Result of FASTA (ccds) for
pF1KSDA1736
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1736, 1238 aa
1>>>pF1KSDA1736 1238 - 1238 aa - 1238 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.5819+/-0.000908; mu= 3.8806+/- 0.055
mean_var=198.6732+/-42.711, 0's: 0 Z-trim(113.3): 31 B-trim: 761 in 2/52
Lambda= 0.090992
statistics sampled from 13879 (13907) to 13879 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.726), E-opt: 0.2 (0.427), width: 16
Scan time: 5.210
The best scores are: opt bits E(32554)
CCDS73281.1 AMBRA1 gene_id:55626|Hs108|chr11 (1238) 8337 1107.6 0
CCDS58132.1 AMBRA1 gene_id:55626|Hs108|chr11 (1179) 3507 473.5 1.4e-132
CCDS31475.1 AMBRA1 gene_id:55626|Hs108|chr11 (1208) 3507 473.5 1.4e-132
>>CCDS73281.1 AMBRA1 gene_id:55626|Hs108|chr11 (1238 aa)
initn: 8337 init1: 8337 opt: 8337 Z-score: 5920.3 bits: 1107.6 E(32554): 0
Smith-Waterman score: 8337; 100.0% identity (100.0% similar) in 1238 aa overlap (1-1238:1-1238)
10 20 30 40 50 60
pF1KSD MKVVPEKNAVRILWGRERGARAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MKVVPEKNAVRILWGRERGARAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 FSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD HNFLHMLSSRSSGIQVGEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HNFLHMLSSRSSGIQVGEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD CCQHLGILCLCSRCSGTRVPSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 CCQHLGILCLCSRCSGTRVPSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD DQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREIAPGLTGSEWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREIAPGLTGSEWT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD RTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLATE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD SDGGNGSSQNNSGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SDGGNGSSQNNSGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIES
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD ERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSSW
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD QVPSSFESVPSSGSQLPPLERTEGQTPSSSRLELSSSASPQEERTVGVAFNQETGHWERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QVPSSFESVPSSGSQLPPLERTEGQTPSSSRLELSSSASPQEERTVGVAFNQETGHWERI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD YTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPAR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD DNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD GAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISAD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD GQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD ASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEP
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD GLGLAYGTNKGDLVICRPEALNSGVEYYWDQLNETVFTVHSNSRSSERPGTSRATWRTDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GLGLAYGTNKGDLVICRPEALNSGVEYYWDQLNETVFTVHSNSRSSERPGTSRATWRTDR
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD DMGLMNAIGLQPRNPATSVTSQGTQTLALQLQNAETQTEREVPEPGTAASGPGEGEGSEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DMGLMNAIGLQPRNPATSVTSQGTQTLALQLQNAETQTEREVPEPGTAASGPGEGEGSEY
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD GASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTEPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTEPGA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KSD AHTSSPQPSTSRGLLPEAGQLAERGLSPRTASWDQPGTPGREPTQPTLPSSSPVPIPVSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AHTSSPQPSTSRGLLPEAGQLAERGLSPRTASWDQPGTPGREPTQPTLPSSSPVPIPVSL
1150 1160 1170 1180 1190 1200
1210 1220 1230
pF1KSD PSAEGPTLHCELTNNNHLLDGGSSRGDAAGPRGEPRNR
::::::::::::::::::::::::::::::::::::::
CCDS73 PSAEGPTLHCELTNNNHLLDGGSSRGDAAGPRGEPRNR
1210 1220 1230
>>CCDS58132.1 AMBRA1 gene_id:55626|Hs108|chr11 (1179 aa)
initn: 5770 init1: 3483 opt: 3507 Z-score: 2493.9 bits: 473.5 E(32554): 1.4e-132
Smith-Waterman score: 7252; 88.7% identity (89.2% similar) in 1269 aa overlap (1-1238:1-1179)
10 20 30 40 50 60
pF1KSD MKVVPEKNAVRILWGRERGARAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MKVVPEKNAVRILWGRERGARAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD HNFLHMLSSRSSGIQVGEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTAE
:::::::::::::::
CCDS58 HNFLHMLSSRSSGIQ---------------------------------------------
250
310 320 330 340 350 360
pF1KSD CCQHLGILCLCSRCSGTRVPSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQQ
:::::::::::::::
CCDS58 ---------------------------------------------TEPFHPPEQASSTQQ
260 270
370 380 390 400 410 420
pF1KSD DQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREIAPGLTGSEWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREIAPGLTGSEWT
280 290 300 310 320 330
430 440 450 460 470 480
pF1KSD RTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLATE
340 350 360 370 380 390
490 500 510 520 530 540
pF1KSD SDGGNGSSQNNSGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SDGGNGSSQNNSGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIES
400 410 420 430 440 450
550 560 570 580 590 600
pF1KSD ERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSSW
460 470 480 490 500 510
610 620 630 640 650 660
pF1KSD QVPSSFESVPSSGSQLPPLERTEGQTPSSSRLELSSSASPQEERTVGVAFNQETGHWERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QVPSSFESVPSSGSQLPPLERTEGQTPSSSRLELSSSASPQEERTVGVAFNQETGHWERI
520 530 540 550 560 570
670 680 690 700 710
pF1KSD YTQSSRSGTVSQEALHQDMPEESSEEDSLRR----RLLESSLIS-LSRYDGAGSREHPIY
::::::::::::::::::::::::::::::: . .:. ::: :. .:
CCDS58 YTQSSRSGTVSQEALHQDMPEESSEEDSLRRLSPAAYYAQRMIQYLSRRDSIRQRSMRYQ
580 590 600 610 620 630
720 730 740
pF1KSD PDPAR--------------------------DNGDRSRHRAPRNARMSAPSLGRFVPRRF
. : :::::::::::::::::::::::::::::
CCDS58 QNRLRSSTSSSSSDNQGPSVEGTDLEFEDFEDNGDRSRHRAPRNARMSAPSLGRFVPRRF
640 650 660 670 680 690
750 760 770 780 790 800
pF1KSD LLPEYLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LLPEYLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTK
700 710 720 730 740 750
810 820 830 840 850 860
pF1KSD FDLPEISNASVNVLVQNCKIYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FDLPEISNASVNVLVQNCKIYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPH
760 770 780 790 800 810
870 880 890 900 910 920
pF1KSD NLGEMLYTKRFGPNAISVSLSPMGRYVMVGLASRRILLHPSTEHMVAQVFRLQQAHGGET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NLGEMLYTKRFGPNAISVSLSPMGRYVMVGLASRRILLHPSTEHMVAQVFRLQQAHGGET
820 830 840 850 860 870
930 940 950 960 970 980
pF1KSD SMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPEALNSGVEYYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPEALNSGVEYYW
880 890 900 910 920 930
990 1000 1010 1020 1030 1040
pF1KSD DQLNETVFTVHSNSRSSERPGTSRATWRTDRDMGLMNAIGLQPRNPATSVTSQGTQTLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DQLNETVFTVHSNSRSSERPGTSRATWRTDRDMGLMNAIGLQPRNPATSVTSQGTQTLAL
940 950 960 970 980 990
1050 1060 1070 1080 1090 1100
pF1KSD QLQNAETQTEREVPEPGTAASGPGEGEGSEYGASGEDALSRIQRLMAEGGMTAVVQREQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QLQNAETQTEREVPEPGTAASGPGEGEGSEYGASGEDALSRIQRLMAEGGMTAVVQREQS
1000 1010 1020 1030 1040 1050
1110 1120 1130 1140 1150 1160
pF1KSD TTMASMGGFGNNIIVSHRIHRSSQTGTEPGAAHTSSPQPSTSRGLLPEAGQLAERGLSPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TTMASMGGFGNNIIVSHRIHRSSQTGTEPGAAHTSSPQPSTSRGLLPEAGQLAERGLSPR
1060 1070 1080 1090 1100 1110
1170 1180 1190 1200 1210 1220
pF1KSD TASWDQPGTPGREPTQPTLPSSSPVPIPVSLPSAEGPTLHCELTNNNHLLDGGSSRGDAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TASWDQPGTPGREPTQPTLPSSSPVPIPVSLPSAEGPTLHCELTNNNHLLDGGSSRGDAA
1120 1130 1140 1150 1160 1170
1230
pF1KSD GPRGEPRNR
:::::::::
CCDS58 GPRGEPRNR
>>CCDS31475.1 AMBRA1 gene_id:55626|Hs108|chr11 (1208 aa)
initn: 5963 init1: 3483 opt: 3507 Z-score: 2493.7 bits: 473.5 E(32554): 1.4e-132
Smith-Waterman score: 7382; 88.4% identity (88.4% similar) in 1298 aa overlap (1-1238:1-1208)
10 20 30 40 50 60
pF1KSD MKVVPEKNAVRILWGRERGARAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MKVVPEKNAVRILWGRERGARAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD FSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD HNFLHMLSSRSSGIQVGEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTAE
:::::::::::::::
CCDS31 HNFLHMLSSRSSGIQ---------------------------------------------
250
310 320 330 340 350 360
pF1KSD CCQHLGILCLCSRCSGTRVPSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQQ
:::::::::::::::
CCDS31 ---------------------------------------------TEPFHPPEQASSTQQ
260 270
370 380 390 400 410 420
pF1KSD DQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREIAPGLTGSEWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREIAPGLTGSEWT
280 290 300 310 320 330
430 440 450 460 470 480
pF1KSD RTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLATE
340 350 360 370 380 390
490 500 510 520 530 540
pF1KSD SDGGNGSSQNNSGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SDGGNGSSQNNSGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIES
400 410 420 430 440 450
550 560 570 580 590 600
pF1KSD ERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSSW
460 470 480 490 500 510
610 620 630 640 650 660
pF1KSD QVPSSFESVPSSGSQLPPLERTEGQTPSSSRLELSSSASPQEERTVGVAFNQETGHWERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QVPSSFESVPSSGSQLPPLERTEGQTPSSSRLELSSSASPQEERTVGVAFNQETGHWERI
520 530 540 550 560 570
670 680 690 700 710 720
pF1KSD YTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 YTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPAR
580 590 600 610 620 630
pF1KSD ------------------------------------------------------------
CCDS31 LSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGPSVEGTDLEFEDFE
640 650 660 670 680 690
730 740 750 760 770 780
pF1KSD DNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLA
700 710 720 730 740 750
790 800 810 820 830 840
pF1KSD GAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISAD
760 770 780 790 800 810
850 860 870 880 890 900
pF1KSD GQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGL
820 830 840 850 860 870
910 920 930 940 950 960
pF1KSD ASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEP
880 890 900 910 920 930
970 980 990 1000 1010 1020
pF1KSD GLGLAYGTNKGDLVICRPEALNSGVEYYWDQLNETVFTVHSNSRSSERPGTSRATWRTDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GLGLAYGTNKGDLVICRPEALNSGVEYYWDQLNETVFTVHSNSRSSERPGTSRATWRTDR
940 950 960 970 980 990
1030 1040 1050 1060 1070 1080
pF1KSD DMGLMNAIGLQPRNPATSVTSQGTQTLALQLQNAETQTEREVPEPGTAASGPGEGEGSEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DMGLMNAIGLQPRNPATSVTSQGTQTLALQLQNAETQTEREVPEPGTAASGPGEGEGSEY
1000 1010 1020 1030 1040 1050
1090 1100 1110 1120 1130 1140
pF1KSD GASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTEPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTEPGA
1060 1070 1080 1090 1100 1110
1150 1160 1170 1180 1190 1200
pF1KSD AHTSSPQPSTSRGLLPEAGQLAERGLSPRTASWDQPGTPGREPTQPTLPSSSPVPIPVSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 AHTSSPQPSTSRGLLPEAGQLAERGLSPRTASWDQPGTPGREPTQPTLPSSSPVPIPVSL
1120 1130 1140 1150 1160 1170
1210 1220 1230
pF1KSD PSAEGPTLHCELTNNNHLLDGGSSRGDAAGPRGEPRNR
::::::::::::::::::::::::::::::::::::::
CCDS31 PSAEGPTLHCELTNNNHLLDGGSSRGDAAGPRGEPRNR
1180 1190 1200
1238 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:10:42 2016 done: Thu Nov 3 07:10:42 2016
Total Scan time: 5.210 Total Display time: 0.170
Function used was FASTA [36.3.4 Apr, 2011]