Result of FASTA (omim) for
pF1KSDA1823
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1823, 365 aa
1>>>pF1KSDA1823 365 - 365 aa - 365 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5698+/-0.00035; mu= 12.1230+/- 0.022
mean_var=118.6235+/-24.411, 0's: 0 Z-trim(117.6): 89 B-trim: 1678 in 1/58
Lambda= 0.117758
statistics sampled from 29721 (29810) to 29721 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.35), width: 16
Scan time: 8.890
The best scores are: opt bits E(85289)
NP_001015877 (OMIM: 300414,301900) PHD finger prot ( 365) 2512 437.5 2.3e-122
NP_115834 (OMIM: 300414,301900) PHD finger protein ( 365) 2512 437.5 2.3e-122
NP_115711 (OMIM: 300414,301900) PHD finger protein ( 312) 1909 335.0 1.4e-91
NP_001035534 (OMIM: 147050,600807,607796) PHD fing ( 292) 311 63.5 7e-10
NP_001035533 (OMIM: 147050,600807,607796) PHD fing ( 331) 311 63.5 7.7e-10
XP_011535228 (OMIM: 611299) PREDICTED: G2/M phase- ( 667) 295 61.0 8.7e-09
XP_011535227 (OMIM: 611299) PREDICTED: G2/M phase- ( 706) 295 61.1 9.1e-09
NP_060239 (OMIM: 611299) G2/M phase-specific E3 ub ( 706) 295 61.1 9.1e-09
NP_001295026 (OMIM: 611299) G2/M phase-specific E3 ( 660) 214 47.3 0.00012
XP_006718902 (OMIM: 159555,605130) PREDICTED: hist (3133) 220 48.8 0.0002
XP_011541135 (OMIM: 159555,605130) PREDICTED: hist (3166) 220 48.8 0.0002
NP_005924 (OMIM: 159555,605130) histone-lysine N-m (3969) 220 48.9 0.00024
NP_001184033 (OMIM: 159555,605130) histone-lysine (3972) 220 48.9 0.00024
XP_011541133 (OMIM: 159555,605130) PREDICTED: hist (4002) 220 48.9 0.00024
XP_011541132 (OMIM: 159555,605130) PREDICTED: hist (4004) 220 48.9 0.00024
XP_011541131 (OMIM: 159555,605130) PREDICTED: hist (4005) 220 48.9 0.00024
XP_016883035 (OMIM: 606834) PREDICTED: histone-lys (1703) 211 47.1 0.00036
XP_016883034 (OMIM: 606834) PREDICTED: histone-lys (2527) 211 47.2 0.00048
XP_011525863 (OMIM: 606834) PREDICTED: histone-lys (2527) 211 47.2 0.00048
XP_011525864 (OMIM: 606834) PREDICTED: histone-lys (2628) 211 47.2 0.0005
XP_016883033 (OMIM: 606834) PREDICTED: histone-lys (2685) 211 47.2 0.00051
NP_055542 (OMIM: 606834) histone-lysine N-methyltr (2715) 211 47.2 0.00051
>>NP_001015877 (OMIM: 300414,301900) PHD finger protein (365 aa)
initn: 2512 init1: 2512 opt: 2512 Z-score: 2317.9 bits: 437.5 E(85289): 2.3e-122
Smith-Waterman score: 2512; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:1-365)
10 20 30 40 50 60
pF1KSD MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD SLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD STSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD YHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQ
310 320 330 340 350 360
pF1KSD QLNGN
:::::
NP_001 QLNGN
>>NP_115834 (OMIM: 300414,301900) PHD finger protein 6 i (365 aa)
initn: 2512 init1: 2512 opt: 2512 Z-score: 2317.9 bits: 437.5 E(85289): 2.3e-122
Smith-Waterman score: 2512; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:1-365)
10 20 30 40 50 60
pF1KSD MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD SLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 SLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 QGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD STSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 STSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD YHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 YHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQ
310 320 330 340 350 360
pF1KSD QLNGN
:::::
NP_115 QLNGN
>>NP_115711 (OMIM: 300414,301900) PHD finger protein 6 i (312 aa)
initn: 1908 init1: 984 opt: 1909 Z-score: 1765.2 bits: 335.0 E(85289): 1.4e-91
Smith-Waterman score: 1909; 95.6% identity (96.3% similar) in 295 aa overlap (1-292:1-295)
10 20 30 40 50 60
pF1KSD MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD SLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 SLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPS
70 80 90 100 110 120
130 140 150 160 170
pF1KSD QGIYMVYCRKHKKTAHNSEA-DLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDT
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
NP_115 QGIYMVYCRKHKKTAHNSEAADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDT
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD RSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 RSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAH
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD YKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCT--LCSQPGATIGCEIKAC
::::::::::::::::::::::::::::::::::::::: :. .: : :
NP_115 YKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMVCSFYICYATLHLICCFKFRV
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD VKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQL
NP_115 HPKFIQSSENLK
310
>>NP_001035534 (OMIM: 147050,600807,607796) PHD finger p (292 aa)
initn: 376 init1: 258 opt: 311 Z-score: 298.4 bits: 63.5 E(85289): 7e-10
Smith-Waterman score: 348; 39.8% identity (74.8% similar) in 123 aa overlap (14-133:3-122)
10 20 30 40 50 60
pF1KSD MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNE
.: :..: .: : . : .......:::..:.:.::.:: . :..
NP_001 MEKRTCALCP--KDVEYNVLYFAQSENIAAHENCLLYSSGLVECE-DQD
10 20 30 40
70 80 90 100 110
pF1KSD SLG---GFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIRE
:. .:..:.:.:::.:: :: :..:: :::.:::.:.:...::. :: .: : .
NP_001 PLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQS
50 60 70 80 90 100
120 130 140 150 160 170
pF1KSD KPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSE
.::: . :..: .
NP_001 DGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQPPETMKCNTFIRQVK
110 120 130 140 150 160
>>NP_001035533 (OMIM: 147050,600807,607796) PHD finger p (331 aa)
initn: 376 init1: 258 opt: 311 Z-score: 297.6 bits: 63.5 E(85289): 7.7e-10
Smith-Waterman score: 352; 37.5% identity (72.1% similar) in 136 aa overlap (1-133:29-161)
10 20 30
pF1KSD MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLL
. ..: : ..: :..: .: : . :
NP_001 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCP--KDVEYNVLY
10 20 30 40 50
40 50 60 70 80
pF1KSD ISENQKVAAHHKCMLFSSALVSSHSDNESLG---GFSIEDVQKEIKRGTKLMCSLCHCPG
.......:::..:.:.::.:: . :.. :. .:..:.:.:::.:: :: :..:: :
NP_001 FAQSENIAAHENCLLYSSGLVECE-DQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRG
60 70 80 90 100 110
90 100 110 120 130 140
pF1KSD ATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEH
::.:::.:.:...::. :: .: : . .::: . :..: .
NP_001 ATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRK
120 130 140 150 160 170
150 160 170 180 190 200
pF1KSD ELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTR
NP_001 RGRKKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEI
180 190 200 210 220 230
>>XP_011535228 (OMIM: 611299) PREDICTED: G2/M phase-spec (667 aa)
initn: 316 init1: 200 opt: 295 Z-score: 278.7 bits: 61.0 E(85289): 8.7e-09
Smith-Waterman score: 295; 31.4% identity (65.4% similar) in 156 aa overlap (6-153:3-153)
10 20 30 40 50
pF1KSD MSSSVEQKKGPTRQRKCGFCKSNRD--KECGQLLISENQKVAAHHKCMLFSSALVSSHSD
:.: : ... : ::... : .. :. .:. ....:. :.:.::.. . ..
XP_011 MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKE
10 20 30 40 50
60 70 80 90 100 110
pF1KSD NESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREK
.:.. :: :::..::..:..:: : .:. ::.::: . :.:.::. :.:. ::
XP_011 EEGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-----REC
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD PSQ--GIYMVYCRKHKK----TAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNF
: : . .: :. :..: . .: .. . .::
XP_011 IFQFTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD KGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFN
XP_011 DCLQVQAINAGVFFFRCTICNNSDIFQKEMLRMGIHIPENKWEIKRCQCCGSSGTHLACS
180 190 200 210 220 230
>>XP_011535227 (OMIM: 611299) PREDICTED: G2/M phase-spec (706 aa)
initn: 265 init1: 237 opt: 295 Z-score: 278.4 bits: 61.1 E(85289): 9.1e-09
Smith-Waterman score: 295; 31.4% identity (65.4% similar) in 156 aa overlap (6-153:3-153)
10 20 30 40 50
pF1KSD MSSSVEQKKGPTRQRKCGFCKSNRD--KECGQLLISENQKVAAHHKCMLFSSALVSSHSD
:.: : ... : ::... : .. :. .:. ....:. :.:.::.. . ..
XP_011 MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKE
10 20 30 40 50
60 70 80 90 100 110
pF1KSD NESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREK
.:.. :: :::..::..:..:: : .:. ::.::: . :.:.::. :.:. ::
XP_011 EEGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-----REC
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD PSQ--GIYMVYCRKHKK----TAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNF
: : . .: :. :..: . .: .. . .::
XP_011 IFQFTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD KGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFN
XP_011 DCLQVQAINAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEENAYQELLQHYER
180 190 200 210 220 230
>>NP_060239 (OMIM: 611299) G2/M phase-specific E3 ubiqui (706 aa)
initn: 265 init1: 237 opt: 295 Z-score: 278.4 bits: 61.1 E(85289): 9.1e-09
Smith-Waterman score: 295; 31.4% identity (65.4% similar) in 156 aa overlap (6-153:3-153)
10 20 30 40 50
pF1KSD MSSSVEQKKGPTRQRKCGFCKSNRD--KECGQLLISENQKVAAHHKCMLFSSALVSSHSD
:.: : ... : ::... : .. :. .:. ....:. :.:.::.. . ..
NP_060 MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKE
10 20 30 40 50
60 70 80 90 100 110
pF1KSD NESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREK
.:.. :: :::..::..:..:: : .:. ::.::: . :.:.::. :.:. ::
NP_060 EEGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-----REC
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD PSQ--GIYMVYCRKHKK----TAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNF
: : . .: :. :..: . .: .. . .::
NP_060 IFQFTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD KGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFN
NP_060 DCLQVQAINAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEENAYQELLQHYER
180 190 200 210 220 230
>>NP_001295026 (OMIM: 611299) G2/M phase-specific E3 ubi (660 aa)
initn: 228 init1: 200 opt: 214 Z-score: 204.4 bits: 47.3 E(85289): 0.00012
Smith-Waterman score: 214; 33.3% identity (64.0% similar) in 111 aa overlap (49-153:2-107)
20 30 40 50 60 70
pF1KSD FCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGT
::.. . ...:.. :: :::..::..:..
NP_001 MSSGIWQRGKEEEGVYGFLIEDIRKEVNRAS
10 20 30
80 90 100 110 120 130
pF1KSD KLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQ--GIYMVYCRKHKK---
:: : .:. ::.::: . :.:.::. :.:. :: : : . .: :.
NP_001 KLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-----RECIFQFTGNFASFCWDHRPVQI
40 50 60 70 80
140 150 160 170 180 190
pF1KSD -TAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMES
:..: . .: .. . .::
NP_001 ITSNNYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHRDCLQVQAINAGVFFFRCTIC
90 100 110 120 130 140
>>XP_006718902 (OMIM: 159555,605130) PREDICTED: histone- (3133 aa)
initn: 191 init1: 155 opt: 220 Z-score: 200.5 bits: 48.8 E(85289): 0.0002
Smith-Waterman score: 251; 27.5% identity (54.0% similar) in 200 aa overlap (136-329:964-1141)
110 120 130 140 150 160
pF1KSD HCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKG
:: :. : : .: : ::
XP_006 SVKKSRFWEPNKVSSNSGMLPNAVLPPSLDHNYAQWQEREENSHTEQP--PLMKKIIPAP
940 950 960 970 980 990
170 180 190 200 210
pF1KSD RPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDR--SPHRSSPS---DTRPKCGFCHV-GE
.: :: .: : : :. :.: ::. . : :.: .:..: . :.
XP_006 KP-----KGPGEPDSPTPLHPPTPPILSTDRSREDSPELNPPPGIEDNR-QCALCLTYGD
1000 1010 1020 1030 1040
220 230 240 250 260 270
pF1KSD EENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMK
. . :.: .. ... .: .: :.:. . : : ..:.: . . :::...
XP_006 DSANDAGRL-LYIGQNEWTHVNCALWSAEVF--------EDDDGSLKNVHMAVIRGKQLR
1050 1060 1070 1080 1090
280 290 300 310 320 330
pF1KSD CTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEED
: .:..::::.:: . .:...::. :. . .... :.::. :
XP_006 CEFCQKPGATVGCCLTSCTSNYHFMCSRAKNCVFLDDK-----KVYCQRHRDLIKGEVVP
1100 1110 1120 1130 1140 1150
340 350 360
pF1KSD EERESKSRGKVEIDQQQLTQQQLNGN
XP_006 ENGFEVFRRVFVDFEGISLRRKFLNGLEPENIHMMIGSMTIDCLGILNDLSDCEDKLFPI
1160 1170 1180 1190 1200 1210
365 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:26:49 2016 done: Thu Nov 3 07:26:50 2016
Total Scan time: 8.890 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]