FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KSDA1735, 472 aa 1>>>pF1KSDA1735 472 - 472 aa - 472 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.2157+/-0.00109; mu= 0.5036+/- 0.065 mean_var=248.7184+/-51.252, 0's: 0 Z-trim(110.7): 32 B-trim: 94 in 1/52 Lambda= 0.081324 statistics sampled from 11799 (11812) to 11799 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.708), E-opt: 0.2 (0.363), width: 16 Scan time: 3.110 The best scores are: opt bits E(32554) CCDS73382.1 DIXDC1 gene_id:85458|Hs108|chr11 ( 472) 3112 378.5 8.5e-105 CCDS73381.1 DIXDC1 gene_id:85458|Hs108|chr11 ( 683) 3054 371.8 1.3e-102 >>CCDS73382.1 DIXDC1 gene_id:85458|Hs108|chr11 (472 aa) initn: 3112 init1: 3112 opt: 3112 Z-score: 1994.9 bits: 378.5 E(32554): 8.5e-105 Smith-Waterman score: 3112; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472) 10 20 30 40 50 60 pF1KSD MGGTQVKCLTSPSPIHSAKSESIITQSEEKADFVIIPAEGIENRTEGTDSPLSRDWRPGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MGGTQVKCLTSPSPIHSAKSESIITQSEEKADFVIIPAEGIENRTEGTDSPLSRDWRPGS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD PGTYLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 PGTYLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD PEEQLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIKDALQQRLTQQDTSVLQLKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 PEEQLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIKDALQQRLTQQDTSVLQLKQE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD LLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQKDRLLQQHQAKLEEALRKLSDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 LLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQKDRLLQQHQAKLEEALRKLSDV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD SYHQVDLERELEHKDVLLAHCMKREADEATNYNSHNSQSNGFLLPTAGKGATSVSNRGTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 SYHQVDLERELEHKDVLLAHCMKREADEATNYNSHNSQSNGFLLPTAGKGATSVSNRGTS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD DLQLVRDALRSLRNSFSGHDPQHHTIDSLEQGISSLMERLHVMETQKKQERKVRVKSPRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 DLQLVRDALRSLRNSFSGHDPQHHTIDSLEQGISSLMERLHVMETQKKQERKVRVKSPRT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD QVGSEYRESWPPNSKLPHSQSSPTVSSTCTKVLYFTDRSLTPFMVNIPKRLEEVTLKDFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 QVGSEYRESWPPNSKLPHSQSSPTVSSTCTKVLYFTDRSLTPFMVNIPKRLEEVTLKDFK 370 380 390 400 410 420 430 440 450 460 470 pF1KSD AAIDREGNHRYHFKALDPEFGTVKEEIFHDDDAIPGWEGKIVAWVEEDHGEN :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 AAIDREGNHRYHFKALDPEFGTVKEEIFHDDDAIPGWEGKIVAWVEEDHGEN 430 440 450 460 470 >>CCDS73381.1 DIXDC1 gene_id:85458|Hs108|chr11 (683 aa) initn: 3053 init1: 3053 opt: 3054 Z-score: 1955.9 bits: 371.8 E(32554): 1.3e-102 Smith-Waterman score: 3054; 98.7% identity (99.4% similar) in 471 aa overlap (4-472:213-683) 10 20 30 pF1KSD MGGTQVKC--LTSPSPIHSAKSESIITQSEEKA .. .: ::::::::::::::::::::::: CCDS73 RNSSMDEEIENPYWSVRALVQQYEGQQRSPSESSCSSLTSPSPIHSAKSESIITQSEEKA 190 200 210 220 230 240 40 50 60 70 80 90 pF1KSD DFVIIPAEGIENRTEGTDSPLSRDWRPGSPGTYLETSWEEQLLEQQEYLEKEMEEAKKMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 DFVIIPAEGIENRTEGTDSPLSRDWRPGSPGTYLETSWEEQLLEQQEYLEKEMEEAKKMI 250 260 270 280 290 300 100 110 120 130 140 150 pF1KSD SGLQALLLNGSLPEDEQERPLALCEPGVNPEEQLIIIQSRLDQSMEENQDLKKELLKCKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 SGLQALLLNGSLPEDEQERPLALCEPGVNPEEQLIIIQSRLDQSMEENQDLKKELLKCKQ 310 320 330 340 350 360 160 170 180 190 200 210 pF1KSD EARNLQGIKDALQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 EARNLQGIKDALQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGE 370 380 390 400 410 420 220 230 240 250 260 270 pF1KSD YKKELGQKDRLLQQHQAKLEEALRKLSDVSYHQVDLERELEHKDVLLAHCMKREADEATN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 YKKELGQKDRLLQQHQAKLEEALRKLSDVSYHQVDLERELEHKDVLLAHCMKREADEATN 430 440 450 460 470 480 280 290 300 310 320 330 pF1KSD YNSHNSQSNGFLLPTAGKGATSVSNRGTSDLQLVRDALRSLRNSFSGHDPQHHTIDSLEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 YNSHNSQSNGFLLPTAGKGATSVSNRGTSDLQLVRDALRSLRNSFSGHDPQHHTIDSLEQ 490 500 510 520 530 540 340 350 360 370 380 390 pF1KSD GISSLMERLHVMETQKKQERKVRVKSPRTQVGSEYRESWPPNSKLPHSQSSPTVSSTCTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 GISSLMERLHVMETQKKQERKVRVKSPRTQVGSEYRESWPPNSKLPHSQSSPTVSSTCTK 550 560 570 580 590 600 400 410 420 430 440 450 pF1KSD VLYFTDRSLTPFMVNIPKRLEEVTLKDFKAAIDREGNHRYHFKALDPEFGTVKEEIFHDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 VLYFTDRSLTPFMVNIPKRLEEVTLKDFKAAIDREGNHRYHFKALDPEFGTVKEEIFHDD 610 620 630 640 650 660 460 470 pF1KSD DAIPGWEGKIVAWVEEDHGEN ::::::::::::::::::::: CCDS73 DAIPGWEGKIVAWVEEDHGEN 670 680 472 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 07:09:56 2016 done: Thu Nov 3 07:09:57 2016 Total Scan time: 3.110 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]