Result of FASTA (omim) for
pF1KSDA1710
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1710, 470 aa
1>>>pF1KSDA1710 470 - 470 aa - 470 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8166+/-0.000859; mu= 13.5386+/- 0.053
mean_var=356.7108+/-68.891, 0's: 0 Z-trim(112.2): 2067 B-trim: 109 in 1/48
Lambda= 0.067907
statistics sampled from 18741 (21108) to 18741 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.558), E-opt: 0.2 (0.247), width: 16
Scan time: 8.790
The best scores are: opt bits E(85289)
NP_001070663 (OMIM: 611703) zinc finger protein 43 ( 470) 3352 343.6 7.1e-94
NP_085137 (OMIM: 611703) zinc finger protein 436 [ ( 470) 3352 343.6 7.1e-94
XP_011540503 (OMIM: 611703) PREDICTED: zinc finger ( 452) 3241 332.7 1.3e-90
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616) 1697 181.6 5.2e-45
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621) 1697 181.6 5.2e-45
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628) 1697 181.6 5.3e-45
XP_016882729 (OMIM: 604077) PREDICTED: zinc finger ( 658) 1697 181.7 5.4e-45
NP_001276330 (OMIM: 604077) zinc finger protein 13 ( 658) 1697 181.7 5.4e-45
NP_003427 (OMIM: 604077) zinc finger protein 135 i ( 670) 1697 181.7 5.4e-45
XP_005259268 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1697 181.7 5.4e-45
XP_006723426 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1697 181.7 5.4e-45
XP_006723425 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1697 181.7 5.4e-45
NP_009065 (OMIM: 604077) zinc finger protein 135 i ( 682) 1697 181.7 5.5e-45
XP_005272399 (OMIM: 601262) PREDICTED: zinc finger ( 542) 1672 179.1 2.7e-44
XP_005272398 (OMIM: 601262) PREDICTED: zinc finger ( 682) 1672 179.3 3e-44
NP_008889 (OMIM: 601262) zinc finger protein 16 [H ( 682) 1672 179.3 3e-44
XP_011515600 (OMIM: 601262) PREDICTED: zinc finger ( 682) 1672 179.3 3e-44
NP_001025147 (OMIM: 601262) zinc finger protein 16 ( 682) 1672 179.3 3e-44
XP_016881627 (OMIM: 606956) PREDICTED: zinc finger ( 474) 1660 177.8 5.7e-44
NP_005764 (OMIM: 606956) zinc finger protein 256 [ ( 627) 1660 178.0 6.5e-44
NP_694563 (OMIM: 194480) zinc finger protein 3 hom ( 502) 1654 177.3 8.8e-44
XP_016882744 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1647 176.3 1.2e-43
NP_001275691 (OMIM: 606740) zinc finger protein 18 ( 349) 1647 176.3 1.2e-43
NP_001275689 (OMIM: 606740) zinc finger protein 18 ( 349) 1647 176.3 1.2e-43
XP_016882743 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1647 176.3 1.2e-43
NP_001275690 (OMIM: 606740) zinc finger protein 18 ( 349) 1647 176.3 1.2e-43
XP_016882740 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1647 176.3 1.2e-43
XP_016882742 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1647 176.3 1.2e-43
XP_016882741 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1647 176.3 1.2e-43
XP_016882745 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1647 176.3 1.2e-43
XP_016882739 (OMIM: 606740) PREDICTED: zinc finger ( 349) 1647 176.3 1.2e-43
NP_001316385 (OMIM: 613840) zinc finger protein 30 ( 567) 1649 176.9 1.3e-43
NP_001277248 (OMIM: 613840) zinc finger protein 30 ( 617) 1649 176.9 1.4e-43
NP_065708 (OMIM: 613840) zinc finger protein 304 i ( 659) 1649 177.0 1.4e-43
XP_011525447 (OMIM: 613840) PREDICTED: zinc finger ( 664) 1649 177.0 1.4e-43
NP_001277247 (OMIM: 613840) zinc finger protein 30 ( 706) 1649 177.0 1.4e-43
NP_001278562 (OMIM: 606740) zinc finger protein 18 ( 665) 1647 176.8 1.6e-43
NP_001265438 (OMIM: 606740) zinc finger protein 18 ( 665) 1647 176.8 1.6e-43
NP_001265437 (OMIM: 606740) zinc finger protein 18 ( 667) 1647 176.8 1.6e-43
NP_001275688 (OMIM: 606740) zinc finger protein 18 ( 691) 1647 176.8 1.6e-43
NP_037388 (OMIM: 606740) zinc finger protein 180 i ( 692) 1647 176.8 1.6e-43
XP_011525582 (OMIM: 606740) PREDICTED: zinc finger ( 734) 1647 176.9 1.7e-43
XP_011513163 (OMIM: 602277) PREDICTED: zinc finger ( 675) 1642 176.3 2.3e-43
NP_001305822 (OMIM: 602277) zinc finger protein 18 ( 675) 1642 176.3 2.3e-43
NP_001305821 (OMIM: 602277) zinc finger protein 18 ( 751) 1642 176.4 2.4e-43
NP_001305820 (OMIM: 602277) zinc finger protein 18 ( 751) 1642 176.4 2.4e-43
NP_009080 (OMIM: 602277) zinc finger protein 184 i ( 751) 1642 176.4 2.4e-43
XP_005259333 (OMIM: 613905) PREDICTED: zinc finger ( 792) 1627 175.0 6.8e-43
NP_079303 (OMIM: 613905) zinc finger protein 606 [ ( 792) 1627 175.0 6.8e-43
NP_003424 (OMIM: 604074) zinc finger protein 132 [ ( 706) 1626 174.8 6.9e-43
>>NP_001070663 (OMIM: 611703) zinc finger protein 436 [H (470 aa)
initn: 3352 init1: 3352 opt: 3352 Z-score: 1806.3 bits: 343.6 E(85289): 7.1e-94
Smith-Waterman score: 3352; 100.0% identity (100.0% similar) in 470 aa overlap (1-470:1-470)
10 20 30 40 50 60
pF1KSD MAATLLMAGSQAPVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAATLLMAGSQAPVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NEVNPKQEISEDVQFGTTSERPAENAEENPESEEGFESGDRSERQWGDLTAEEWVSYPLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NEVNPKQEISEDVQFGTTSERPAENAEENPESEEGFESGDRSERQWGDLTAEEWVSYPLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD PVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQTIHTGEKPHKCNECGKSFCRLSHLIQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQTIHTGEKPHKCNECGKSFCRLSHLIQH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD TGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD PYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEKPYEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEKPYEC
370 380 390 400 410 420
430 440 450 460 470
pF1KSD VQCGKGFTQSSNLITHQRVHTGEKPYECTECEKSFSRSSALIKHKRVHTD
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQCGKGFTQSSNLITHQRVHTGEKPYECTECEKSFSRSSALIKHKRVHTD
430 440 450 460 470
>>NP_085137 (OMIM: 611703) zinc finger protein 436 [Homo (470 aa)
initn: 3352 init1: 3352 opt: 3352 Z-score: 1806.3 bits: 343.6 E(85289): 7.1e-94
Smith-Waterman score: 3352; 100.0% identity (100.0% similar) in 470 aa overlap (1-470:1-470)
10 20 30 40 50 60
pF1KSD MAATLLMAGSQAPVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 MAATLLMAGSQAPVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NEVNPKQEISEDVQFGTTSERPAENAEENPESEEGFESGDRSERQWGDLTAEEWVSYPLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 NEVNPKQEISEDVQFGTTSERPAENAEENPESEEGFESGDRSERQWGDLTAEEWVSYPLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD PVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 PVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQTIHTGEKPHKCNECGKSFCRLSHLIQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 LIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQTIHTGEKPHKCNECGKSFCRLSHLIQH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 QRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD TGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 TGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD PYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEKPYEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 PYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEKPYEC
370 380 390 400 410 420
430 440 450 460 470
pF1KSD VQCGKGFTQSSNLITHQRVHTGEKPYECTECEKSFSRSSALIKHKRVHTD
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_085 VQCGKGFTQSSNLITHQRVHTGEKPYECTECEKSFSRSSALIKHKRVHTD
430 440 450 460 470
>>XP_011540503 (OMIM: 611703) PREDICTED: zinc finger pro (452 aa)
initn: 3241 init1: 3241 opt: 3241 Z-score: 1747.7 bits: 332.7 E(85289): 1.3e-90
Smith-Waterman score: 3241; 100.0% identity (100.0% similar) in 452 aa overlap (19-470:1-452)
10 20 30 40 50 60
pF1KSD MAATLLMAGSQAPVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSE
::::::::::::::::::::::::::::::::::::::::::
XP_011 MAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSE
10 20 30 40
70 80 90 100 110 120
pF1KSD NEVNPKQEISEDVQFGTTSERPAENAEENPESEEGFESGDRSERQWGDLTAEEWVSYPLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NEVNPKQEISEDVQFGTTSERPAENAEENPESEEGFESGDRSERQWGDLTAEEWVSYPLQ
50 60 70 80 90 100
130 140 150 160 170 180
pF1KSD PVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSH
110 120 130 140 150 160
190 200 210 220 230 240
pF1KSD LIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQTIHTGEKPHKCNECGKSFCRLSHLIQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQTIHTGEKPHKCNECGKSFCRLSHLIQH
170 180 190 200 210 220
250 260 270 280 290 300
pF1KSD QRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVH
230 240 250 260 270 280
310 320 330 340 350 360
pF1KSD TGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEK
290 300 310 320 330 340
370 380 390 400 410 420
pF1KSD PYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEKPYEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEKPYEC
350 360 370 380 390 400
430 440 450 460 470
pF1KSD VQCGKGFTQSSNLITHQRVHTGEKPYECTECEKSFSRSSALIKHKRVHTD
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VQCGKGFTQSSNLITHQRVHTGEKPYECTECEKSFSRSSALIKHKRVHTD
410 420 430 440 450
>>NP_001276331 (OMIM: 604077) zinc finger protein 135 is (616 aa)
initn: 1697 init1: 1697 opt: 1697 Z-score: 929.0 bits: 181.6 E(85289): 5.2e-45
Smith-Waterman score: 1697; 62.9% identity (85.5% similar) in 345 aa overlap (125-469:215-559)
100 110 120 130 140 150
pF1KSD GFESGDRSERQWGDLTAEEWVSYPLQPVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLN
: :...::: . . :..::..:.::. :
NP_001 SALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLI
190 200 210 220 230 240
160 170 180 190 200 210
pF1KSD RHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQT
.::.::::..::.: ::::.:: : . ::.::::::.::.:.::::.: .: :: ::
NP_001 QHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLR
250 260 270 280 290 300
220 230 240 250 260 270
pF1KSD IHTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTG
:::::::..:.::::.: . : : .::: :.:::::::.::::.:.. . : ::::::::
NP_001 IHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTG
310 320 330 340 350 360
280 290 300 310 320 330
pF1KSD EKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPY
::::::.:::..::. . : .: :.::::.:: :.::::.::..:.: .:.:.:::::::
NP_001 EKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPY
370 380 390 400 410 420
340 350 360 370 380 390
pF1KSD HCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKPYECNE
.:..::. : . .::.:::: :::::::::: :::.::.:: : ::.:::::::::::.
NP_001 ECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQ
430 440 450 460 470 480
400 410 420 430 440 450
pF1KSD CWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECEKS
: :.:.. . ::.::: ::::::::: :::..:.::: :: :::.:: :::: :.:: ::
NP_001 CGRAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKS
490 500 510 520 530 540
460 470
pF1KSD FSRSSALIKHKRVHTD
::.::.: .:.:.::
NP_001 FSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHS
550 560 570 580 590 600
>>XP_016882731 (OMIM: 604077) PREDICTED: zinc finger pro (621 aa)
initn: 1697 init1: 1697 opt: 1697 Z-score: 929.0 bits: 181.6 E(85289): 5.2e-45
Smith-Waterman score: 1697; 62.9% identity (85.5% similar) in 345 aa overlap (125-469:220-564)
100 110 120 130 140 150
pF1KSD GFESGDRSERQWGDLTAEEWVSYPLQPVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLN
: :...::: . . :..::..:.::. :
XP_016 SALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLI
190 200 210 220 230 240
160 170 180 190 200 210
pF1KSD RHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQT
.::.::::..::.: ::::.:: : . ::.::::::.::.:.::::.: .: :: ::
XP_016 QHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLR
250 260 270 280 290 300
220 230 240 250 260 270
pF1KSD IHTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTG
:::::::..:.::::.: . : : .::: :.:::::::.::::.:.. . : ::::::::
XP_016 IHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTG
310 320 330 340 350 360
280 290 300 310 320 330
pF1KSD EKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPY
::::::.:::..::. . : .: :.::::.:: :.::::.::..:.: .:.:.:::::::
XP_016 EKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPY
370 380 390 400 410 420
340 350 360 370 380 390
pF1KSD HCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKPYECNE
.:..::. : . .::.:::: :::::::::: :::.::.:: : ::.:::::::::::.
XP_016 ECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQ
430 440 450 460 470 480
400 410 420 430 440 450
pF1KSD CWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECEKS
: :.:.. . ::.::: ::::::::: :::..:.::: :: :::.:: :::: :.:: ::
XP_016 CGRAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKS
490 500 510 520 530 540
460 470
pF1KSD FSRSSALIKHKRVHTD
::.::.: .:.:.::
XP_016 FSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHS
550 560 570 580 590 600
>>XP_016882730 (OMIM: 604077) PREDICTED: zinc finger pro (628 aa)
initn: 1697 init1: 1697 opt: 1697 Z-score: 929.0 bits: 181.6 E(85289): 5.3e-45
Smith-Waterman score: 1697; 62.9% identity (85.5% similar) in 345 aa overlap (125-469:227-571)
100 110 120 130 140 150
pF1KSD GFESGDRSERQWGDLTAEEWVSYPLQPVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLN
: :...::: . . :..::..:.::. :
XP_016 SALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLI
200 210 220 230 240 250
160 170 180 190 200 210
pF1KSD RHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQT
.::.::::..::.: ::::.:: : . ::.::::::.::.:.::::.: .: :: ::
XP_016 QHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLR
260 270 280 290 300 310
220 230 240 250 260 270
pF1KSD IHTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTG
:::::::..:.::::.: . : : .::: :.:::::::.::::.:.. . : ::::::::
XP_016 IHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTG
320 330 340 350 360 370
280 290 300 310 320 330
pF1KSD EKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPY
::::::.:::..::. . : .: :.::::.:: :.::::.::..:.: .:.:.:::::::
XP_016 EKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPY
380 390 400 410 420 430
340 350 360 370 380 390
pF1KSD HCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKPYECNE
.:..::. : . .::.:::: :::::::::: :::.::.:: : ::.:::::::::::.
XP_016 ECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQ
440 450 460 470 480 490
400 410 420 430 440 450
pF1KSD CWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECEKS
: :.:.. . ::.::: ::::::::: :::..:.::: :: :::.:: :::: :.:: ::
XP_016 CGRAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKS
500 510 520 530 540 550
460 470
pF1KSD FSRSSALIKHKRVHTD
::.::.: .:.:.::
XP_016 FSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHS
560 570 580 590 600 610
>>XP_016882729 (OMIM: 604077) PREDICTED: zinc finger pro (658 aa)
initn: 1697 init1: 1697 opt: 1697 Z-score: 928.8 bits: 181.7 E(85289): 5.4e-45
Smith-Waterman score: 1697; 62.9% identity (85.5% similar) in 345 aa overlap (125-469:257-601)
100 110 120 130 140 150
pF1KSD GFESGDRSERQWGDLTAEEWVSYPLQPVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLN
: :...::: . . :..::..:.::. :
XP_016 SALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLI
230 240 250 260 270 280
160 170 180 190 200 210
pF1KSD RHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQT
.::.::::..::.: ::::.:: : . ::.::::::.::.:.::::.: .: :: ::
XP_016 QHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLR
290 300 310 320 330 340
220 230 240 250 260 270
pF1KSD IHTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTG
:::::::..:.::::.: . : : .::: :.:::::::.::::.:.. . : ::::::::
XP_016 IHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTG
350 360 370 380 390 400
280 290 300 310 320 330
pF1KSD EKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPY
::::::.:::..::. . : .: :.::::.:: :.::::.::..:.: .:.:.:::::::
XP_016 EKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPY
410 420 430 440 450 460
340 350 360 370 380 390
pF1KSD HCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKPYECNE
.:..::. : . .::.:::: :::::::::: :::.::.:: : ::.:::::::::::.
XP_016 ECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQ
470 480 490 500 510 520
400 410 420 430 440 450
pF1KSD CWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECEKS
: :.:.. . ::.::: ::::::::: :::..:.::: :: :::.:: :::: :.:: ::
XP_016 CGRAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKS
530 540 550 560 570 580
460 470
pF1KSD FSRSSALIKHKRVHTD
::.::.: .:.:.::
XP_016 FSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHS
590 600 610 620 630 640
>>NP_001276330 (OMIM: 604077) zinc finger protein 135 is (658 aa)
initn: 1697 init1: 1697 opt: 1697 Z-score: 928.8 bits: 181.7 E(85289): 5.4e-45
Smith-Waterman score: 1697; 62.9% identity (85.5% similar) in 345 aa overlap (125-469:257-601)
100 110 120 130 140 150
pF1KSD GFESGDRSERQWGDLTAEEWVSYPLQPVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLN
: :...::: . . :..::..:.::. :
NP_001 SALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLI
230 240 250 260 270 280
160 170 180 190 200 210
pF1KSD RHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQT
.::.::::..::.: ::::.:: : . ::.::::::.::.:.::::.: .: :: ::
NP_001 QHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLR
290 300 310 320 330 340
220 230 240 250 260 270
pF1KSD IHTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTG
:::::::..:.::::.: . : : .::: :.:::::::.::::.:.. . : ::::::::
NP_001 IHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTG
350 360 370 380 390 400
280 290 300 310 320 330
pF1KSD EKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPY
::::::.:::..::. . : .: :.::::.:: :.::::.::..:.: .:.:.:::::::
NP_001 EKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPY
410 420 430 440 450 460
340 350 360 370 380 390
pF1KSD HCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKPYECNE
.:..::. : . .::.:::: :::::::::: :::.::.:: : ::.:::::::::::.
NP_001 ECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQ
470 480 490 500 510 520
400 410 420 430 440 450
pF1KSD CWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECEKS
: :.:.. . ::.::: ::::::::: :::..:.::: :: :::.:: :::: :.:: ::
NP_001 CGRAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKS
530 540 550 560 570 580
460 470
pF1KSD FSRSSALIKHKRVHTD
::.::.: .:.:.::
NP_001 FSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHS
590 600 610 620 630 640
>>NP_003427 (OMIM: 604077) zinc finger protein 135 isofo (670 aa)
initn: 1697 init1: 1697 opt: 1697 Z-score: 928.7 bits: 181.7 E(85289): 5.4e-45
Smith-Waterman score: 1697; 62.9% identity (85.5% similar) in 345 aa overlap (125-469:269-613)
100 110 120 130 140 150
pF1KSD GFESGDRSERQWGDLTAEEWVSYPLQPVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLN
: :...::: . . :..::..:.::. :
NP_003 SALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLI
240 250 260 270 280 290
160 170 180 190 200 210
pF1KSD RHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQT
.::.::::..::.: ::::.:: : . ::.::::::.::.:.::::.: .: :: ::
NP_003 QHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLR
300 310 320 330 340 350
220 230 240 250 260 270
pF1KSD IHTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTG
:::::::..:.::::.: . : : .::: :.:::::::.::::.:.. . : ::::::::
NP_003 IHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTG
360 370 380 390 400 410
280 290 300 310 320 330
pF1KSD EKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPY
::::::.:::..::. . : .: :.::::.:: :.::::.::..:.: .:.:.:::::::
NP_003 EKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPY
420 430 440 450 460 470
340 350 360 370 380 390
pF1KSD HCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKPYECNE
.:..::. : . .::.:::: :::::::::: :::.::.:: : ::.:::::::::::.
NP_003 ECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQ
480 490 500 510 520 530
400 410 420 430 440 450
pF1KSD CWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECEKS
: :.:.. . ::.::: ::::::::: :::..:.::: :: :::.:: :::: :.:: ::
NP_003 CGRAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKS
540 550 560 570 580 590
460 470
pF1KSD FSRSSALIKHKRVHTD
::.::.: .:.:.::
NP_003 FSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHS
600 610 620 630 640 650
>>XP_005259268 (OMIM: 604077) PREDICTED: zinc finger pro (670 aa)
initn: 1697 init1: 1697 opt: 1697 Z-score: 928.7 bits: 181.7 E(85289): 5.4e-45
Smith-Waterman score: 1697; 62.9% identity (85.5% similar) in 345 aa overlap (125-469:269-613)
100 110 120 130 140 150
pF1KSD GFESGDRSERQWGDLTAEEWVSYPLQPVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLN
: :...::: . . :..::..:.::. :
XP_005 SALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLI
240 250 260 270 280 290
160 170 180 190 200 210
pF1KSD RHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQT
.::.::::..::.: ::::.:: : . ::.::::::.::.:.::::.: .: :: ::
XP_005 QHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLR
300 310 320 330 340 350
220 230 240 250 260 270
pF1KSD IHTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTG
:::::::..:.::::.: . : : .::: :.:::::::.::::.:.. . : ::::::::
XP_005 IHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTG
360 370 380 390 400 410
280 290 300 310 320 330
pF1KSD EKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPY
::::::.:::..::. . : .: :.::::.:: :.::::.::..:.: .:.:.:::::::
XP_005 EKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPY
420 430 440 450 460 470
340 350 360 370 380 390
pF1KSD HCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKPYECNE
.:..::. : . .::.:::: :::::::::: :::.::.:: : ::.:::::::::::.
XP_005 ECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQ
480 490 500 510 520 530
400 410 420 430 440 450
pF1KSD CWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECEKS
: :.:.. . ::.::: ::::::::: :::..:.::: :: :::.:: :::: :.:: ::
XP_005 CGRAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKS
540 550 560 570 580 590
460 470
pF1KSD FSRSSALIKHKRVHTD
::.::.: .:.:.::
XP_005 FSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHS
600 610 620 630 640 650
470 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 19:07:31 2016 done: Thu Nov 3 19:07:33 2016
Total Scan time: 8.790 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]