Result of FASTA (omim) for
pF1KSDA1599
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1599, 593 aa
1>>>pF1KSDA1599 593 - 593 aa - 593 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4647+/-0.000357; mu= 9.8724+/- 0.023
mean_var=129.5110+/-25.768, 0's: 0 Z-trim(117.9): 130 B-trim: 0 in 0/55
Lambda= 0.112699
statistics sampled from 30211 (30350) to 30211 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.69), E-opt: 0.2 (0.356), width: 16
Scan time: 11.210
The best scores are: opt bits E(85289)
NP_065990 (OMIM: 604209) copine-5 isoform a [Homo ( 593) 3970 656.9 5.5e-188
XP_011513071 (OMIM: 604209) PREDICTED: copine-5 is ( 653) 3497 580.0 8.4e-165
XP_005249304 (OMIM: 604209) PREDICTED: copine-5 is ( 610) 2939 489.3 1.6e-137
XP_016866628 (OMIM: 604209) PREDICTED: copine-5 is ( 522) 2466 412.3 2e-114
XP_011513072 (OMIM: 604209) PREDICTED: copine-5 is ( 632) 2466 412.4 2.4e-114
XP_011513073 (OMIM: 604209) PREDICTED: copine-5 is ( 632) 2466 412.4 2.4e-114
XP_011513070 (OMIM: 604209) PREDICTED: copine-5 is ( 670) 2466 412.4 2.5e-114
XP_011513075 (OMIM: 604209) PREDICTED: copine-5 is ( 473) 2290 383.7 7.6e-106
XP_011513074 (OMIM: 604209) PREDICTED: copine-5 is ( 543) 2172 364.5 5.1e-100
NP_001300947 (OMIM: 604209) copine-5 isoform c [Ho ( 301) 1982 333.5 6.2e-91
NP_001300948 (OMIM: 604209) copine-5 isoform d [Ho ( 243) 1614 273.6 5.3e-73
NP_001300949 (OMIM: 604209) copine-5 isoform d [Ho ( 243) 1614 273.6 5.3e-73
XP_011513077 (OMIM: 604209) PREDICTED: copine-5 is ( 361) 1509 256.6 1e-67
XP_011510708 (OMIM: 604208) PREDICTED: copine-4 is ( 444) 1472 250.7 7.9e-66
XP_011510710 (OMIM: 604208) PREDICTED: copine-4 is ( 444) 1472 250.7 7.9e-66
XP_011510709 (OMIM: 604208) PREDICTED: copine-4 is ( 444) 1472 250.7 7.9e-66
NP_570720 (OMIM: 604208) copine-4 isoform 2 [Homo ( 557) 1472 250.7 9.5e-66
XP_016861182 (OMIM: 604208) PREDICTED: copine-4 is ( 575) 1472 250.7 9.8e-66
NP_702907 (OMIM: 604208) copine-4 isoform 1 [Homo ( 575) 1472 250.7 9.8e-66
NP_001276041 (OMIM: 604208) copine-4 isoform 1 [Ho ( 575) 1472 250.7 9.8e-66
XP_005251150 (OMIM: 604207) PREDICTED: copine-3 is ( 537) 1453 247.6 7.8e-65
XP_016869434 (OMIM: 604207) PREDICTED: copine-3 is ( 537) 1453 247.6 7.8e-65
NP_003900 (OMIM: 604207) copine-3 [Homo sapiens] ( 537) 1453 247.6 7.8e-65
NP_689940 (OMIM: 604206) copine-2 [Homo sapiens] ( 548) 1444 246.2 2.2e-64
NP_690903 (OMIM: 604205) copine-1 isoform a [Homo ( 537) 1432 244.2 8.4e-64
NP_690904 (OMIM: 604205) copine-1 isoform a [Homo ( 537) 1432 244.2 8.4e-64
NP_690902 (OMIM: 604205) copine-1 isoform a [Homo ( 537) 1432 244.2 8.4e-64
NP_690905 (OMIM: 604205) copine-1 isoform a [Homo ( 537) 1432 244.2 8.4e-64
NP_003906 (OMIM: 604205) copine-1 isoform b [Homo ( 542) 1432 244.2 8.4e-64
NP_001185792 (OMIM: 604205) copine-1 isoform c [Ho ( 536) 1424 242.9 2.1e-63
XP_005268273 (OMIM: 605688) PREDICTED: copine-6 is ( 557) 1406 240.0 1.6e-62
NP_006023 (OMIM: 605688) copine-6 isoform 2 [Homo ( 557) 1406 240.0 1.6e-62
NP_001267487 (OMIM: 605688) copine-6 isoform 1 [Ho ( 612) 1406 240.0 1.7e-62
NP_705900 (OMIM: 605689) copine-7 isoform a [Homo ( 558) 1375 234.9 5.3e-61
NP_055242 (OMIM: 605689) copine-7 isoform b [Homo ( 633) 1366 233.5 1.6e-60
XP_016878628 (OMIM: 605689) PREDICTED: copine-7 is ( 637) 1366 233.5 1.6e-60
XP_011521302 (OMIM: 605689) PREDICTED: copine-7 is ( 595) 1309 224.2 9.6e-58
XP_016878629 (OMIM: 605689) PREDICTED: copine-7 is ( 599) 1309 224.2 9.6e-58
XP_011521303 (OMIM: 605689) PREDICTED: copine-7 is ( 527) 1300 222.7 2.4e-57
XP_016878627 (OMIM: 605689) PREDICTED: copine-7 is ( 670) 1300 222.8 2.9e-57
XP_005268274 (OMIM: 605688) PREDICTED: copine-6 is ( 382) 1252 214.9 4.1e-55
XP_016861184 (OMIM: 604208) PREDICTED: copine-4 is ( 417) 1163 200.4 9.9e-51
XP_016861183 (OMIM: 604208) PREDICTED: copine-4 is ( 434) 1084 187.6 7.5e-47
XP_016861185 (OMIM: 604208) PREDICTED: copine-4 is ( 306) 1052 182.3 2.1e-45
XP_016878630 (OMIM: 605689) PREDICTED: copine-7 is ( 344) 953 166.2 1.6e-40
NP_001300946 (OMIM: 604209) copine-5 isoform b [Ho ( 140) 910 159.0 9.6e-39
>>NP_065990 (OMIM: 604209) copine-5 isoform a [Homo sapi (593 aa)
initn: 3970 init1: 3970 opt: 3970 Z-score: 3496.0 bits: 656.9 E(85289): 5.5e-188
Smith-Waterman score: 3970; 100.0% identity (100.0% similar) in 593 aa overlap (1-593:1-593)
10 20 30 40 50 60
pF1KSD MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNGGVPGKKCGTIILSAEELSNCRDVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNGGVPGKKCGTIILSAEELSNCRDVAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD MQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQTFSIPVRALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQTFSIPVRALC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD NGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKKKMKKKKYVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKKKMKKKKYVN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYMSPYQLNAYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYMSPYQLNAYA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD RSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNAAK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVPFRDYVDRTGNHVLSMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVPFRDYVDRTGNHVLSMA
490 500 510 520 530 540
550 560 570 580 590
pF1KSD RLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPSQSPARTPPASPLHTHI
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPSQSPARTPPASPLHTHI
550 560 570 580 590
>>XP_011513071 (OMIM: 604209) PREDICTED: copine-5 isofor (653 aa)
initn: 3572 init1: 3478 opt: 3497 Z-score: 3079.7 bits: 580.0 E(85289): 8.4e-165
Smith-Waterman score: 3497; 90.8% identity (93.3% similar) in 597 aa overlap (1-591:1-593)
10 20 30 40 50 60
pF1KSD MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNGGVPGKKCGTIILSAEELSNCRDVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNGGVPGKKCGTIILSAEELSNCRDVAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD MQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQTFSIPVRALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQTFSIPVRALC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD NGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKKKMKKKKYVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKKKMKKKKYVN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYMSPYQLNAYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYMSPYQLNAYA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD LALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD RSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNAAK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD LPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVPFRDYVDRTGNHVLSMA
::::::::::::::::::::::::::::::::::::::::: : : . . .. : .
XP_011 LPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQVKP-RPCLPH--GKFKSPS
490 500 510 520 530
550 560 570 580 590
pF1KSD RLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPSQSPART-----PPASPL-HTHI
: :. . .::. ... .:. ::. : ::: : :: : : ::
XP_011 SQA-DLTPPLGASLVKGPEGRHWEPQSGPATTEGSRSQSSAMLWSGLGPPLSHLGHTPNI
540 550 560 570 580 590
XP_011 AGAQPEARTLCQPFLSLQASVVSLVLVFFCPLKAEAVSLVLLQPSPRIGIARLTESM
600 610 620 630 640 650
>>XP_005249304 (OMIM: 604209) PREDICTED: copine-5 isofor (610 aa)
initn: 2939 init1: 2939 opt: 2939 Z-score: 2589.8 bits: 489.3 E(85289): 1.6e-137
Smith-Waterman score: 3926; 97.2% identity (97.2% similar) in 610 aa overlap (1-593:1-610)
10 20 30 40 50 60
pF1KSD MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
70 80 90 100 110 120
130 140 150 160
pF1KSD EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNG-----------------GVPGKKCG
::::::::::::::::::::::::::::::::::: ::::::::
XP_005 EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNGSGLWMESLRTTGLEASGGVPGKKCG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KSD TIILSAEELSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TIILSAEELSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKN
190 200 210 220 230 240
230 240 250 260 270 280
pF1KSD TLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNI
250 260 270 280 290 300
290 300 310 320 330 340
pF1KSD YEVVNPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEVVNPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPS
310 320 330 340 350 360
350 360 370 380 390 400
pF1KSD QSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGN
370 380 390 400 410 420
410 420 430 440 450 460
pF1KSD QENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDG
430 440 450 460 470 480
470 480 490 500 510 520
pF1KSD VISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFV
490 500 510 520 530 540
530 540 550 560 570 580
pF1KSD PFRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPSQSPART
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PFRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPSQSPART
550 560 570 580 590 600
590
pF1KSD PPASPLHTHI
::::::::::
XP_005 PPASPLHTHI
610
>>XP_016866628 (OMIM: 604209) PREDICTED: copine-5 isofor (522 aa)
initn: 2539 init1: 2445 opt: 2466 Z-score: 2175.2 bits: 412.3 E(85289): 2e-114
Smith-Waterman score: 2466; 87.2% identity (91.0% similar) in 445 aa overlap (153-591:22-462)
130 140 150 160 170 180
pF1KSD VGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNGGVPGKKCGTIILSAEELSNCRDVATMQ
..::::::::::::::::::::::::::::
XP_016 MPAVSNGSGLWMESLRTTGLEASGGVPGKKCGTIILSAEELSNCRDVATMQ
10 20 30 40 50
190 200 210 220 230 240
pF1KSD FCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQTFSIPVRALCNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQTFSIPVRALCNG
60 70 80 90 100 110
250 260 270 280 290 300
pF1KSD DYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKKKMKKKKYVNSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKKKMKKKKYVNSG
120 130 140 150 160 170
310 320 330 340 350 360
pF1KSD TVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYMSPYQLNAYALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYMSPYQLNAYALA
180 190 200 210 220 230
370 380 390 400 410 420
pF1KSD LTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYHRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYHRS
240 250 260 270 280 290
430 440 450 460 470 480
pF1KSD LRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNAAKLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNAAKLP
300 310 320 330 340 350
490 500 510 520 530 540
pF1KSD MSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVPFRDYVDRTGNHVLSMARL
::::::::::::::::::::::::::::::::::::::: : : . . .. : .
XP_016 MSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQVKP-RPCLPH--GKFKSPSSQ
360 370 380 390 400
550 560 570 580 590
pF1KSD ARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPSQSPART-----PPASPL-HTHI
: :. . .::. ... .:. ::. : ::: : :: : : ::
XP_016 A-DLTPPLGASLVKGPEGRHWEPQSGPATTEGSRSQSSAMLWSGLGPPLSHLGHTPNIAG
410 420 430 440 450 460
XP_016 AQPEARTLCQPFLSLQASVVSLVLVFFCPLKAEAVSLVLLQPSPRIGIARLTESM
470 480 490 500 510 520
>>XP_011513072 (OMIM: 604209) PREDICTED: copine-5 isofor (632 aa)
initn: 3259 init1: 2445 opt: 2466 Z-score: 2174.0 bits: 412.4 E(85289): 2.4e-114
Smith-Waterman score: 3211; 87.5% identity (90.1% similar) in 576 aa overlap (39-591:1-572)
10 20 30 40 50 60
pF1KSD SLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWREFGRTEVI
::::::::::::::::::::::::::::::
XP_011 MFSKSDPLCVMYTQGMENKQWREFGRTEVI
10 20 30
70 80 90 100 110 120
pF1KSD DNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLGEIVGSPGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLGEIVGSPGS
40 50 60 70 80 90
130 140 150 160 170
pF1KSD RLEKPLTIGAFSLNSRTGKPMPAVSNG-----------------GVPGKKCGTIILSAEE
::::::::::::::::::::::::::: ::::::::::::::::
XP_011 RLEKPLTIGAFSLNSRTGKPMPAVSNGSGLWMESLRTTGLEASGGVPGKKCGTIILSAEE
100 110 120 130 140 150
180 190 200 210 220 230
pF1KSD LSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQT
160 170 180 190 200 210
240 250 260 270 280 290
pF1KSD FSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKK
220 230 240 250 260 270
300 310 320 330 340 350
pF1KSD KMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYM
280 290 300 310 320 330
360 370 380 390 400 410
pF1KSD SPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCG
340 350 360 370 380 390
420 430 440 450 460 470
pF1KSD IDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQT
400 410 420 430 440 450
480 490 500 510 520 530
pF1KSD KEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVPFRDYVDR
:::::::::::::::::::::::::::::::::::::::::::::::::: : : . .
XP_011 KEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQVKP-RPCLPH
460 470 480 490 500
540 550 560 570 580
pF1KSD TGNHVLSMARLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPSQSPART-----PPA
.. : . : :. . .::. ... .:. ::. : ::: : ::
XP_011 --GKFKSPSSQA-DLTPPLGASLVKGPEGRHWEPQSGPATTEGSRSQSSAMLWSGLGPPL
510 520 530 540 550 560
590
pF1KSD SPL-HTHI
: : ::
XP_011 SHLGHTPNIAGAQPEARTLCQPFLSLQASVVSLVLVFFCPLKAEAVSLVLLQPSPRIGIA
570 580 590 600 610 620
>>XP_011513073 (OMIM: 604209) PREDICTED: copine-5 isofor (632 aa)
initn: 3259 init1: 2445 opt: 2466 Z-score: 2174.0 bits: 412.4 E(85289): 2.4e-114
Smith-Waterman score: 3211; 87.5% identity (90.1% similar) in 576 aa overlap (39-591:1-572)
10 20 30 40 50 60
pF1KSD SLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWREFGRTEVI
::::::::::::::::::::::::::::::
XP_011 MFSKSDPLCVMYTQGMENKQWREFGRTEVI
10 20 30
70 80 90 100 110 120
pF1KSD DNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLGEIVGSPGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLGEIVGSPGS
40 50 60 70 80 90
130 140 150 160 170
pF1KSD RLEKPLTIGAFSLNSRTGKPMPAVSNG-----------------GVPGKKCGTIILSAEE
::::::::::::::::::::::::::: ::::::::::::::::
XP_011 RLEKPLTIGAFSLNSRTGKPMPAVSNGSGLWMESLRTTGLEASGGVPGKKCGTIILSAEE
100 110 120 130 140 150
180 190 200 210 220 230
pF1KSD LSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQT
160 170 180 190 200 210
240 250 260 270 280 290
pF1KSD FSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKK
220 230 240 250 260 270
300 310 320 330 340 350
pF1KSD KMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYM
280 290 300 310 320 330
360 370 380 390 400 410
pF1KSD SPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCG
340 350 360 370 380 390
420 430 440 450 460 470
pF1KSD IDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQT
400 410 420 430 440 450
480 490 500 510 520 530
pF1KSD KEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVPFRDYVDR
:::::::::::::::::::::::::::::::::::::::::::::::::: : : . .
XP_011 KEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQVKP-RPCLPH
460 470 480 490 500
540 550 560 570 580
pF1KSD TGNHVLSMARLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPSQSPART-----PPA
.. : . : :. . .::. ... .:. ::. : ::: : ::
XP_011 --GKFKSPSSQA-DLTPPLGASLVKGPEGRHWEPQSGPATTEGSRSQSSAMLWSGLGPPL
510 520 530 540 550 560
590
pF1KSD SPL-HTHI
: : ::
XP_011 SHLGHTPNIAGAQPEARTLCQPFLSLQASVVSLVLVFFCPLKAEAVSLVLLQPSPRIGIA
570 580 590 600 610 620
>>XP_011513070 (OMIM: 604209) PREDICTED: copine-5 isofor (670 aa)
initn: 3501 init1: 2445 opt: 2466 Z-score: 2173.6 bits: 412.4 E(85289): 2.5e-114
Smith-Waterman score: 3453; 88.3% identity (90.7% similar) in 614 aa overlap (1-591:1-610)
10 20 30 40 50 60
pF1KSD MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
70 80 90 100 110 120
130 140 150 160
pF1KSD EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNG-----------------GVPGKKCG
::::::::::::::::::::::::::::::::::: ::::::::
XP_011 EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNGSGLWMESLRTTGLEASGGVPGKKCG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KSD TIILSAEELSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TIILSAEELSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKN
190 200 210 220 230 240
230 240 250 260 270 280
pF1KSD TLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNI
250 260 270 280 290 300
290 300 310 320 330 340
pF1KSD YEVVNPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YEVVNPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPS
310 320 330 340 350 360
350 360 370 380 390 400
pF1KSD QSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGN
370 380 390 400 410 420
410 420 430 440 450 460
pF1KSD QENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDG
430 440 450 460 470 480
470 480 490 500 510 520
pF1KSD VISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQVK
490 500 510 520 530 540
530 540 550 560 570 580
pF1KSD PFRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPSQSPART
: : . . .. : . : :. . .::. ... .:. ::. : ::: :
XP_011 P-RPCLPH--GKFKSPSSQA-DLTPPLGASLVKGPEGRHWEPQSGPATTEGSRSQSSAML
550 560 570 580 590
590
pF1KSD -----PPASPL-HTHI
:: : : ::
XP_011 WSGLGPPLSHLGHTPNIAGAQPEARTLCQPFLSLQASVVSLVLVFFCPLKAEAVSLVLLQ
600 610 620 630 640 650
>>XP_011513075 (OMIM: 604209) PREDICTED: copine-5 isofor (473 aa)
initn: 2365 init1: 2271 opt: 2290 Z-score: 2021.2 bits: 383.7 E(85289): 7.6e-106
Smith-Waterman score: 2290; 86.8% identity (90.4% similar) in 417 aa overlap (181-591:1-413)
160 170 180 190 200 210
pF1KSD AVSNGGVPGKKCGTIILSAEELSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDG
::::::::::::::::::::::::::::::
XP_011 MQFCANKLDKKDFFGKSDPFLVFYRSNEDG
10 20 30
220 230 240 250 260 270
pF1KSD TFTICHKTEVMKNTLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TFTICHKTEVMKNTLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTS
40 50 60 70 80 90
280 290 300 310 320 330
pF1KSD YRELARGQSQFNIYEVVNPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YRELARGQSQFNIYEVVNPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFT
100 110 120 130 140 150
340 350 360 370 380 390
pF1KSD VAIDFTASNGNPSQSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAIDFTASNGNPSQSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPP
160 170 180 190 200 210
400 410 420 430 440 450
pF1KSD DGRVSHEFPLNGNQENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGRVSHEFPLNGNQENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQD
220 230 240 250 260 270
460 470 480 490 500 510
pF1KSD GSQYSVLLIITDGVISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSQYSVLLIITDGVISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISS
280 290 300 310 320 330
520 530 540 550 560 570
pF1KSD RGKLAERDIVQFVPFRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMKAQGIRPRPPPA
::::::::::: : : . . .. : . : :. . .::. ... .:. ::
XP_011 RGKLAERDIVQVKP-RPCLPH--GKFKSPSSQA-DLTPPLGASLVKGPEGRHWEPQSGPA
340 350 360 370 380
580 590
pF1KSD APTHSPSQSPART-----PPASPL-HTHI
. : ::: : :: : : ::
XP_011 TTEGSRSQSSAMLWSGLGPPLSHLGHTPNIAGAQPEARTLCQPFLSLQASVVSLVLVFFC
390 400 410 420 430 440
>>XP_011513074 (OMIM: 604209) PREDICTED: copine-5 isofor (543 aa)
initn: 2172 init1: 2172 opt: 2172 Z-score: 1916.6 bits: 364.5 E(85289): 5.1e-100
Smith-Waterman score: 3159; 96.6% identity (96.6% similar) in 495 aa overlap (1-478:1-495)
10 20 30 40 50 60
pF1KSD MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
70 80 90 100 110 120
130 140 150 160
pF1KSD EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNG-----------------GVPGKKCG
::::::::::::::::::::::::::::::::::: ::::::::
XP_011 EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNGSGLWMESLRTTGLEASGGVPGKKCG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KSD TIILSAEELSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TIILSAEELSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKN
190 200 210 220 230 240
230 240 250 260 270 280
pF1KSD TLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNI
250 260 270 280 290 300
290 300 310 320 330 340
pF1KSD YEVVNPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YEVVNPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPS
310 320 330 340 350 360
350 360 370 380 390 400
pF1KSD QSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGN
370 380 390 400 410 420
410 420 430 440 450 460
pF1KSD QENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDG
430 440 450 460 470 480
470 480 490 500 510 520
pF1KSD VISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFV
:::::::::::::::
XP_011 VISDMAQTKEAIVNAQPGFLCSLSLSALPLPTPFSVFLCLSMFTLPFLSCPPLPVLPLIS
490 500 510 520 530 540
>>NP_001300947 (OMIM: 604209) copine-5 isoform c [Homo s (301 aa)
initn: 1982 init1: 1982 opt: 1982 Z-score: 1753.6 bits: 333.5 E(85289): 6.2e-91
Smith-Waterman score: 1982; 100.0% identity (100.0% similar) in 301 aa overlap (293-593:1-301)
270 280 290 300 310 320
pF1KSD FIGEFTTSYRELARGQSQFNIYEVVNPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIK
::::::::::::::::::::::::::::::
NP_001 MKKKKYVNSGTVTLLSFAVESECTFLDYIK
10 20 30
330 340 350 360 370 380
pF1KSD GGTQINFTVAIDFTASNGNPSQSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGTQINFTVAIDFTASNGNPSQSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPAL
40 50 60 70 80 90
390 400 410 420 430 440
pF1KSD GFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVA
100 110 120 130 140 150
450 460 470 480 490 500
pF1KSD RNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELD
160 170 180 190 200 210
510 520 530 540 550 560
pF1KSD GDDVRISSRGKLAERDIVQFVPFRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMKAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDDVRISSRGKLAERDIVQFVPFRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMKAQG
220 230 240 250 260 270
570 580 590
pF1KSD IRPRPPPAAPTHSPSQSPARTPPASPLHTHI
:::::::::::::::::::::::::::::::
NP_001 IRPRPPPAAPTHSPSQSPARTPPASPLHTHI
280 290 300
593 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 06:46:35 2016 done: Thu Nov 3 06:46:37 2016
Total Scan time: 11.210 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]