520 530
530 540
pF1KSD QSPRRGASRPVF
NP_001 NGLQAMSGLVVPPM
540 550
>>XP_005252726 (OMIM: 607407) PREDICTED: transcription f (587 aa)
initn: 2805 init1: 1464 opt: 2784 Z-score: 1732.6 bits: 330.4 E(85289): 9.1e-90
Smith-Waterman score: 2784; 77.0% identity (92.0% similar) in 525 aa overlap (2-525:6-527)
10 20 30 40 50
pF1KSD MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPP
. .::.: ..::::: .:.. :::::. ::..::.:::::::::::::::::::
XP_005 MFGIQENIPRGGTTMKEEPL-GSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPP
10 20 30 40 50
60 70 80 90 100 110
pF1KSD SNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNG
::::::::::::::.:::::::::.:::::.:::::..::. :::::::::.:.:.:.::
XP_005 SNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD LRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSD
.::::::::::::::.::::.::::::::::::::::::::::::::.::::::::::::
XP_005 VRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSD
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSK
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
XP_005 PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD HGRRARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELIT
::::::::::::: :::::::::.:::::::::::.::::::::::::::..::::::::
XP_005 HGRRARRLDPSEA-TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELIT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRH
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_005 PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRH
300 310 320 330 340 350
360 370 380 390 400 410
pF1KSD PGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAP
:::::::::::::::::::.:::::.: .:::..::::::.::::::.:: . . :.
XP_005 PGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGN
360 370 380 390 400 410
420 430 440 450 460 470
pF1KSD SHPHSAVVGINAFSSPLAIAVGDATPGPEP-GYARSCSSASPRGFAPSPGSQQSGYGGGL
. :....:.:.::: ::. :.... . . ::.:. ::.::::..:: :::.:. .
XP_005 NPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNT-V
420 430 440 450 460 470
480 490 500 510 520 530
pF1KSD GAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAKERLRPRAAPPKLPTPGLPQSPRRGA
.....:::. ..:.:::::::.:::::.:.::.. : : .. :
XP_005 STSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGIVPSSPTMAASSVTLPSNCSSTHGIF
480 490 500 510 520 530
540
pF1KSD SRPVF
XP_005 SFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM
540 550 560 570 580
>>XP_005252724 (OMIM: 607407) PREDICTED: transcription f (620 aa)
initn: 2805 init1: 1464 opt: 2784 Z-score: 1732.3 bits: 330.5 E(85289): 9.5e-90
Smith-Waterman score: 2784; 77.0% identity (92.0% similar) in 525 aa overlap (2-525:6-527)
10 20 30 40 50
pF1KSD MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPP
. .::.: ..::::: .:.. :::::. ::..::.:::::::::::::::::::
XP_005 MFGIQENIPRGGTTMKEEPL-GSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPP
10 20 30 40 50
60 70 80 90 100 110
pF1KSD SNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNG
::::::::::::::.:::::::::.:::::.:::::..::. :::::::::.:.:.:.::
XP_005 SNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD LRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSD
.::::::::::::::.::::.::::::::::::::::::::::::::.::::::::::::
XP_005 VRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSD
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSK
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
XP_005 PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD HGRRARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELIT
::::::::::::: :::::::::.:::::::::::.::::::::::::::..::::::::
XP_005 HGRRARRLDPSEA-TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELIT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRH
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_005 PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRH
300 310 320 330 340 350
360 370 380 390 400 410
pF1KSD PGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAP
:::::::::::::::::::.:::::.: .:::..::::::.::::::.:: . . :.
XP_005 PGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGN
360 370 380 390 400 410
420 430 440 450 460 470
pF1KSD SHPHSAVVGINAFSSPLAIAVGDATPGPEP-GYARSCSSASPRGFAPSPGSQQSGYGGGL
. :....:.:.::: ::. :.... . . ::.:. ::.::::..:: :::.:. .
XP_005 NPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNT-V
420 430 440 450 460 470
480 490 500 510 520 530
pF1KSD GAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAKERLRPRAAPPKLPTPGLPQSPRRGA
.....:::. ..:.:::::::.:::::.:.::.. : : .. :
XP_005 STSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGIVPSSPTMAASSVTLPSNCSSTHGIF
480 490 500 510 520 530
540
pF1KSD SRPVF
XP_005 SFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQGSLLGAEDVAAEKTNWPFCE
540 550 560 570 580 590
>>NP_001311036 (OMIM: 164343) transcription factor COE1 (584 aa)
initn: 2865 init1: 2603 opt: 2767 Z-score: 1722.1 bits: 328.5 E(85289): 3.5e-89
Smith-Waterman score: 2767; 76.3% identity (92.6% similar) in 524 aa overlap (2-524:6-525)
10 20 30 40 50
pF1KSD MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPP
... ::: ..::::: .:...::.::::::.:::.:::::::::::::::::::
NP_001 MFGIQESIQRSGSSMKEEPL-GSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPP
10 20 30 40 50
60 70 80 90 100 110
pF1KSD SNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNG
::::::::::::::.:::::::::.:::::. ::::..: ..:::::::::::.:.:.::
NP_001 SNLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD LRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSD
.:::::.::::::::.::::.::::::::::::::::::::::::::.::::::::::::
NP_001 IRTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSD
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSK
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
NP_001 PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD HGRRARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELIT
:::::::::::::::::::::::.:::::::::::.:::::::::::.::..::::::::
NP_001 HGRRARRLDPSEAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWSELIT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRH
::::::::::::::::::::::::::::::: ::::.:::::::::::::::::::::::
NP_001 PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQKVIPRH
300 310 320 330 340 350
360 370 380 390 400 410
pF1KSD PGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAP
:::::::::::.:::::::.:::::.: .:::..::::::.::::::.:: . : ::
NP_001 PGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQLPALAN
360 370 380 390 400 410
420 430 440 450 460 470
pF1KSD SHPHSAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLG
. :....:.:.::. ::. :..:. . . :..:. ::.::.:..:: ::..:.. .
NP_001 TSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQTNYNS-VT
420 430 440 450 460 470
480 490 500 510 520 530
pF1KSD AGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAKERLRPR-AAPPKLPTPGLPQSPRRGA
....:::. ....:: :::.:::::.:.::.: : :. .::.
NP_001 TSMNGYGSAAMSNLG--GSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSF
480 490 500 510 520 530
540
pF1KSD SRPVF
NP_001 SPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM
540 550 560 570 580
>>XP_016864683 (OMIM: 164343) PREDICTED: transcription f (596 aa)
initn: 2865 init1: 2603 opt: 2767 Z-score: 1722.0 bits: 328.5 E(85289): 3.5e-89
Smith-Waterman score: 2767; 76.3% identity (92.6% similar) in 524 aa overlap (2-524:6-525)
10 20 30 40 50
pF1KSD MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPP
... ::: ..::::: .:...::.::::::.:::.:::::::::::::::::::
XP_016 MFGIQESIQRSGSSMKEEPL-GSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPP
10 20 30 40 50
60 70 80 90 100 110
pF1KSD SNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNG
::::::::::::::.:::::::::.:::::. ::::..: ..:::::::::::.:.:.::
XP_016 SNLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD LRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSD
.:::::.::::::::.::::.::::::::::::::::::::::::::.::::::::::::
XP_016 IRTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSD
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSK
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
XP_016 PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD HGRRARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELIT
:::::::::::::::::::::::.:::::::::::.:::::::::::.::..::::::::
XP_016 HGRRARRLDPSEAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWSELIT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRH
::::::::::::::::::::::::::::::: ::::.:::::::::::::::::::::::
XP_016 PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQKVIPRH
300 310 320 330 340 350
360 370 380 390 400 410
pF1KSD PGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAP
:::::::::::.:::::::.:::::.: .:::..::::::.::::::.:: . : ::
XP_016 PGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQLPALAN
360 370 380 390 400 410
420 430 440 450 460 470
pF1KSD SHPHSAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLG
. :....:.:.::. ::. :..:. . . :..:. ::.::.:..:: ::..:.. .
XP_016 TSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQTNYNS-VT
420 430 440 450 460 470
480 490 500 510 520 530
pF1KSD AGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAKERLRPR-AAPPKLPTPGLPQSPRRGA
....:::. ....:: :::.:::::.:.::.: : :. .::.
XP_016 TSMNGYGSAAMSNLG--GSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSF
480 490 500 510 520 530
540
pF1KSD SRPVF
XP_016 SPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQDQSFVDSSKFSSAGSLPGLAFS
540 550 560 570 580 590
>>NP_001311037 (OMIM: 164343) transcription factor COE1 (583 aa)
initn: 2795 init1: 1466 opt: 2750 Z-score: 1711.7 bits: 326.6 E(85289): 1.3e-88
Smith-Waterman score: 2750; 76.1% identity (92.4% similar) in 524 aa overlap (2-524:6-524)
10 20 30 40 50
pF1KSD MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPP
... ::: ..::::: .:...::.::::::.:::.:::::::::::::::::::
NP_001 MFGIQESIQRSGSSMKEEPL-GSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPP
10 20 30 40 50
60 70 80 90 100 110
pF1KSD SNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNG
::::::::::::::.:::::::::.:::::. ::::..: ..:::::::::::.:.:.::
NP_001 SNLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD LRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSD
.:::::.::::::::.::::.::::::::::::::::::::::::::.::::::::::::
NP_001 IRTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSD
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSK
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
NP_001 PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD HGRRARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELIT
::::::::::::: :::::::::.:::::::::::.:::::::::::.::..::::::::
NP_001 HGRRARRLDPSEA-TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWSELIT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRH
::::::::::::::::::::::::::::::: ::::.:::::::::::::::::::::::
NP_001 PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQKVIPRH
300 310 320 330 340 350
360 370 380 390 400 410
pF1KSD PGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAP
:::::::::::.:::::::.:::::.: .:::..::::::.::::::.:: . : ::
NP_001 PGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQLPALAN
360 370 380 390 400 410
420 430 440 450 460 470
pF1KSD SHPHSAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLG
. :....:.:.::. ::. :..:. . . :..:. ::.::.:..:: ::..:.. .
NP_001 TSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQTNYNS-VT
420 430 440 450 460 470
480 490 500 510 520 530
pF1KSD AGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAKERLRPR-AAPPKLPTPGLPQSPRRGA
....:::. ....:: :::.:::::.:.::.: : :. .::.
NP_001 TSMNGYGSAAMSNLG--GSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSF
480 490 500 510 520 530
540
pF1KSD SRPVF
NP_001 SPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM
540 550 560 570 580
540 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 06:20:00 2016 done: Thu Nov 3 06:20:02 2016
Total Scan time: 11.600 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]