Result of FASTA (omim) for
pF1KSDA1778
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1778, 325 aa
1>>>pF1KSDA1778 325 - 325 aa - 325 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1957+/-0.000283; mu= 9.8812+/- 0.018
mean_var=155.1441+/-31.601, 0's: 0 Z-trim(123.5): 49 B-trim: 791 in 1/58
Lambda= 0.102969
statistics sampled from 43271 (43333) to 43271 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.81), E-opt: 0.2 (0.508), width: 16
Scan time: 9.770
The best scores are: opt bits E(85289)
NP_612453 (OMIM: 610521) BTB/POZ domain-containing ( 325) 2201 337.8 1.8e-92
XP_005268550 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 599 99.9 9.8e-21
XP_011535973 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 599 99.9 9.8e-21
XP_005268549 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 599 99.9 9.8e-21
NP_065819 (OMIM: 613423) BTB/POZ domain-containing ( 428) 599 99.9 9.8e-21
XP_006714852 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 599 99.9 9.8e-21
XP_011535974 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 304) 593 98.9 1.4e-20
XP_011535975 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 286) 589 98.3 2e-20
NP_955751 (OMIM: 607947) potassium channel regulat ( 229) 260 49.3 8.9e-06
NP_775876 (OMIM: 607947) potassium channel regulat ( 272) 260 49.4 1e-05
NP_076981 (OMIM: 615240) BTB/POZ domain-containing ( 234) 258 49.1 1.1e-05
XP_011525599 (OMIM: 615240) PREDICTED: BTB/POZ dom ( 283) 258 49.1 1.3e-05
NP_001123466 (OMIM: 615240) BTB/POZ domain-contain ( 283) 258 49.1 1.3e-05
NP_001123467 (OMIM: 615240) BTB/POZ domain-contain ( 283) 258 49.1 1.3e-05
XP_016882772 (OMIM: 615240) PREDICTED: BTB/POZ dom ( 283) 258 49.1 1.3e-05
XP_011525600 (OMIM: 615240) PREDICTED: BTB/POZ dom ( 283) 258 49.1 1.3e-05
XP_016881197 (OMIM: 181270,613420) PREDICTED: BTB/ ( 257) 235 45.7 0.00013
NP_001245150 (OMIM: 181270,613420) BTB/POZ domain- ( 257) 235 45.7 0.00013
NP_945342 (OMIM: 181270,613420) BTB/POZ domain-con ( 257) 235 45.7 0.00013
NP_001129677 (OMIM: 181270,613420) BTB/POZ domain- ( 257) 235 45.7 0.00013
NP_001245151 (OMIM: 181270,613420) BTB/POZ domain- ( 265) 235 45.7 0.00013
NP_001136202 (OMIM: 181270,613420) BTB/POZ domain- ( 865) 235 46.1 0.00031
NP_001161433 (OMIM: 611725,611726) BTB/POZ domain- ( 288) 215 42.7 0.0011
NP_694578 (OMIM: 611725,611726) BTB/POZ domain-con ( 289) 215 42.7 0.0011
NP_061865 (OMIM: 611285) BTB/POZ domain-containing ( 234) 202 40.7 0.0035
XP_011522877 (OMIM: 613422) PREDICTED: BTB/POZ dom ( 226) 197 40.0 0.0058
NP_056168 (OMIM: 613422) BTB/POZ domain-containing ( 263) 197 40.0 0.0065
>>NP_612453 (OMIM: 610521) BTB/POZ domain-containing pro (325 aa)
initn: 2201 init1: 2201 opt: 2201 Z-score: 1781.0 bits: 337.8 E(85289): 1.8e-92
Smith-Waterman score: 2201; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KSD MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD WRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 WRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD ELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 ELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 LASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD KTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 KTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTC
250 260 270 280 290 300
310 320
pF1KSD AFASSTDQSEDKIWTSYTEYVFCRE
:::::::::::::::::::::::::
NP_612 AFASSTDQSEDKIWTSYTEYVFCRE
310 320
>>XP_005268550 (OMIM: 613423) PREDICTED: BTB/POZ domain- (428 aa)
initn: 1086 init1: 515 opt: 599 Z-score: 493.2 bits: 99.9 E(85289): 9.8e-21
Smith-Waterman score: 1033; 56.3% identity (73.8% similar) in 302 aa overlap (26-325:17-279)
10 20 30 40 50 60
pF1KSD MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
:: : ::..:::::::::: ::. :..:.: :::
XP_005 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLL
10 20 30 40 50
70 80 90 100 110
pF1KSD WRMFTQQQP--QELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAE
:.::. .. ..::.:::::::.:::::::::::::::: :.::::.:::..::.::::
XP_005 WKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD YFELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPT
::.::.::. : .:.. .: ::. . : :: :. .
XP_005 YFQLPDLVKLL-TPDEIKQSP--------------DEFCHSDF------EDASQGSDT--
120 130 140
180 190 200 210 220 230
pF1KSD LELASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITV
: . ::. : ..:. :.::.::::: :.::..::::::::: :: :
XP_005 -----R---------ICPPSSLLPADRKWGFITVGYRGSCTLGREGQADAKFRRVPRILV
150 160 170 180 190
240 250 260 270 280 290
pF1KSD CGKTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTG
::. ::::::::.:::::::::: :::::::.::::. ::.::: ::: :::::::.:.
XP_005 CGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSV
200 210 220 230 240 250
300 310 320
pF1KSD TCAFASSTDQSEDKIWTSYTEYVFCRE
: .: . . ..::::.::::::: ::
XP_005 TASFIN--QYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKEGESGTSCNDLST
260 270 280 290 300 310
>>XP_011535973 (OMIM: 613423) PREDICTED: BTB/POZ domain- (428 aa)
initn: 1086 init1: 515 opt: 599 Z-score: 493.2 bits: 99.9 E(85289): 9.8e-21
Smith-Waterman score: 1033; 56.3% identity (73.8% similar) in 302 aa overlap (26-325:17-279)
10 20 30 40 50 60
pF1KSD MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
:: : ::..:::::::::: ::. :..:.: :::
XP_011 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLL
10 20 30 40 50
70 80 90 100 110
pF1KSD WRMFTQQQP--QELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAE
:.::. .. ..::.:::::::.:::::::::::::::: :.::::.:::..::.::::
XP_011 WKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD YFELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPT
::.::.::. : .:.. .: ::. . : :: :. .
XP_011 YFQLPDLVKLL-TPDEIKQSP--------------DEFCHSDF------EDASQGSDT--
120 130 140
180 190 200 210 220 230
pF1KSD LELASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITV
: . ::. : ..:. :.::.::::: :.::..::::::::: :: :
XP_011 -----R---------ICPPSSLLPADRKWGFITVGYRGSCTLGREGQADAKFRRVPRILV
150 160 170 180 190
240 250 260 270 280 290
pF1KSD CGKTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTG
::. ::::::::.:::::::::: :::::::.::::. ::.::: ::: :::::::.:.
XP_011 CGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSV
200 210 220 230 240 250
300 310 320
pF1KSD TCAFASSTDQSEDKIWTSYTEYVFCRE
: .: . . ..::::.::::::: ::
XP_011 TASFIN--QYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKEGESGTSCNDLST
260 270 280 290 300 310
>>XP_005268549 (OMIM: 613423) PREDICTED: BTB/POZ domain- (428 aa)
initn: 1086 init1: 515 opt: 599 Z-score: 493.2 bits: 99.9 E(85289): 9.8e-21
Smith-Waterman score: 1033; 56.3% identity (73.8% similar) in 302 aa overlap (26-325:17-279)
10 20 30 40 50 60
pF1KSD MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
:: : ::..:::::::::: ::. :..:.: :::
XP_005 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLL
10 20 30 40 50
70 80 90 100 110
pF1KSD WRMFTQQQP--QELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAE
:.::. .. ..::.:::::::.:::::::::::::::: :.::::.:::..::.::::
XP_005 WKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD YFELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPT
::.::.::. : .:.. .: ::. . : :: :. .
XP_005 YFQLPDLVKLL-TPDEIKQSP--------------DEFCHSDF------EDASQGSDT--
120 130 140
180 190 200 210 220 230
pF1KSD LELASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITV
: . ::. : ..:. :.::.::::: :.::..::::::::: :: :
XP_005 -----R---------ICPPSSLLPADRKWGFITVGYRGSCTLGREGQADAKFRRVPRILV
150 160 170 180 190
240 250 260 270 280 290
pF1KSD CGKTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTG
::. ::::::::.:::::::::: :::::::.::::. ::.::: ::: :::::::.:.
XP_005 CGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSV
200 210 220 230 240 250
300 310 320
pF1KSD TCAFASSTDQSEDKIWTSYTEYVFCRE
: .: . . ..::::.::::::: ::
XP_005 TASFIN--QYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKEGESGTSCNDLST
260 270 280 290 300 310
>>NP_065819 (OMIM: 613423) BTB/POZ domain-containing pro (428 aa)
initn: 1086 init1: 515 opt: 599 Z-score: 493.2 bits: 99.9 E(85289): 9.8e-21
Smith-Waterman score: 1033; 56.3% identity (73.8% similar) in 302 aa overlap (26-325:17-279)
10 20 30 40 50 60
pF1KSD MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
:: : ::..:::::::::: ::. :..:.: :::
NP_065 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLL
10 20 30 40 50
70 80 90 100 110
pF1KSD WRMFTQQQP--QELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAE
:.::. .. ..::.:::::::.:::::::::::::::: :.::::.:::..::.::::
NP_065 WKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD YFELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPT
::.::.::. : .:.. .: ::. . : :: :. .
NP_065 YFQLPDLVKLL-TPDEIKQSP--------------DEFCHSDF------EDASQGSDT--
120 130 140
180 190 200 210 220 230
pF1KSD LELASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITV
: . ::. : ..:. :.::.::::: :.::..::::::::: :: :
NP_065 -----R---------ICPPSSLLPADRKWGFITVGYRGSCTLGREGQADAKFRRVPRILV
150 160 170 180 190
240 250 260 270 280 290
pF1KSD CGKTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTG
::. ::::::::.:::::::::: :::::::.::::. ::.::: ::: :::::::.:.
NP_065 CGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSV
200 210 220 230 240 250
300 310 320
pF1KSD TCAFASSTDQSEDKIWTSYTEYVFCRE
: .: . . ..::::.::::::: ::
NP_065 TASFIN--QYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKEGESGTSCNDLST
260 270 280 290 300 310
>>XP_006714852 (OMIM: 613423) PREDICTED: BTB/POZ domain- (428 aa)
initn: 1086 init1: 515 opt: 599 Z-score: 493.2 bits: 99.9 E(85289): 9.8e-21
Smith-Waterman score: 1033; 56.3% identity (73.8% similar) in 302 aa overlap (26-325:17-279)
10 20 30 40 50 60
pF1KSD MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
:: : ::..:::::::::: ::. :..:.: :::
XP_006 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLL
10 20 30 40 50
70 80 90 100 110
pF1KSD WRMFTQQQP--QELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAE
:.::. .. ..::.:::::::.:::::::::::::::: :.::::.:::..::.::::
XP_006 WKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD YFELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPT
::.::.::. : .:.. .: ::. . : :: :. .
XP_006 YFQLPDLVKLL-TPDEIKQSP--------------DEFCHSDF------EDASQGSDT--
120 130 140
180 190 200 210 220 230
pF1KSD LELASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITV
: . ::. : ..:. :.::.::::: :.::..::::::::: :: :
XP_006 -----R---------ICPPSSLLPADRKWGFITVGYRGSCTLGREGQADAKFRRVPRILV
150 160 170 180 190
240 250 260 270 280 290
pF1KSD CGKTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTG
::. ::::::::.:::::::::: :::::::.::::. ::.::: ::: :::::::.:.
XP_006 CGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSV
200 210 220 230 240 250
300 310 320
pF1KSD TCAFASSTDQSEDKIWTSYTEYVFCRE
: .: . . ..::::.::::::: ::
XP_006 TASFIN--QYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKEGESGTSCNDLST
260 270 280 290 300 310
>>XP_011535974 (OMIM: 613423) PREDICTED: BTB/POZ domain- (304 aa)
initn: 1076 init1: 515 opt: 593 Z-score: 490.4 bits: 98.9 E(85289): 1.4e-20
Smith-Waterman score: 1027; 55.8% identity (73.4% similar) in 301 aa overlap (26-324:17-278)
10 20 30 40 50 60
pF1KSD MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
:: : ::..:::::::::: ::. :..:.: :::
XP_011 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLL
10 20 30 40 50
70 80 90 100 110
pF1KSD WRMFTQQQP--QELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAE
:.::. .. ..::.:::::::.:::::::::::::::: :.::::.:::..::.::::
XP_011 WKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD YFELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPT
::.::.::. : .:.. .: ::. . : :: :. .
XP_011 YFQLPDLVKLL-TPDEIKQSP--------------DEFCHSDF------EDASQGSDT--
120 130 140
180 190 200 210 220 230
pF1KSD LELASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITV
. ::. : ..:. :.::.::::: :.::..::::::::: :: :
XP_011 --------------RICPPSSLLPADRKWGFITVGYRGSCTLGREGQADAKFRRVPRILV
150 160 170 180 190
240 250 260 270 280 290
pF1KSD CGKTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTG
::. ::::::::.:::::::::: :::::::.::::. ::.::: ::: :::::::.:.
XP_011 CGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSV
200 210 220 230 240 250
300 310 320
pF1KSD TCAFASSTDQSEDKIWTSYTEYVFCRE
: .: .. ..::::.::::::: :
XP_011 TASFINQ--YTDDKIWSSYTEYVFYRCVLYNINLLYKIRASRGGEGRNSMIS
260 270 280 290 300
>>XP_011535975 (OMIM: 613423) PREDICTED: BTB/POZ domain- (286 aa)
initn: 1076 init1: 515 opt: 589 Z-score: 487.5 bits: 98.3 E(85289): 2e-20
Smith-Waterman score: 1023; 55.9% identity (73.6% similar) in 299 aa overlap (26-322:17-276)
10 20 30 40 50 60
pF1KSD MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
:: : ::..:::::::::: ::. :..:.: :::
XP_011 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLL
10 20 30 40 50
70 80 90 100 110
pF1KSD WRMFTQQQP--QELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAE
:.::. .. ..::.:::::::.:::::::::::::::: :.::::.:::..::.::::
XP_011 WKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD YFELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPT
::.::.::. : .:.. .: ::. . : :: :. .
XP_011 YFQLPDLVKLL-TPDEIKQSP--------------DEFCHSDF------EDASQGSDTR-
120 130 140
180 190 200 210 220 230
pF1KSD LELASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITV
. ::. : ..:. :.::.::::: :.::..::::::::: :: :
XP_011 ---------------ICPPSSLLPADRKWGFITVGYRGSCTLGREGQADAKFRRVPRILV
150 160 170 180 190
240 250 260 270 280 290
pF1KSD CGKTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTG
::. ::::::::.:::::::::: :::::::.::::. ::.::: ::: :::::::.:.
XP_011 CGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSV
200 210 220 230 240 250
300 310 320
pF1KSD TCAFASSTDQSEDKIWTSYTEYVFCRE
: .: .. ..::::.:::::::
XP_011 TASFINQ--YTDDKIWSSYTEYVFYPLSTVLIAT
260 270 280
>>NP_955751 (OMIM: 607947) potassium channel regulatory (229 aa)
initn: 269 init1: 179 opt: 260 Z-score: 224.7 bits: 49.3 E(85289): 8.9e-06
Smith-Waterman score: 260; 46.2% identity (67.9% similar) in 106 aa overlap (34-137:5-107)
10 20 30 40 50 60
pF1KSD ADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRM
..: :::::....:: :. . : : : ::
NP_955 MSSQELVTLNVGGKIFTTRFSTIKQFPASRLARM
10 20 30
70 80 90 100 110 120
pF1KSD FTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELP
. . . ::. . :..:.:::: :: .:::.:: ::.:: : . :::::: ..::
NP_955 L-DGRDQEF-KMVGGQIFVDRDGDLFSFILDFLRTHQLLLPTEFSDYLRLQREALFYELR
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD ELVRRLGAPQ--QPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLEL
:: :. : :: :
NP_955 SLVDLLN-PYLLQPRPALVEVHFLSRNTQAFFRVFGSCSKTIEMLTGRITVFTEQPSAPT
100 110 120 130 140 150
>>NP_775876 (OMIM: 607947) potassium channel regulatory (272 aa)
initn: 292 init1: 179 opt: 260 Z-score: 223.7 bits: 49.4 E(85289): 1e-05
Smith-Waterman score: 260; 46.2% identity (67.9% similar) in 106 aa overlap (34-137:5-107)
10 20 30 40 50 60
pF1KSD ADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRM
..: :::::....:: :. . : : : ::
NP_775 MSSQELVTLNVGGKIFTTRFSTIKQFPASRLARM
10 20 30
70 80 90 100 110 120
pF1KSD FTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELP
. . . ::. . :..:.:::: :: .:::.:: ::.:: : . :::::: ..::
NP_775 L-DGRDQEF-KMVGGQIFVDRDGDLFSFILDFLRTHQLLLPTEFSDYLRLQREALFYELR
40 50 60 70 80 90
130 140 150 160 170 180
pF1KSD ELVRRLGAPQ--QPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLEL
:: :. : :: :
NP_775 SLVDLLN-PYLLQPRPALVEVHFLSRNTQAFFRVFGSCSKTIEMLTGRITVFTEQPSAPT
100 110 120 130 140 150
325 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:16:28 2016 done: Thu Nov 3 07:16:29 2016
Total Scan time: 9.770 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]