Result of FASTA (omim) for
pF1KSDA1872
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1872, 371 aa
1>>>pF1KSDA1872 371 - 371 aa - 371 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8765+/-0.000321; mu= 13.8889+/- 0.020
mean_var=79.0580+/-15.916, 0's: 0 Z-trim(115.9): 50 B-trim: 1400 in 1/58
Lambda= 0.144245
statistics sampled from 26536 (26592) to 26536 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.685), E-opt: 0.2 (0.312), width: 16
Scan time: 8.720
The best scores are: opt bits E(85289)
NP_149053 (OMIM: 601238,608179) caytaxin [Homo sap ( 371) 2476 524.7 1.3e-148
XP_006717047 (OMIM: 610691) PREDICTED: protein pru (3101) 1252 270.5 3.7e-71
XP_006717045 (OMIM: 610691) PREDICTED: protein pru (3104) 1250 270.1 5e-71
XP_011516628 (OMIM: 610691) PREDICTED: protein pru (3085) 1247 269.4 7.7e-71
XP_005251808 (OMIM: 610691) PREDICTED: protein pru (3075) 1246 269.2 8.8e-71
XP_011516630 (OMIM: 610691) PREDICTED: protein pru (3072) 1245 269.0 1e-70
XP_005251803 (OMIM: 610691) PREDICTED: protein pru (3091) 1245 269.0 1e-70
XP_005251802 (OMIM: 610691) PREDICTED: protein pru (3092) 1235 266.9 4.3e-70
NP_001294977 (OMIM: 610691) protein prune homolog (3063) 1215 262.8 7.7e-69
XP_016869842 (OMIM: 610691) PREDICTED: protein pru (3068) 1215 262.8 7.7e-69
XP_011516629 (OMIM: 610691) PREDICTED: protein pru (3079) 1215 262.8 7.7e-69
XP_016869843 (OMIM: 610691) PREDICTED: protein pru ( 365) 1019 221.5 2.4e-57
XP_016869848 (OMIM: 610691) PREDICTED: protein pru ( 336) 1015 220.7 4e-57
XP_006717049 (OMIM: 610691) PREDICTED: protein pru (3100) 1027 223.6 4.6e-57
XP_016869845 (OMIM: 610691) PREDICTED: protein pru ( 352) 1014 220.5 4.8e-57
XP_016869847 (OMIM: 610691) PREDICTED: protein pru ( 337) 1012 220.0 6.2e-57
NP_001294978 (OMIM: 610691) protein prune homolog ( 337) 1012 220.0 6.2e-57
NP_001294979 (OMIM: 610691) protein prune homolog ( 352) 1012 220.0 6.4e-57
XP_016869841 (OMIM: 610691) PREDICTED: protein pru (3071) 1023 222.8 8.2e-57
XP_016869835 (OMIM: 610691) PREDICTED: protein pru (3087) 1022 222.6 9.5e-57
NP_001307603 (OMIM: 603292) BCL2/adenovirus E1B 19 ( 447) 1008 219.3 1.4e-56
XP_006717048 (OMIM: 610691) PREDICTED: protein pru (3101) 1019 222.0 1.5e-56
NP_001317609 (OMIM: 610691) protein prune homolog ( 353) 1004 218.4 2e-56
XP_016869840 (OMIM: 610691) PREDICTED: protein pru (3072) 1015 221.1 2.6e-56
XP_005251807 (OMIM: 610691) PREDICTED: protein pru (3088) 1014 220.9 3e-56
NP_056040 (OMIM: 610691) protein prune homolog 2 i (3088) 1012 220.5 4e-56
XP_006717046 (OMIM: 610691) PREDICTED: protein pru (3103) 1011 220.3 4.7e-56
XP_016869839 (OMIM: 610691) PREDICTED: protein pru (3074) 1007 219.5 8.3e-56
XP_005251805 (OMIM: 610691) PREDICTED: protein pru (3090) 1006 219.3 9.6e-56
XP_011516625 (OMIM: 610691) PREDICTED: protein pru (3089) 1004 218.9 1.3e-55
NP_001294980 (OMIM: 610691) protein prune homolog ( 324) 984 214.2 3.4e-55
XP_016869846 (OMIM: 610691) PREDICTED: protein pru ( 340) 984 214.2 3.5e-55
XP_016869834 (OMIM: 610691) PREDICTED: protein pru (3091) 996 217.2 4.1e-55
XP_016869838 (OMIM: 610691) PREDICTED: protein pru (3075) 992 216.4 7.2e-55
NP_001307604 (OMIM: 603292) BCL2/adenovirus E1B 19 ( 376) 974 212.2 1.6e-54
NP_004321 (OMIM: 603292) BCL2/adenovirus E1B 19 kD ( 435) 974 212.2 1.8e-54
XP_005251811 (OMIM: 610691) PREDICTED: protein pru (3060) 984 214.7 2.3e-54
XP_016869837 (OMIM: 610691) PREDICTED: protein pru (3076) 984 214.7 2.3e-54
NP_612122 (OMIM: 611275) bcl-2/adenovirus E1B 19 k ( 357) 969 211.1 3.2e-54
NP_001294976 (OMIM: 610691) protein prune homolog (3062) 976 213.0 7.2e-54
XP_016869836 (OMIM: 610691) PREDICTED: protein pru (3078) 976 213.0 7.2e-54
NP_001153114 (OMIM: 611275) bcl-2/adenovirus E1B 1 ( 275) 845 185.2 1.5e-46
XP_011507538 (OMIM: 611275) PREDICTED: bcl-2/adeno ( 343) 811 178.2 2.4e-44
XP_016855909 (OMIM: 611275) PREDICTED: bcl-2/adeno ( 191) 696 154.2 2.4e-37
NP_001185655 (OMIM: 609405) rho GTPase-activating ( 305) 348 81.8 2.2e-15
XP_011518397 (OMIM: 602732) PREDICTED: rho GTPase- ( 439) 349 82.1 2.6e-15
NP_004299 (OMIM: 602732) rho GTPase-activating pro ( 439) 349 82.1 2.6e-15
NP_851852 (OMIM: 609405) rho GTPase-activating pro ( 433) 348 81.9 3e-15
XP_016873209 (OMIM: 602732) PREDICTED: rho GTPase- ( 395) 211 53.4 1.1e-06
NP_001017526 (OMIM: 609405) rho GTPase-activating ( 464) 201 51.3 5.2e-06
>>NP_149053 (OMIM: 601238,608179) caytaxin [Homo sapiens (371 aa)
initn: 2476 init1: 2476 opt: 2476 Z-score: 2789.1 bits: 524.7 E(85289): 1.3e-148
Smith-Waterman score: 2476; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)
10 20 30 40 50 60
pF1KSD MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTLNFNGAHRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTLNFNGAHRKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD KTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLGNGNELEWED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 KTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLGNGNELEWED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD DTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMIRPYMKVVTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 DTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMIRPYMKVVTH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GGYYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAEDYMIVYLNGATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 GGYYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAEDYMIVYLNGATP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFISVKFINKIQYVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 RRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFISVKFINKIQYVH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEEKPEVAPVENRSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 SLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEEKPEVAPVENRSA
310 320 330 340 350 360
370
pF1KSD LVSEDQETSMS
:::::::::::
NP_149 LVSEDQETSMS
370
>>XP_006717047 (OMIM: 610691) PREDICTED: protein prune h (3101 aa)
initn: 1105 init1: 818 opt: 1252 Z-score: 1398.4 bits: 270.5 E(85289): 3.7e-71
Smith-Waterman score: 1276; 57.6% identity (79.7% similar) in 349 aa overlap (22-367:2763-3095)
10 20 30 40 50
pF1KSD MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTL
::. .: : :: : : .. :::.:
XP_006 KNMIPDTEMEEETEFLELGTRISRPNGLLSEDVGMDIPFEEGV-LSPSAADMRPEPPNSL
2740 2750 2760 2770 2780 2790
60 70 80 90 100 110
pF1KSD NFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLG
..: .: .: :.::.::.::::::::.:::: ::.::..:::::...::::.::.:. :
XP_006 DLNDTHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTG
2800 2810 2820 2830 2840 2850
120 130 140 150 160 170
pF1KSD NGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMI
. :: : ::.. :. .. . . :.:. : ::::::.:::::.:::...:
XP_006 H------ED--P--TANKDSGQESESIPEYTAEEEREDN-RLWRTVVIGEQEQRIDMKVI
2860 2870 2880 2890 2900
180 190 200 210 220
pF1KSD RPYMKVVTHGG---YYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAE
.:: .:..::: :::.::::::::::::::::: ::::.::::::::::.:::.:::
XP_006 EPYRRVISHGGDSGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
2910 2920 2930 2940 2950 2960
230 240 250 260 270 280
pF1KSD DYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFI
::::::::::::::::::.::.:::::::::::::::::.:::::::::::.::..::::
XP_006 DYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
2970 2980 2990 3000 3010 3020
290 300 310 320 330 340
pF1KSD SVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEE
: :: .::.::.:: .: ::::. ..::. ...:.::: . ..:.: . : : .. :
XP_006 SSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKYDEER--SYKRSVRLDEE--LREASE
3030 3040 3050 3060 3070
350 360 370
pF1KSD KPEVAPVENRSALVSEDQETSMS
... . : . : ..:
XP_006 AAKTSCLYNDPEMSSMEKEKLCCVH
3080 3090 3100
>>XP_006717045 (OMIM: 610691) PREDICTED: protein prune h (3104 aa)
initn: 1105 init1: 818 opt: 1250 Z-score: 1396.2 bits: 270.1 E(85289): 5e-71
Smith-Waterman score: 1274; 57.4% identity (79.0% similar) in 352 aa overlap (22-370:2763-3092)
10 20 30 40 50
pF1KSD MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTL
::. .: : :: : : .. :::.:
XP_006 KNMIPDTEMEEETEFLELGTRISRPNGLLSEDVGMDIPFEEGV-LSPSAADMRPEPPNSL
2740 2750 2760 2770 2780 2790
60 70 80 90 100 110
pF1KSD NFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLG
..: .: .: :.::.::.::::::::.:::: ::.::..:::::...::::.::.:. :
XP_006 DLNDTHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTG
2800 2810 2820 2830 2840 2850
120 130 140 150 160 170
pF1KSD NGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMI
. :: : ::.. :. .. . . :.:. : ::::::.:::::.:::...:
XP_006 H------ED--P--TANKDSGQESESIPEYTAEEEREDN-RLWRTVVIGEQEQRIDMKVI
2860 2870 2880 2890 2900
180 190 200 210 220
pF1KSD RPYMKVVTHGG---YYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAE
.:: .:..::: :::.::::::::::::::::: ::::.::::::::::.:::.:::
XP_006 EPYRRVISHGGDSGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
2910 2920 2930 2940 2950 2960
230 240 250 260 270 280
pF1KSD DYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFI
::::::::::::::::::.::.:::::::::::::::::.:::::::::::.::..::::
XP_006 DYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
2970 2980 2990 3000 3010 3020
290 300 310 320 330 340
pF1KSD SVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEE
: :: .::.::.:: .: ::::. ..::. ...:.::: . ..:.: .::
XP_006 SSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKYDEER--SYKRSVR--------LDEE
3030 3040 3050 3060 3070
350 360 370
pF1KSD KPEVAPVENRSALVSEDQETSMS
:.. . . : : .. . .::
XP_006 LREASEAAKTSCLYNDPEMSSMEKDIDLKLKEKP
3080 3090 3100
>>XP_011516628 (OMIM: 610691) PREDICTED: protein prune h (3085 aa)
initn: 1105 init1: 818 opt: 1247 Z-score: 1392.8 bits: 269.4 E(85289): 7.7e-71
Smith-Waterman score: 1271; 60.7% identity (82.0% similar) in 323 aa overlap (22-341:2763-3071)
10 20 30 40 50
pF1KSD MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTL
::. .: : :: : : .. :::.:
XP_011 KNMIPDTEMEEETEFLELGTRISRPNGLLSEDVGMDIPFEEGV-LSPSAADMRPEPPNSL
2740 2750 2760 2770 2780 2790
60 70 80 90 100 110
pF1KSD NFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLG
..: .: .: :.::.::.::::::::.:::: ::.::..:::::...::::.::.:. :
XP_011 DLNDTHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTG
2800 2810 2820 2830 2840 2850
120 130 140 150 160 170
pF1KSD NGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMI
. :: : ::.. :. .. . . :.:. : ::::::.:::::.:::...:
XP_011 H------ED--P--TANKDSGQESESIPEYTAEEEREDN-RLWRTVVIGEQEQRIDMKVI
2860 2870 2880 2890 2900
180 190 200 210 220
pF1KSD RPYMKVVTHGG---YYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAE
.:: .:..::: :::.::::::::::::::::: ::::.::::::::::.:::.:::
XP_011 EPYRRVISHGGDSGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
2910 2920 2930 2940 2950 2960
230 240 250 260 270 280
pF1KSD DYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFI
::::::::::::::::::.::.:::::::::::::::::.:::::::::::.::..::::
XP_011 DYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
2970 2980 2990 3000 3010 3020
290 300 310 320 330 340
pF1KSD SVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEE
: :: .::.::.:: .: ::::. ..::. ...:.::: . ..:.: . :.
XP_011 SSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKYDEER--SYKRSVRLDEELREASEAA
3030 3040 3050 3060 3070
350 360 370
pF1KSD KPEVAPVENRSALVSEDQETSMS
XP_011 KKLCCVH
3080
>>XP_005251808 (OMIM: 610691) PREDICTED: protein prune h (3075 aa)
initn: 1142 init1: 818 opt: 1246 Z-score: 1391.7 bits: 269.2 E(85289): 8.8e-71
Smith-Waterman score: 1270; 61.7% identity (81.6% similar) in 316 aa overlap (22-334:2763-3066)
10 20 30 40 50
pF1KSD MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTL
::. .: : :: : : .. :::.:
XP_005 KNMIPDTEMEEETEFLELGTRISRPNGLLSEDVGMDIPFEEGV-LSPSAADMRPEPPNSL
2740 2750 2760 2770 2780 2790
60 70 80 90 100 110
pF1KSD NFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLG
..: .: .: :.::.::.::::::::.:::: ::.::..:::::...::::.::.:. :
XP_005 DLNDTHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTG
2800 2810 2820 2830 2840 2850
120 130 140 150 160 170
pF1KSD NGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMI
. :: : ::.. :. .. . . :.:. : ::::::.:::::.:::...:
XP_005 H------ED--P--TANKDSGQESESIPEYTAEEEREDN-RLWRTVVIGEQEQRIDMKVI
2860 2870 2880 2890 2900
180 190 200 210 220
pF1KSD RPYMKVVTHGG---YYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAE
.:: .:..::: :::.::::::::::::::::: ::::.::::::::::.:::.:::
XP_005 EPYRRVISHGGDSGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
2910 2920 2930 2940 2950 2960
230 240 250 260 270 280
pF1KSD DYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFI
::::::::::::::::::.::.:::::::::::::::::.:::::::::::.::..::::
XP_005 DYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
2970 2980 2990 3000 3010 3020
290 300 310 320 330 340
pF1KSD SVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEE
: :: .::.::.:: .: ::::. ..::. ...:.::: : :
XP_005 SSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKYDEERSYKRSVSIDLKLKEKP
3030 3040 3050 3060 3070
350 360 370
pF1KSD KPEVAPVENRSALVSEDQETSMS
>>XP_011516630 (OMIM: 610691) PREDICTED: protein prune h (3072 aa)
initn: 1142 init1: 818 opt: 1245 Z-score: 1390.6 bits: 269.0 E(85289): 1e-70
Smith-Waterman score: 1269; 62.0% identity (82.1% similar) in 313 aa overlap (22-331:2763-3063)
10 20 30 40 50
pF1KSD MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTL
::. .: : :: : : .. :::.:
XP_011 KNMIPDTEMEEETEFLELGTRISRPNGLLSEDVGMDIPFEEGV-LSPSAADMRPEPPNSL
2740 2750 2760 2770 2780 2790
60 70 80 90 100 110
pF1KSD NFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLG
..: .: .: :.::.::.::::::::.:::: ::.::..:::::...::::.::.:. :
XP_011 DLNDTHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTG
2800 2810 2820 2830 2840 2850
120 130 140 150 160 170
pF1KSD NGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMI
. :: : ::.. :. .. . . :.:. : ::::::.:::::.:::...:
XP_011 H------ED--P--TANKDSGQESESIPEYTAEEEREDN-RLWRTVVIGEQEQRIDMKVI
2860 2870 2880 2890 2900
180 190 200 210 220
pF1KSD RPYMKVVTHGG---YYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAE
.:: .:..::: :::.::::::::::::::::: ::::.::::::::::.:::.:::
XP_011 EPYRRVISHGGDSGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
2910 2920 2930 2940 2950 2960
230 240 250 260 270 280
pF1KSD DYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFI
::::::::::::::::::.::.:::::::::::::::::.:::::::::::.::..::::
XP_011 DYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
2970 2980 2990 3000 3010 3020
290 300 310 320 330 340
pF1KSD SVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEE
: :: .::.::.:: .: ::::. ..::. ...:.::: :
XP_011 SSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKYDEERSYKRSVRKLCCVH
3030 3040 3050 3060 3070
350 360 370
pF1KSD KPEVAPVENRSALVSEDQETSMS
>>XP_005251803 (OMIM: 610691) PREDICTED: protein prune h (3091 aa)
initn: 1143 init1: 819 opt: 1245 Z-score: 1390.6 bits: 269.0 E(85289): 1e-70
Smith-Waterman score: 1269; 62.0% identity (82.1% similar) in 313 aa overlap (22-331:2763-3063)
10 20 30 40 50
pF1KSD MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTL
::. .: : :: : : .. :::.:
XP_005 KNMIPDTEMEEETEFLELGTRISRPNGLLSEDVGMDIPFEEGV-LSPSAADMRPEPPNSL
2740 2750 2760 2770 2780 2790
60 70 80 90 100 110
pF1KSD NFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLG
..: .: .: :.::.::.::::::::.:::: ::.::..:::::...::::.::.:. :
XP_005 DLNDTHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTG
2800 2810 2820 2830 2840 2850
120 130 140 150 160 170
pF1KSD NGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMI
. :: : ::.. :. .. . . :.:. : ::::::.:::::.:::...:
XP_005 H------ED--P--TANKDSGQESESIPEYTAEEEREDN-RLWRTVVIGEQEQRIDMKVI
2860 2870 2880 2890 2900
180 190 200 210 220
pF1KSD RPYMKVVTHGG---YYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAE
.:: .:..::: :::.::::::::::::::::: ::::.::::::::::.:::.:::
XP_005 EPYRRVISHGGDSGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
2910 2920 2930 2940 2950 2960
230 240 250 260 270 280
pF1KSD DYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFI
::::::::::::::::::.::.:::::::::::::::::.:::::::::::.::..::::
XP_005 DYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
2970 2980 2990 3000 3010 3020
290 300 310 320 330 340
pF1KSD SVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEE
: :: .::.::.:: .: ::::. ..::. ...:.::: :
XP_005 SSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKYDEERSYKRSVRTSCLYNDPEMSSME
3030 3040 3050 3060 3070 3080
350 360 370
pF1KSD KPEVAPVENRSALVSEDQETSMS
XP_005 KDIDLKLKEKP
3090
>>XP_005251802 (OMIM: 610691) PREDICTED: protein prune h (3092 aa)
initn: 1126 init1: 802 opt: 1235 Z-score: 1379.3 bits: 266.9 E(85289): 4.3e-70
Smith-Waterman score: 1259; 61.0% identity (81.8% similar) in 318 aa overlap (22-336:2763-3067)
10 20 30 40 50
pF1KSD MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTL
::. .: : :: : : .. :::.:
XP_005 KNMIPDTEMEEETEFLELGTRISRPNGLLSEDVGMDIPFEEGV-LSPSAADMRPEPPNSL
2740 2750 2760 2770 2780 2790
60 70 80 90 100 110
pF1KSD NFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLG
..: .: .: :.::.::.::::::::.:::: ::.::..:::::...::::.::.:. :
XP_005 DLNDTHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTG
2800 2810 2820 2830 2840 2850
120 130 140 150 160 170
pF1KSD NGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMI
. :: : ::.. :. .. . . :.:. : ::::::.:::::.:::...:
XP_005 H------ED--P--TANKDSGQESESIPEYTAEEEREDN-RLWRTVVIGEQEQRIDMKVI
2860 2870 2880 2890 2900
180 190 200 210 220
pF1KSD RPYMKVVTHGG---YYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAE
.:: .:..::: :::.::::::::::::::::: ::::.::::::::::.:::.:::
XP_005 EPYRRVISHGGDSGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
2910 2920 2930 2940 2950 2960
230 240 250 260 270 280
pF1KSD DYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFI
::::::::::::::::::.::.:::::::::::::::::.:::::::::::.::..::::
XP_005 DYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
2970 2980 2990 3000 3010 3020
290 300 310 320 330 340
pF1KSD SVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEE
: :: .::.::.:: .: ::::. ..::. ... .:: :. :.:.
XP_005 SSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKLDEE-LREASEAAKTSCLYNDPEMSS
3030 3040 3050 3060 3070
350 360 370
pF1KSD KPEVAPVENRSALVSEDQETSMS
XP_005 MEKDIDLKLKEKP
3080 3090
>>NP_001294977 (OMIM: 610691) protein prune homolog 2 is (3063 aa)
initn: 1269 init1: 788 opt: 1215 Z-score: 1356.9 bits: 262.8 E(85289): 7.7e-69
Smith-Waterman score: 1239; 61.0% identity (81.8% similar) in 313 aa overlap (22-331:2763-3062)
10 20 30 40 50
pF1KSD MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTL
::. .: : :: : : .. :::.:
NP_001 KNMIPDTEMEEETEFLELGTRISRPNGLLSEDVGMDIPFEEGV-LSPSAADMRPEPPNSL
2740 2750 2760 2770 2780 2790
60 70 80 90 100 110
pF1KSD NFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLG
..: .: .: :.::.::.::::::::.:::: ::.::..:::::...::::.::.:. :
NP_001 DLNDTHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTG
2800 2810 2820 2830 2840 2850
120 130 140 150 160 170
pF1KSD NGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMI
. :: : ::.. :. .. . . :.:. : ::::::.:::::.:::...:
NP_001 H------ED--P--TANKDSGQESESIPEYTAEEEREDN-RLWRTVVIGEQEQRIDMKVI
2860 2870 2880 2890 2900
180 190 200 210 220
pF1KSD RPYMKVVTHGG---YYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAE
.:: .:..::: :::.::::::::::::::::: ::::.::::::::::.:::.:::
NP_001 EPYRRVISHGGDSGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
2910 2920 2930 2940 2950 2960
230 240 250 260 270 280
pF1KSD DYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFI
::::::::::::::::::.::.:::::::::::::::::.:::::::::::.::..::::
NP_001 DYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
2970 2980 2990 3000 3010 3020
290 300 310 320 330 340
pF1KSD SVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEE
: :: .::.::.:: .: ::::. ..::. ... . .:: .
NP_001 SSKFSSKIKYVNSLSELSGLIPMDCIHIPESIINIDL-KLKEKP
3030 3040 3050 3060
350 360 370
pF1KSD KPEVAPVENRSALVSEDQETSMS
>>XP_016869842 (OMIM: 610691) PREDICTED: protein prune h (3068 aa)
initn: 1267 init1: 789 opt: 1215 Z-score: 1356.9 bits: 262.8 E(85289): 7.7e-69
Smith-Waterman score: 1239; 62.2% identity (82.6% similar) in 304 aa overlap (22-322:2763-3054)
10 20 30 40 50
pF1KSD MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTL
::. .: : :: : : .. :::.:
XP_016 KNMIPDTEMEEETEFLELGTRISRPNGLLSEDVGMDIPFEEGV-LSPSAADMRPEPPNSL
2740 2750 2760 2770 2780 2790
60 70 80 90 100 110
pF1KSD NFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLG
..: .: .: :.::.::.::::::::.:::: ::.::..:::::...::::.::.:. :
XP_016 DLNDTHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTG
2800 2810 2820 2830 2840 2850
120 130 140 150 160 170
pF1KSD NGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMI
. :: : ::.. :. .. . . :.:. : ::::::.:::::.:::...:
XP_016 H------ED--P--TANKDSGQESESIPEYTAEEEREDN-RLWRTVVIGEQEQRIDMKVI
2860 2870 2880 2890 2900
180 190 200 210 220
pF1KSD RPYMKVVTHGG---YYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAE
.:: .:..::: :::.::::::::::::::::: ::::.::::::::::.:::.:::
XP_016 EPYRRVISHGGDSGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
2910 2920 2930 2940 2950 2960
230 240 250 260 270 280
pF1KSD DYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFI
::::::::::::::::::.::.:::::::::::::::::.:::::::::::.::..::::
XP_016 DYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
2970 2980 2990 3000 3010 3020
290 300 310 320 330 340
pF1KSD SVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEE
: :: .::.::.:: .: ::::. ..::. ...
XP_016 SSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKCRGRNLVGSYLCTV
3030 3040 3050 3060
350 360 370
pF1KSD KPEVAPVENRSALVSEDQETSMS
371 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:34:08 2016 done: Thu Nov 3 07:34:09 2016
Total Scan time: 8.720 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]