Result of FASTA (omim) for
pF1KSDA1882
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1882, 1148 aa
1>>>pF1KSDA1882 1148 - 1148 aa - 1148 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7197+/-0.000401; mu= 20.2080+/- 0.025
mean_var=77.0101+/-15.473, 0's: 0 Z-trim(111.6): 15 B-trim: 0 in 0/55
Lambda= 0.146151
statistics sampled from 20182 (20190) to 20182 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.237), width: 16
Scan time: 16.060
The best scores are: opt bits E(85289)
NP_001153844 (OMIM: 611966,613192) trafficking pro (1148) 7665 1626.7 0
NP_113654 (OMIM: 611966,613192) trafficking protei (1246) 7665 1626.7 0
XP_011515630 (OMIM: 611966,613192) PREDICTED: traf (1128) 6762 1436.3 0
XP_016869382 (OMIM: 611966,613192) PREDICTED: traf ( 989) 5667 1205.3 0
NP_001308575 (OMIM: 611966,613192) trafficking pro (1139) 5652 1202.2 0
XP_011515628 (OMIM: 611966,613192) PREDICTED: traf (1237) 5652 1202.2 0
XP_016869383 (OMIM: 611966,613192) PREDICTED: traf ( 688) 4567 973.3 0
XP_011515632 (OMIM: 611966,613192) PREDICTED: traf ( 631) 4197 895.3 0
>>NP_001153844 (OMIM: 611966,613192) trafficking protein (1148 aa)
initn: 7665 init1: 7665 opt: 7665 Z-score: 8726.8 bits: 1626.7 E(85289): 0
Smith-Waterman score: 7665; 100.0% identity (100.0% similar) in 1148 aa overlap (1-1148:1-1148)
10 20 30 40 50 60
pF1KSD MSVPDYMQCAEDHQTLLVVVQPVGIVSEENFFRIYKRICSVSQISVRDSQRVLYIRYRHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSVPDYMQCAEDHQTLLVVVQPVGIVSEENFFRIYKRICSVSQISVRDSQRVLYIRYRHH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD YPPENNEWGDFQTHRKVVGLITITDCFSAKDWPQTFEKFHVQKEIYGSTLYDSRLFVFGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YPPENNEWGDFQTHRKVVGLITITDCFSAKDWPQTFEKFHVQKEIYGSTLYDSRLFVFGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QGEIVEQPRTDVAFYPNYEDCQTVEKRIEDFIESLFIVLESKRLDRATDKSGDKIPLLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGEIVEQPRTDVAFYPNYEDCQTVEKRIEDFIESLFIVLESKRLDRATDKSGDKIPLLCV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD PFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDSLVHYHMSVELLRSVNDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDSLVHYHMSVELLRSVNDFL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD WLGAALEGLCSASVIYHYPGGTGGKSGARRFQGSTLPAEAANRHRPGAQEVLIDPGALTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WLGAALEGLCSASVIYHYPGGTGGKSGARRFQGSTLPAEAANRHRPGAQEVLIDPGALTT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NGINPDTSTEIGRAKNCLSPEDIIDKYKEAISYYSKYKNAGVIELEACIKAVRVLAIQKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGINPDTSTEIGRAKNCLSPEDIIDKYKEAISYYSKYKNAGVIELEACIKAVRVLAIQKR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD SMEASEFLQNAVYINLRQLSEEEKIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SMEASEFLQNAVYINLRQLSEEEKIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPSI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD AEPGWRACYKLLLETLPGYSLSLDPKDFSRGTHRGWAAVQMRLLHELVYASRRMGNPALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEPGWRACYKLLLETLPGYSLSLDPKDFSRGTHRGWAAVQMRLLHELVYASRRMGNPALS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VRHLSFLLQTMLDFLSDQEKKDVAQSLENYTSKCPGTMEPIALPGGLTLPPVPFTKLPIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VRHLSFLLQTMLDFLSDQEKKDVAQSLENYTSKCPGTMEPIALPGGLTLPPVPFTKLPIV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD RHVKLLNLPASLRPHKMKSLLGQNVSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHVKLLNLPASLRPHKMKSLLGQNVSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD VQLMVYNPMPFELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQLMVYNPMPFELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVN
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD GYHTTVFGVFSDCLLDNLPGIKTSGSTVEVIPALPRLQISTSLPRSAHSLQPSSGDEIST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYHTTVFGVFSDCLLDNLPGIKTSGSTVEVIPALPRLQISTSLPRSAHSLQPSSGDEIST
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD NVSVQLYNGESQQLIIKLENIGMEPLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVSVQLYNGESQQLIIKLENIGMEPLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD QPGKVATFTINIKVKLDFSCQENLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPGKVATFTINIKVKLDFSCQENLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD ESNKAGDYSHVKTLEAVLNFKYSGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESNKAGDYSHVKTLEAVLNFKYSGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATS
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD TRQCHLLLDVFNSTEHELTVSTRSSEALILHAGECQRMAIQVDKFNFESFPESPGEKGQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRQCHLLLDVFNSTEHELTVSTRSSEALILHAGECQRMAIQVDKFNFESFPESPGEKGQF
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD ANPKQLEEERREARGLEIHSKLGICWRIPSLKRSGEASVEGLLNQLVLEHLQLAPLQWDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANPKQLEEERREARGLEIHSKLGICWRIPSLKRSGEASVEGLLNQLVLEHLQLAPLQWDV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD LVDGQPCDREAVAACQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVDGQPCDREAVAACQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDT
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD VSFVGSSTFYLDAVQPSGQSACLGALLFLYTGDFFLHIRFHEDSTSKELPPSWFCLPSVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSFVGSSTFYLDAVQPSGQSACLGALLFLYTGDFFLHIRFHEDSTSKELPPSWFCLPSVH
1090 1100 1110 1120 1130 1140
pF1KSD VCALEAQA
::::::::
NP_001 VCALEAQA
>>NP_113654 (OMIM: 611966,613192) trafficking protein pa (1246 aa)
initn: 7665 init1: 7665 opt: 7665 Z-score: 8726.3 bits: 1626.7 E(85289): 0
Smith-Waterman score: 7665; 100.0% identity (100.0% similar) in 1148 aa overlap (1-1148:99-1246)
10 20 30
pF1KSD MSVPDYMQCAEDHQTLLVVVQPVGIVSEEN
::::::::::::::::::::::::::::::
NP_113 PQWASAGPPPLSFTEEVKFELRALKDWDFKMSVPDYMQCAEDHQTLLVVVQPVGIVSEEN
70 80 90 100 110 120
40 50 60 70 80 90
pF1KSD FFRIYKRICSVSQISVRDSQRVLYIRYRHHYPPENNEWGDFQTHRKVVGLITITDCFSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 FFRIYKRICSVSQISVRDSQRVLYIRYRHHYPPENNEWGDFQTHRKVVGLITITDCFSAK
130 140 150 160 170 180
100 110 120 130 140 150
pF1KSD DWPQTFEKFHVQKEIYGSTLYDSRLFVFGLQGEIVEQPRTDVAFYPNYEDCQTVEKRIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 DWPQTFEKFHVQKEIYGSTLYDSRLFVFGLQGEIVEQPRTDVAFYPNYEDCQTVEKRIED
190 200 210 220 230 240
160 170 180 190 200 210
pF1KSD FIESLFIVLESKRLDRATDKSGDKIPLLCVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 FIESLFIVLESKRLDRATDKSGDKIPLLCVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVG
250 260 270 280 290 300
220 230 240 250 260 270
pF1KSD DLCLQAGMLQDSLVHYHMSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGTGGKSGARR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 DLCLQAGMLQDSLVHYHMSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGTGGKSGARR
310 320 330 340 350 360
280 290 300 310 320 330
pF1KSD FQGSTLPAEAANRHRPGAQEVLIDPGALTTNGINPDTSTEIGRAKNCLSPEDIIDKYKEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 FQGSTLPAEAANRHRPGAQEVLIDPGALTTNGINPDTSTEIGRAKNCLSPEDIIDKYKEA
370 380 390 400 410 420
340 350 360 370 380 390
pF1KSD ISYYSKYKNAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLRQLSEEEKIQRYSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 ISYYSKYKNAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLRQLSEEEKIQRYSI
430 440 450 460 470 480
400 410 420 430 440 450
pF1KSD LSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLSLDPKDFSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 LSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLSLDPKDFSR
490 500 510 520 530 540
460 470 480 490 500 510
pF1KSD GTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKDVAQSLENY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 GTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKDVAQSLENY
550 560 570 580 590 600
520 530 540 550 560 570
pF1KSD TSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLGQNVSTKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 TSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLGQNVSTKSP
610 620 630 640 650 660
580 590 600 610 620 630
pF1KSD FIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLTSGVEFESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 FIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLTSGVEFESL
670 680 690 700 710 720
640 650 660 670 680 690
pF1KSD PAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIKTSGSTVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 PAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIKTSGSTVEV
730 740 750 760 770 780
700 710 720 730 740 750
pF1KSD IPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIGMEPLEKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 IPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIGMEPLEKLE
790 800 810 820 830 840
760 770 780 790 800 810
pF1KSD VTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQENLLQDLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 VTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQENLLQDLSD
850 860 870 880 890 900
820 830 840 850 860 870
pF1KSD DGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNFKYSGGPGHTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 DGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNFKYSGGPGHTE
910 920 930 940 950 960
880 890 900 910 920 930
pF1KSD GYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDVFNSTEHELTVSTRSSEALIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 GYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDVFNSTEHELTVSTRSSEALIL
970 980 990 1000 1010 1020
940 950 960 970 980 990
pF1KSD HAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEERREARGLEIHSKLGICWRIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 HAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEERREARGLEIHSKLGICWRIPS
1030 1040 1050 1060 1070 1080
1000 1010 1020 1030 1040 1050
pF1KSD LKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPCDREAVAACQVGDPVRLEVRLTNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 LKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPCDREAVAACQVGDPVRLEVRLTNR
1090 1100 1110 1120 1130 1140
1060 1070 1080 1090 1100 1110
pF1KSD SPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSSTFYLDAVQPSGQSACLGALLFLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 SPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSSTFYLDAVQPSGQSACLGALLFLY
1150 1160 1170 1180 1190 1200
1120 1130 1140
pF1KSD TGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQA
::::::::::::::::::::::::::::::::::::::
NP_113 TGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQA
1210 1220 1230 1240
>>XP_011515630 (OMIM: 611966,613192) PREDICTED: traffick (1128 aa)
initn: 6762 init1: 6762 opt: 6762 Z-score: 7697.9 bits: 1436.3 E(85289): 0
Smith-Waterman score: 6762; 100.0% identity (100.0% similar) in 1018 aa overlap (1-1018:99-1116)
10 20 30
pF1KSD MSVPDYMQCAEDHQTLLVVVQPVGIVSEEN
::::::::::::::::::::::::::::::
XP_011 PQWASAGPPPLSFTEEVKFELRALKDWDFKMSVPDYMQCAEDHQTLLVVVQPVGIVSEEN
70 80 90 100 110 120
40 50 60 70 80 90
pF1KSD FFRIYKRICSVSQISVRDSQRVLYIRYRHHYPPENNEWGDFQTHRKVVGLITITDCFSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFRIYKRICSVSQISVRDSQRVLYIRYRHHYPPENNEWGDFQTHRKVVGLITITDCFSAK
130 140 150 160 170 180
100 110 120 130 140 150
pF1KSD DWPQTFEKFHVQKEIYGSTLYDSRLFVFGLQGEIVEQPRTDVAFYPNYEDCQTVEKRIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWPQTFEKFHVQKEIYGSTLYDSRLFVFGLQGEIVEQPRTDVAFYPNYEDCQTVEKRIED
190 200 210 220 230 240
160 170 180 190 200 210
pF1KSD FIESLFIVLESKRLDRATDKSGDKIPLLCVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FIESLFIVLESKRLDRATDKSGDKIPLLCVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVG
250 260 270 280 290 300
220 230 240 250 260 270
pF1KSD DLCLQAGMLQDSLVHYHMSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGTGGKSGARR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLCLQAGMLQDSLVHYHMSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGTGGKSGARR
310 320 330 340 350 360
280 290 300 310 320 330
pF1KSD FQGSTLPAEAANRHRPGAQEVLIDPGALTTNGINPDTSTEIGRAKNCLSPEDIIDKYKEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FQGSTLPAEAANRHRPGAQEVLIDPGALTTNGINPDTSTEIGRAKNCLSPEDIIDKYKEA
370 380 390 400 410 420
340 350 360 370 380 390
pF1KSD ISYYSKYKNAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLRQLSEEEKIQRYSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ISYYSKYKNAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLRQLSEEEKIQRYSI
430 440 450 460 470 480
400 410 420 430 440 450
pF1KSD LSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLSLDPKDFSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLSLDPKDFSR
490 500 510 520 530 540
460 470 480 490 500 510
pF1KSD GTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKDVAQSLENY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKDVAQSLENY
550 560 570 580 590 600
520 530 540 550 560 570
pF1KSD TSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLGQNVSTKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLGQNVSTKSP
610 620 630 640 650 660
580 590 600 610 620 630
pF1KSD FIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLTSGVEFESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLTSGVEFESL
670 680 690 700 710 720
640 650 660 670 680 690
pF1KSD PAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIKTSGSTVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIKTSGSTVEV
730 740 750 760 770 780
700 710 720 730 740 750
pF1KSD IPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIGMEPLEKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIGMEPLEKLE
790 800 810 820 830 840
760 770 780 790 800 810
pF1KSD VTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQENLLQDLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQENLLQDLSD
850 860 870 880 890 900
820 830 840 850 860 870
pF1KSD DGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNFKYSGGPGHTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNFKYSGGPGHTE
910 920 930 940 950 960
880 890 900 910 920 930
pF1KSD GYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDVFNSTEHELTVSTRSSEALIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDVFNSTEHELTVSTRSSEALIL
970 980 990 1000 1010 1020
940 950 960 970 980 990
pF1KSD HAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEERREARGLEIHSKLGICWRIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEERREARGLEIHSKLGICWRIPS
1030 1040 1050 1060 1070 1080
1000 1010 1020 1030 1040 1050
pF1KSD LKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPCDREAVAACQVGDPVRLEVRLTNR
::::::::::::::::::::::::::::
XP_011 LKRSGEASVEGLLNQLVLEHLQLAPLQWGGQLSTPVTVQT
1090 1100 1110 1120
>>XP_016869382 (OMIM: 611966,613192) PREDICTED: traffick (989 aa)
initn: 5663 init1: 5663 opt: 5667 Z-score: 6451.0 bits: 1205.3 E(85289): 0
Smith-Waterman score: 5667; 99.2% identity (99.5% similar) in 861 aa overlap (1-861:99-959)
10 20 30
pF1KSD MSVPDYMQCAEDHQTLLVVVQPVGIVSEEN
::::::::::::::::::::::::::::::
XP_016 PQWASAGPPPLSFTEEVKFELRALKDWDFKMSVPDYMQCAEDHQTLLVVVQPVGIVSEEN
70 80 90 100 110 120
40 50 60 70 80 90
pF1KSD FFRIYKRICSVSQISVRDSQRVLYIRYRHHYPPENNEWGDFQTHRKVVGLITITDCFSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FFRIYKRICSVSQISVRDSQRVLYIRYRHHYPPENNEWGDFQTHRKVVGLITITDCFSAK
130 140 150 160 170 180
100 110 120 130 140 150
pF1KSD DWPQTFEKFHVQKEIYGSTLYDSRLFVFGLQGEIVEQPRTDVAFYPNYEDCQTVEKRIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DWPQTFEKFHVQKEIYGSTLYDSRLFVFGLQGEIVEQPRTDVAFYPNYEDCQTVEKRIED
190 200 210 220 230 240
160 170 180 190 200 210
pF1KSD FIESLFIVLESKRLDRATDKSGDKIPLLCVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FIESLFIVLESKRLDRATDKSGDKIPLLCVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVG
250 260 270 280 290 300
220 230 240 250 260 270
pF1KSD DLCLQAGMLQDSLVHYHMSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGTGGKSGARR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLCLQAGMLQDSLVHYHMSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGTGGKSGARR
310 320 330 340 350 360
280 290 300 310 320 330
pF1KSD FQGSTLPAEAANRHRPGAQEVLIDPGALTTNGINPDTSTEIGRAKNCLSPEDIIDKYKEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FQGSTLPAEAANRHRPGAQEVLIDPGALTTNGINPDTSTEIGRAKNCLSPEDIIDKYKEA
370 380 390 400 410 420
340 350 360 370 380 390
pF1KSD ISYYSKYKNAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLRQLSEEEKIQRYSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISYYSKYKNAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLRQLSEEEKIQRYSI
430 440 450 460 470 480
400 410 420 430 440 450
pF1KSD LSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLSLDPKDFSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLSLDPKDFSR
490 500 510 520 530 540
460 470 480 490 500 510
pF1KSD GTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKDVAQSLENY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKDVAQSLENY
550 560 570 580 590 600
520 530 540 550 560 570
pF1KSD TSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLGQNVSTKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLGQNVSTKSP
610 620 630 640 650 660
580 590 600 610 620 630
pF1KSD FIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLTSGVEFESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLTSGVEFESL
670 680 690 700 710 720
640 650 660 670 680 690
pF1KSD PAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIKTSGSTVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIKTSGSTVEV
730 740 750 760 770 780
700 710 720 730 740 750
pF1KSD IPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIGMEPLEKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIGMEPLEKLE
790 800 810 820 830 840
760 770 780 790 800 810
pF1KSD VTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQENLLQDLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQENLLQDLSD
850 860 870 880 890 900
820 830 840 850 860 870
pF1KSD DGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNFKYSGGPGHTE
:::::::::::::::::::::::::::::::::::::::::: : . ..:
XP_016 DGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKENENTDSLKDMTDAHSSF
910 920 930 940 950 960
880 890 900 910 920 930
pF1KSD GYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDVFNSTEHELTVSTRSSEALIL
XP_016 IHNSPKLETKCPGTDEWINTL
970 980
>>NP_001308575 (OMIM: 611966,613192) trafficking protein (1139 aa)
initn: 5652 init1: 5652 opt: 5652 Z-score: 6433.0 bits: 1202.2 E(85289): 0
Smith-Waterman score: 7578; 99.2% identity (99.2% similar) in 1148 aa overlap (1-1148:1-1139)
10 20 30 40 50 60
pF1KSD MSVPDYMQCAEDHQTLLVVVQPVGIVSEENFFRIYKRICSVSQISVRDSQRVLYIRYRHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSVPDYMQCAEDHQTLLVVVQPVGIVSEENFFRIYKRICSVSQISVRDSQRVLYIRYRHH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD YPPENNEWGDFQTHRKVVGLITITDCFSAKDWPQTFEKFHVQKEIYGSTLYDSRLFVFGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YPPENNEWGDFQTHRKVVGLITITDCFSAKDWPQTFEKFHVQKEIYGSTLYDSRLFVFGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QGEIVEQPRTDVAFYPNYEDCQTVEKRIEDFIESLFIVLESKRLDRATDKSGDKIPLLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGEIVEQPRTDVAFYPNYEDCQTVEKRIEDFIESLFIVLESKRLDRATDKSGDKIPLLCV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD PFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDSLVHYHMSVELLRSVNDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDSLVHYHMSVELLRSVNDFL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD WLGAALEGLCSASVIYHYPGGTGGKSGARRFQGSTLPAEAANRHRPGAQEVLIDPGALTT
:::::::::::::::::::::::::::::::::::::::::::::::: :::
NP_001 WLGAALEGLCSASVIYHYPGGTGGKSGARRFQGSTLPAEAANRHRPGA---------LTT
250 260 270 280 290
310 320 330 340 350 360
pF1KSD NGINPDTSTEIGRAKNCLSPEDIIDKYKEAISYYSKYKNAGVIELEACIKAVRVLAIQKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGINPDTSTEIGRAKNCLSPEDIIDKYKEAISYYSKYKNAGVIELEACIKAVRVLAIQKR
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD SMEASEFLQNAVYINLRQLSEEEKIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SMEASEFLQNAVYINLRQLSEEEKIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPSI
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD AEPGWRACYKLLLETLPGYSLSLDPKDFSRGTHRGWAAVQMRLLHELVYASRRMGNPALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEPGWRACYKLLLETLPGYSLSLDPKDFSRGTHRGWAAVQMRLLHELVYASRRMGNPALS
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD VRHLSFLLQTMLDFLSDQEKKDVAQSLENYTSKCPGTMEPIALPGGLTLPPVPFTKLPIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VRHLSFLLQTMLDFLSDQEKKDVAQSLENYTSKCPGTMEPIALPGGLTLPPVPFTKLPIV
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD RHVKLLNLPASLRPHKMKSLLGQNVSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHVKLLNLPASLRPHKMKSLLGQNVSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCE
540 550 560 570 580 590
610 620 630 640 650 660
pF1KSD VQLMVYNPMPFELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQLMVYNPMPFELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVN
600 610 620 630 640 650
670 680 690 700 710 720
pF1KSD GYHTTVFGVFSDCLLDNLPGIKTSGSTVEVIPALPRLQISTSLPRSAHSLQPSSGDEIST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYHTTVFGVFSDCLLDNLPGIKTSGSTVEVIPALPRLQISTSLPRSAHSLQPSSGDEIST
660 670 680 690 700 710
730 740 750 760 770 780
pF1KSD NVSVQLYNGESQQLIIKLENIGMEPLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVSVQLYNGESQQLIIKLENIGMEPLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPL
720 730 740 750 760 770
790 800 810 820 830 840
pF1KSD QPGKVATFTINIKVKLDFSCQENLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPGKVATFTINIKVKLDFSCQENLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPP
780 790 800 810 820 830
850 860 870 880 890 900
pF1KSD ESNKAGDYSHVKTLEAVLNFKYSGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESNKAGDYSHVKTLEAVLNFKYSGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATS
840 850 860 870 880 890
910 920 930 940 950 960
pF1KSD TRQCHLLLDVFNSTEHELTVSTRSSEALILHAGECQRMAIQVDKFNFESFPESPGEKGQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRQCHLLLDVFNSTEHELTVSTRSSEALILHAGECQRMAIQVDKFNFESFPESPGEKGQF
900 910 920 930 940 950
970 980 990 1000 1010 1020
pF1KSD ANPKQLEEERREARGLEIHSKLGICWRIPSLKRSGEASVEGLLNQLVLEHLQLAPLQWDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANPKQLEEERREARGLEIHSKLGICWRIPSLKRSGEASVEGLLNQLVLEHLQLAPLQWDV
960 970 980 990 1000 1010
1030 1040 1050 1060 1070 1080
pF1KSD LVDGQPCDREAVAACQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVDGQPCDREAVAACQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDT
1020 1030 1040 1050 1060 1070
1090 1100 1110 1120 1130 1140
pF1KSD VSFVGSSTFYLDAVQPSGQSACLGALLFLYTGDFFLHIRFHEDSTSKELPPSWFCLPSVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSFVGSSTFYLDAVQPSGQSACLGALLFLYTGDFFLHIRFHEDSTSKELPPSWFCLPSVH
1080 1090 1100 1110 1120 1130
pF1KSD VCALEAQA
::::::::
NP_001 VCALEAQA
>>XP_011515628 (OMIM: 611966,613192) PREDICTED: traffick (1237 aa)
initn: 5652 init1: 5652 opt: 5652 Z-score: 6432.4 bits: 1202.2 E(85289): 0
Smith-Waterman score: 7578; 99.2% identity (99.2% similar) in 1148 aa overlap (1-1148:99-1237)
10 20 30
pF1KSD MSVPDYMQCAEDHQTLLVVVQPVGIVSEEN
::::::::::::::::::::::::::::::
XP_011 PQWASAGPPPLSFTEEVKFELRALKDWDFKMSVPDYMQCAEDHQTLLVVVQPVGIVSEEN
70 80 90 100 110 120
40 50 60 70 80 90
pF1KSD FFRIYKRICSVSQISVRDSQRVLYIRYRHHYPPENNEWGDFQTHRKVVGLITITDCFSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFRIYKRICSVSQISVRDSQRVLYIRYRHHYPPENNEWGDFQTHRKVVGLITITDCFSAK
130 140 150 160 170 180
100 110 120 130 140 150
pF1KSD DWPQTFEKFHVQKEIYGSTLYDSRLFVFGLQGEIVEQPRTDVAFYPNYEDCQTVEKRIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWPQTFEKFHVQKEIYGSTLYDSRLFVFGLQGEIVEQPRTDVAFYPNYEDCQTVEKRIED
190 200 210 220 230 240
160 170 180 190 200 210
pF1KSD FIESLFIVLESKRLDRATDKSGDKIPLLCVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FIESLFIVLESKRLDRATDKSGDKIPLLCVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVG
250 260 270 280 290 300
220 230 240 250 260 270
pF1KSD DLCLQAGMLQDSLVHYHMSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGTGGKSGARR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLCLQAGMLQDSLVHYHMSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGTGGKSGARR
310 320 330 340 350 360
280 290 300 310 320 330
pF1KSD FQGSTLPAEAANRHRPGAQEVLIDPGALTTNGINPDTSTEIGRAKNCLSPEDIIDKYKEA
:::::::::::::::::: :::::::::::::::::::::::::::::::::
XP_011 FQGSTLPAEAANRHRPGA---------LTTNGINPDTSTEIGRAKNCLSPEDIIDKYKEA
370 380 390 400 410
340 350 360 370 380 390
pF1KSD ISYYSKYKNAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLRQLSEEEKIQRYSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ISYYSKYKNAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLRQLSEEEKIQRYSI
420 430 440 450 460 470
400 410 420 430 440 450
pF1KSD LSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLSLDPKDFSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLSLDPKDFSR
480 490 500 510 520 530
460 470 480 490 500 510
pF1KSD GTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKDVAQSLENY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKDVAQSLENY
540 550 560 570 580 590
520 530 540 550 560 570
pF1KSD TSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLGQNVSTKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLGQNVSTKSP
600 610 620 630 640 650
580 590 600 610 620 630
pF1KSD FIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLTSGVEFESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLTSGVEFESL
660 670 680 690 700 710
640 650 660 670 680 690
pF1KSD PAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIKTSGSTVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIKTSGSTVEV
720 730 740 750 760 770
700 710 720 730 740 750
pF1KSD IPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIGMEPLEKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIGMEPLEKLE
780 790 800 810 820 830
760 770 780 790 800 810
pF1KSD VTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQENLLQDLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQENLLQDLSD
840 850 860 870 880 890
820 830 840 850 860 870
pF1KSD DGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNFKYSGGPGHTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNFKYSGGPGHTE
900 910 920 930 940 950
880 890 900 910 920 930
pF1KSD GYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDVFNSTEHELTVSTRSSEALIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDVFNSTEHELTVSTRSSEALIL
960 970 980 990 1000 1010
940 950 960 970 980 990
pF1KSD HAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEERREARGLEIHSKLGICWRIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEERREARGLEIHSKLGICWRIPS
1020 1030 1040 1050 1060 1070
1000 1010 1020 1030 1040 1050
pF1KSD LKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPCDREAVAACQVGDPVRLEVRLTNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPCDREAVAACQVGDPVRLEVRLTNR
1080 1090 1100 1110 1120 1130
1060 1070 1080 1090 1100 1110
pF1KSD SPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSSTFYLDAVQPSGQSACLGALLFLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSSTFYLDAVQPSGQSACLGALLFLY
1140 1150 1160 1170 1180 1190
1120 1130 1140
pF1KSD TGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQA
::::::::::::::::::::::::::::::::::::::
XP_011 TGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQA
1200 1210 1220 1230
>>XP_016869383 (OMIM: 611966,613192) PREDICTED: traffick (688 aa)
initn: 4567 init1: 4567 opt: 4567 Z-score: 5199.9 bits: 973.3 E(85289): 0
Smith-Waterman score: 4567; 100.0% identity (100.0% similar) in 688 aa overlap (461-1148:1-688)
440 450 460 470 480 490
pF1KSD LLLETLPGYSLSLDPKDFSRGTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQT
::::::::::::::::::::::::::::::
XP_016 MRLLHELVYASRRMGNPALSVRHLSFLLQT
10 20 30
500 510 520 530 540 550
pF1KSD MLDFLSDQEKKDVAQSLENYTSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLDFLSDQEKKDVAQSLENYTSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPA
40 50 60 70 80 90
560 570 580 590 600 610
pF1KSD SLRPHKMKSLLGQNVSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLRPHKMKSLLGQNVSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMP
100 110 120 130 140 150
620 630 640 650 660 670
pF1KSD FELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVF
160 170 180 190 200 210
680 690 700 710 720 730
pF1KSD SDCLLDNLPGIKTSGSTVEVIPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDCLLDNLPGIKTSGSTVEVIPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGE
220 230 240 250 260 270
740 750 760 770 780 790
pF1KSD SQQLIIKLENIGMEPLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQQLIIKLENIGMEPLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTI
280 290 300 310 320 330
800 810 820 830 840 850
pF1KSD NIKVKLDFSCQENLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NIKVKLDFSCQENLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSH
340 350 360 370 380 390
860 870 880 890 900 910
pF1KSD VKTLEAVLNFKYSGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKTLEAVLNFKYSGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDV
400 410 420 430 440 450
920 930 940 950 960 970
pF1KSD FNSTEHELTVSTRSSEALILHAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FNSTEHELTVSTRSSEALILHAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEER
460 470 480 490 500 510
980 990 1000 1010 1020 1030
pF1KSD REARGLEIHSKLGICWRIPSLKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPCDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REARGLEIHSKLGICWRIPSLKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPCDRE
520 530 540 550 560 570
1040 1050 1060 1070 1080 1090
pF1KSD AVAACQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSSTFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVAACQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSSTFY
580 590 600 610 620 630
1100 1110 1120 1130 1140
pF1KSD LDAVQPSGQSACLGALLFLYTGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDAVQPSGQSACLGALLFLYTGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQA
640 650 660 670 680
>>XP_011515632 (OMIM: 611966,613192) PREDICTED: traffick (631 aa)
initn: 4197 init1: 4197 opt: 4197 Z-score: 4778.8 bits: 895.3 E(85289): 0
Smith-Waterman score: 4197; 100.0% identity (100.0% similar) in 631 aa overlap (518-1148:1-631)
490 500 510 520 530 540
pF1KSD LQTMLDFLSDQEKKDVAQSLENYTSKCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLN
::::::::::::::::::::::::::::::
XP_011 MEPIALPGGLTLPPVPFTKLPIVRHVKLLN
10 20 30
550 560 570 580 590 600
pF1KSD LPASLRPHKMKSLLGQNVSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPASLRPHKMKSLLGQNVSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYN
40 50 60 70 80 90
610 620 630 640 650 660
pF1KSD PMPFELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMPFELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVF
100 110 120 130 140 150
670 680 690 700 710 720
pF1KSD GVFSDCLLDNLPGIKTSGSTVEVIPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVFSDCLLDNLPGIKTSGSTVEVIPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLY
160 170 180 190 200 210
730 740 750 760 770 780
pF1KSD NGESQQLIIKLENIGMEPLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGESQQLIIKLENIGMEPLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVAT
220 230 240 250 260 270
790 800 810 820 830 840
pF1KSD FTINIKVKLDFSCQENLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FTINIKVKLDFSCQENLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGD
280 290 300 310 320 330
850 860 870 880 890 900
pF1KSD YSHVKTLEAVLNFKYSGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YSHVKTLEAVLNFKYSGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLL
340 350 360 370 380 390
910 920 930 940 950 960
pF1KSD LDVFNSTEHELTVSTRSSEALILHAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDVFNSTEHELTVSTRSSEALILHAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLE
400 410 420 430 440 450
970 980 990 1000 1010 1020
pF1KSD EERREARGLEIHSKLGICWRIPSLKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EERREARGLEIHSKLGICWRIPSLKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPC
460 470 480 490 500 510
1030 1040 1050 1060 1070 1080
pF1KSD DREAVAACQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DREAVAACQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSS
520 530 540 550 560 570
1090 1100 1110 1120 1130 1140
pF1KSD TFYLDAVQPSGQSACLGALLFLYTGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TFYLDAVQPSGQSACLGALLFLYTGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQ
580 590 600 610 620 630
pF1KSD A
:
XP_011 A
1148 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:35:48 2016 done: Thu Nov 3 07:35:50 2016
Total Scan time: 16.060 Total Display time: 0.330
Function used was FASTA [36.3.4 Apr, 2011]