Result of FASTA (omim) for
pF1KSDA1896
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1896, 501 aa
1>>>pF1KSDA1896 501 - 501 aa - 501 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9122+/-0.000544; mu= 21.4088+/- 0.034
mean_var=103.1580+/-20.634, 0's: 0 Z-trim(111.0): 266 B-trim: 716 in 2/54
Lambda= 0.126277
statistics sampled from 19186 (19488) to 19186 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.582), E-opt: 0.2 (0.228), width: 16
Scan time: 9.320
The best scores are: opt bits E(85289)
NP_001252543 (OMIM: 608745) calcium-binding mitoch ( 501) 3349 621.6 1.7e-177
XP_006717011 (OMIM: 608745) PREDICTED: calcium-bin ( 481) 2841 529.0 1.2e-149
NP_001317917 (OMIM: 608745) calcium-binding mitoch ( 515) 2834 527.7 3e-149
XP_006717012 (OMIM: 608745) PREDICTED: calcium-bin ( 378) 2502 467.1 4e-131
XP_005251746 (OMIM: 608745) PREDICTED: calcium-bin ( 366) 2275 425.7 1.1e-118
NP_443133 (OMIM: 608745) calcium-binding mitochond ( 469) 2275 425.9 1.3e-118
NP_001006643 (OMIM: 608745) calcium-binding mitoch ( 489) 2275 425.9 1.3e-118
NP_001006642 (OMIM: 608745) calcium-binding mitoch ( 503) 2275 425.9 1.3e-118
NP_077008 (OMIM: 608746) calcium-binding mitochond ( 468) 1758 331.7 2.9e-90
XP_011526577 (OMIM: 608746) PREDICTED: calcium-bin ( 577) 1758 331.8 3.3e-90
NP_037518 (OMIM: 608744) calcium-binding mitochond ( 477) 1636 309.5 1.4e-83
NP_998816 (OMIM: 608744) calcium-binding mitochond ( 458) 1628 308.0 3.8e-83
XP_011526583 (OMIM: 608746) PREDICTED: calcium-bin ( 515) 1610 304.8 4e-82
XP_011526580 (OMIM: 608746) PREDICTED: calcium-bin ( 549) 1610 304.8 4.2e-82
XP_011526579 (OMIM: 608746) PREDICTED: calcium-bin ( 560) 1610 304.8 4.2e-82
XP_011526576 (OMIM: 608746) PREDICTED: calcium-bin ( 624) 1610 304.9 4.5e-82
XP_016882774 (OMIM: 608746) PREDICTED: calcium-bin ( 562) 1603 303.5 1e-81
XP_016882777 (OMIM: 608746) PREDICTED: calcium-bin ( 484) 1473 279.8 1.3e-74
XP_011526586 (OMIM: 608746) PREDICTED: calcium-bin ( 469) 1331 253.9 7.5e-67
XP_011526584 (OMIM: 608746) PREDICTED: calcium-bin ( 503) 1330 253.7 8.9e-67
XP_011526585 (OMIM: 608746) PREDICTED: calcium-bin ( 490) 1325 252.8 1.6e-66
XP_011526582 (OMIM: 608746) PREDICTED: calcium-bin ( 531) 1325 252.9 1.7e-66
XP_016856593 (OMIM: 608744) PREDICTED: calcium-bin ( 271) 1178 225.7 1.3e-58
XP_011526228 (OMIM: 610822) PREDICTED: solute carr ( 306) 1093 210.3 6.5e-54
NP_775908 (OMIM: 610822) solute carrier family 25 ( 370) 1093 210.4 7.3e-54
NP_001308227 (OMIM: 610822) solute carrier family ( 232) 893 173.7 5.1e-43
XP_016882781 (OMIM: 608746) PREDICTED: calcium-bin ( 366) 892 173.8 7.7e-43
XP_016882779 (OMIM: 608746) PREDICTED: calcium-bin ( 412) 892 173.8 8.3e-43
XP_016882775 (OMIM: 608746) PREDICTED: calcium-bin ( 521) 892 174.0 9.6e-43
XP_016882780 (OMIM: 608746) PREDICTED: calcium-bin ( 376) 878 171.2 4.6e-42
XP_016882776 (OMIM: 608746) PREDICTED: calcium-bin ( 485) 878 171.4 5.4e-42
XP_011526587 (OMIM: 608746) PREDICTED: calcium-bin ( 459) 744 146.9 1.2e-34
XP_011526578 (OMIM: 608746) PREDICTED: calcium-bin ( 568) 744 147.0 1.3e-34
XP_016882778 (OMIM: 608746) PREDICTED: calcium-bin ( 423) 682 135.6 2.8e-31
XP_011526581 (OMIM: 608746) PREDICTED: calcium-bin ( 532) 682 135.7 3.2e-31
XP_011526239 (OMIM: 610823) PREDICTED: mitochondri ( 318) 602 120.9 5.6e-27
NP_001308473 (OMIM: 610823) mitochondrial coenzyme ( 318) 602 120.9 5.6e-27
NP_848621 (OMIM: 610823) mitochondrial coenzyme A ( 318) 602 120.9 5.6e-27
XP_005259918 (OMIM: 610823) PREDICTED: mitochondri ( 318) 602 120.9 5.6e-27
XP_016882159 (OMIM: 610823) PREDICTED: mitochondri ( 382) 602 121.0 6.3e-27
NP_001311242 (OMIM: 139080) graves disease carrier ( 281) 462 95.3 2.5e-19
NP_001311241 (OMIM: 139080) graves disease carrier ( 315) 462 95.3 2.7e-19
NP_689920 (OMIM: 139080) graves disease carrier pr ( 332) 462 95.4 2.8e-19
XP_011538513 (OMIM: 139080) PREDICTED: graves dise ( 332) 462 95.4 2.8e-19
NP_660348 (OMIM: 300641) solute carrier family 25 ( 341) 439 91.2 5.1e-18
NP_001269125 (OMIM: 300242) brain mitochondrial ca ( 322) 384 81.2 5.1e-15
NP_001269124 (OMIM: 300242) brain mitochondrial ca ( 325) 384 81.2 5.2e-15
XP_011529704 (OMIM: 300242) PREDICTED: brain mitoc ( 334) 384 81.2 5.2e-15
NP_001269127 (OMIM: 300242) brain mitochondrial ca ( 290) 375 79.5 1.5e-14
XP_016885428 (OMIM: 300242) PREDICTED: brain mitoc ( 338) 362 77.2 8.5e-14
>>NP_001252543 (OMIM: 608745) calcium-binding mitochondr (501 aa)
initn: 3349 init1: 3349 opt: 3349 Z-score: 3307.7 bits: 621.6 E(85289): 1.7e-177
Smith-Waterman score: 3349; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:1-501)
10 20 30 40 50 60
pF1KSD MLQMLWHFLASFFPRAGCHGSREGDDREVRGTPAPAWRDQMASFLGKQDGRAEATEKRPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLQMLWHFLASFFPRAGCHGSREGDDREVRGTPAPAWRDQMASFLGKQDGRAEATEKRPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ILLVVGPAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILLVVGPAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD ENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCARRILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCARRILA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD REGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD TCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHILRTEGAFGLYRGLAPNFMKVIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHILRTEGAFGLYRGLAPNFMKVIP
430 440 450 460 470 480
490 500
pF1KSD AVSISYVVYENLKITLGVQSR
:::::::::::::::::::::
NP_001 AVSISYVVYENLKITLGVQSR
490 500
>>XP_006717011 (OMIM: 608745) PREDICTED: calcium-binding (481 aa)
initn: 2841 init1: 2841 opt: 2841 Z-score: 2807.7 bits: 529.0 E(85289): 1.2e-149
Smith-Waterman score: 2841; 99.3% identity (99.8% similar) in 432 aa overlap (70-501:50-481)
40 50 60 70 80 90
pF1KSD QMASFLGKQDGRAEATEKRPTILLVVGPAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDH
:. .::::::::::::::::::::::::::
XP_006 YFESKGLPAELKSIFKLSVFIPSQEFSTYRQWKQKIVQAGDKDLDGQLDFEEFVHYLQDH
20 30 40 50 60 70
100 110 120 130 140 150
pF1KSD EKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMD
80 90 100 110 120 130
160 170 180 190 200 210
pF1KSD KNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWW
140 150 160 170 180 190
220 230 240 250 260 270
pF1KSD RHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNG
200 210 220 230 240 250
280 290 300 310 320 330
pF1KSD INVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 INVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTR
260 270 280 290 300 310
340 350 360 370 380 390
pF1KSD MALRKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MALRKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQH
320 330 340 350 360 370
400 410 420 430 440 450
pF1KSD YAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHIL
380 390 400 410 420 430
460 470 480 490 500
pF1KSD RTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
::::::::::::::::::::::::::::::::::::::::::
XP_006 RTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
440 450 460 470 480
>>NP_001317917 (OMIM: 608745) calcium-binding mitochondr (515 aa)
initn: 2834 init1: 2834 opt: 2834 Z-score: 2800.5 bits: 527.7 E(85289): 3e-149
Smith-Waterman score: 2834; 99.8% identity (100.0% similar) in 429 aa overlap (73-501:87-515)
50 60 70 80 90 100
pF1KSD SFLGKQDGRAEATEKRPTILLVVGPAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDHEKK
.:::::::::::::::::::::::::::::
NP_001 LDVNRDGGLCVNDLAVGLRRLGLHRTEGELQKIVQAGDKDLDGQLDFEEFVHYLQDHEKK
60 70 80 90 100 110
110 120 130 140 150 160
pF1KSD LRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNG
120 130 140 150 160 170
170 180 190 200 210 220
pF1KSD TMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHL
180 190 200 210 220 230
230 240 250 260 270 280
pF1KSD VAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KSD LKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMAL
300 310 320 330 340 350
350 360 370 380 390 400
pF1KSD RKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAV
360 370 380 390 400 410
410 420 430 440 450 460
pF1KSD NSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHILRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHILRTE
420 430 440 450 460 470
470 480 490 500
pF1KSD GAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
:::::::::::::::::::::::::::::::::::::::
NP_001 GAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
480 490 500 510
>>XP_006717012 (OMIM: 608745) PREDICTED: calcium-binding (378 aa)
initn: 2502 init1: 2502 opt: 2502 Z-score: 2475.1 bits: 467.1 E(85289): 4e-131
Smith-Waterman score: 2502; 100.0% identity (100.0% similar) in 378 aa overlap (124-501:1-378)
100 110 120 130 140 150
pF1KSD HYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWG
::::::::::::::::::::::::::::::
XP_006 MQSLRDLGVKISEQQAEKILKRIRTGHFWG
10 20 30
160 170 180 190 200 210
pF1KSD PVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEER
40 50 60 70 80 90
220 230 240 250 260 270
pF1KSD QTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARS
100 110 120 130 140 150
280 290 300 310 320 330
pF1KSD LWRGNGINVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LWRGNGINVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPM
160 170 180 190 200 210
340 350 360 370 380 390
pF1KSD EVLKTRMALRKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EVLKTRMALRKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLK
220 230 240 250 260 270
400 410 420 430 440 450
pF1KSD NAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSS
280 290 300 310 320 330
460 470 480 490 500
pF1KSD LFKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LFKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
340 350 360 370
>>XP_005251746 (OMIM: 608745) PREDICTED: calcium-binding (366 aa)
initn: 2275 init1: 2275 opt: 2275 Z-score: 2251.8 bits: 425.7 E(85289): 1.1e-118
Smith-Waterman score: 2366; 96.6% identity (96.6% similar) in 378 aa overlap (124-501:1-366)
100 110 120 130 140 150
pF1KSD HYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWG
:::::::::::::::::::::
XP_005 MQSLRDLGVKISEQQAEKILKS--------
10 20
160 170 180 190 200 210
pF1KSD PVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ----MDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEER
30 40 50 60 70
220 230 240 250 260 270
pF1KSD QTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARS
80 90 100 110 120 130
280 290 300 310 320 330
pF1KSD LWRGNGINVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LWRGNGINVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPM
140 150 160 170 180 190
340 350 360 370 380 390
pF1KSD EVLKTRMALRKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVLKTRMALRKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLK
200 210 220 230 240 250
400 410 420 430 440 450
pF1KSD NAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSS
260 270 280 290 300 310
460 470 480 490 500
pF1KSD LFKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LFKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
320 330 340 350 360
>>NP_443133 (OMIM: 608745) calcium-binding mitochondrial (469 aa)
initn: 2275 init1: 2275 opt: 2275 Z-score: 2250.6 bits: 425.9 E(85289): 1.3e-118
Smith-Waterman score: 2705; 96.3% identity (96.8% similar) in 432 aa overlap (70-501:50-469)
40 50 60 70 80 90
pF1KSD QMASFLGKQDGRAEATEKRPTILLVVGPAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDH
:. .::::::::::::::::::::::::::
NP_443 YFESKGLPAELKSIFKLSVFIPSQEFSTYRQWKQKIVQAGDKDLDGQLDFEEFVHYLQDH
20 30 40 50 60 70
100 110 120 130 140 150
pF1KSD EKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMD
::::::::::::::::::::::::::::::::::::::::::::: ::
NP_443 EKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKS------------MD
80 90 100 110 120
160 170 180 190 200 210
pF1KSD KNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 KNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWW
130 140 150 160 170 180
220 230 240 250 260 270
pF1KSD RHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 RHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNG
190 200 210 220 230 240
280 290 300 310 320 330
pF1KSD INVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 INVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTR
250 260 270 280 290 300
340 350 360 370 380 390
pF1KSD MALRKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 MALRKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQH
310 320 330 340 350 360
400 410 420 430 440 450
pF1KSD YAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 YAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHIL
370 380 390 400 410 420
460 470 480 490 500
pF1KSD RTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
::::::::::::::::::::::::::::::::::::::::::
NP_443 RTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
430 440 450 460
>>NP_001006643 (OMIM: 608745) calcium-binding mitochondr (489 aa)
initn: 2275 init1: 2275 opt: 2275 Z-score: 2250.4 bits: 425.9 E(85289): 1.3e-118
Smith-Waterman score: 3213; 97.4% identity (97.4% similar) in 501 aa overlap (1-501:1-489)
10 20 30 40 50 60
pF1KSD MLQMLWHFLASFFPRAGCHGSREGDDREVRGTPAPAWRDQMASFLGKQDGRAEATEKRPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLQMLWHFLASFFPRAGCHGSREGDDREVRGTPAPAWRDQMASFLGKQDGRAEATEKRPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD ILLVVGPAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILLVVGPAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPV
:::::::::::::::::::::::: :::::::::::::::::::::::
NP_001 QEIMQSLRDLGVKISEQQAEKILKS------------MDKNGTMTIDWNEWRDYHLLHPV
130 140 150 160
190 200 210 220 230 240
pF1KSD ENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KSD RLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIK
230 240 250 260 270 280
310 320 330 340 350 360
pF1KSD RLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCARRILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCARRILA
290 300 310 320 330 340
370 380 390 400 410 420
pF1KSD REGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSS
350 360 370 380 390 400
430 440 450 460 470 480
pF1KSD TCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHILRTEGAFGLYRGLAPNFMKVIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHILRTEGAFGLYRGLAPNFMKVIP
410 420 430 440 450 460
490 500
pF1KSD AVSISYVVYENLKITLGVQSR
:::::::::::::::::::::
NP_001 AVSISYVVYENLKITLGVQSR
470 480
>>NP_001006642 (OMIM: 608745) calcium-binding mitochondr (503 aa)
initn: 2275 init1: 2275 opt: 2275 Z-score: 2250.3 bits: 425.9 E(85289): 1.3e-118
Smith-Waterman score: 2698; 96.7% identity (97.0% similar) in 429 aa overlap (73-501:87-503)
50 60 70 80 90 100
pF1KSD SFLGKQDGRAEATEKRPTILLVVGPAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDHEKK
.:::::::::::::::::::::::::::::
NP_001 LDVNRDGGLCVNDLAVGLRRLGLHRTEGELQKIVQAGDKDLDGQLDFEEFVHYLQDHEKK
60 70 80 90 100 110
110 120 130 140 150 160
pF1KSD LRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNG
:::::::::::::::::::::::::::::::::::::::::: :::::
NP_001 LRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKS------------MDKNG
120 130 140 150 160
170 180 190 200 210 220
pF1KSD TMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHL
170 180 190 200 210 220
230 240 250 260 270 280
pF1KSD VAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINV
230 240 250 260 270 280
290 300 310 320 330 340
pF1KSD LKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMAL
290 300 310 320 330 340
350 360 370 380 390 400
pF1KSD RKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAV
350 360 370 380 390 400
410 420 430 440 450 460
pF1KSD NSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHILRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHILRTE
410 420 430 440 450 460
470 480 490 500
pF1KSD GAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
:::::::::::::::::::::::::::::::::::::::
NP_001 GAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR
470 480 490 500
>>NP_077008 (OMIM: 608746) calcium-binding mitochondrial (468 aa)
initn: 1829 init1: 1758 opt: 1758 Z-score: 1741.6 bits: 331.7 E(85289): 2.9e-90
Smith-Waterman score: 2017; 64.2% identity (84.0% similar) in 480 aa overlap (29-501:1-468)
10 20 30 40 50
pF1KSD MLQMLWHFLASFFPRAGCHGSREGDDREVRGTPAPAWRDQMASFL-----GKQDGRAEAT
.::.:. : : : . : ...:::...
NP_077 MRGSPGDAERRQRWGRLFEELDSNKDGRVDVH
10 20 30
60 70 80 90 100 110
pF1KSD EKRPTILLVVG--PAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKK
: : . . : : . : . :: : :: ::.::: .:::..:..: :.:.:::..
NP_077 ELRQGLARLGGGNPDPGAQQGISSEGDADPDGGLDLEEFSRYLQEREQRLLLMFHSLDRN
40 50 60 70 80 90
120 130 140 150 160 170
pF1KSD NDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRD
.::.::..::.::.: ::..:: .::::::. ::..:::::::.::::
NP_077 QDGHIDVSEIQQSFRALGISISLEQAEKILHS------------MDRDGTMTIDWQEWRD
100 110 120 130 140
180 190 200 210 220 230
pF1KSD YHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSR
. ::: .::. ... .:::::..:.:: :::::::. .:. :::::..::::. ::::::
NP_077 HFLLHSLENVEDVLYFWKHSTVLDIGECLTVPDEFSKQEKLTGMWWKQLVAGAVAGAVSR
150 160 170 180 190 200
240 250 260 270 280 290
pF1KSD TCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKF
: :::::::::.::::::..: ..:.::. .:. ::: ::::::::::::::::::::::
NP_077 TGTAPLDRLKVFMQVHASKTNRLNILGGLRSMVLEGGIRSLWRGNGINVLKIAPESAIKF
210 220 230 240 250 260
300 310 320 330 340 350
pF1KSD MAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLD
:::::::: . ..::::...::.:::::::: ::. ::::::::::..::.::::.:.::
NP_077 MAYEQIKRAILGQQETLHVQERFVAGSLAGATAQTIIYPMEVLKTRLTLRRTGQYKGLLD
270 280 290 300 310 320
360 370 380 390 400 410
pF1KSD CARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAVNSADPGVFVLL
:::::: ::: :::.::.::.::::::::::::::::::: :::.:. .:::::..:::
NP_077 CARRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNWWLQQYSHDSADPGILVLL
330 340 350 360 370 380
420 430 440 450 460 470
pF1KSD ACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHILRTEGAFGLYRGLAP
::::.::::::.::::::::::::::::::::.:...: .:..::: :: :::::.::
NP_077 ACGTISSTCGQIASYPLALVRTRMQAQASIEGGPQLSMLGLLRHILSQEGMRGLYRGIAP
390 400 410 420 430 440
480 490 500
pF1KSD NFMKVIPAVSISYVVYENLKITLGVQSR
::::::::::::::::::.: .::: ::
NP_077 NFMKVIPAVSISYVVYENMKQALGVTSR
450 460
>>XP_011526577 (OMIM: 608746) PREDICTED: calcium-binding (577 aa)
initn: 1829 init1: 1758 opt: 1758 Z-score: 1740.6 bits: 331.8 E(85289): 3.3e-90
Smith-Waterman score: 2017; 64.2% identity (84.0% similar) in 480 aa overlap (29-501:1-468)
10 20 30 40 50
pF1KSD MLQMLWHFLASFFPRAGCHGSREGDDREVRGTPAPAWRDQMASFL-----GKQDGRAEAT
.::.:. : : : . : ...:::...
XP_011 MRGSPGDAERRQRWGRLFEELDSNKDGRVDVH
10 20 30
60 70 80 90 100 110
pF1KSD EKRPTILLVVG--PAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKK
: : . . : : . : . :: : :: ::.::: .:::..:..: :.:.:::..
XP_011 ELRQGLARLGGGNPDPGAQQGISSEGDADPDGGLDLEEFSRYLQEREQRLLLMFHSLDRN
40 50 60 70 80 90
120 130 140 150 160 170
pF1KSD NDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRD
.::.::..::.::.: ::..:: .::::::. ::..:::::::.::::
XP_011 QDGHIDVSEIQQSFRALGISISLEQAEKILHS------------MDRDGTMTIDWQEWRD
100 110 120 130 140
180 190 200 210 220 230
pF1KSD YHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSR
. ::: .::. ... .:::::..:.:: :::::::. .:. :::::..::::. ::::::
XP_011 HFLLHSLENVEDVLYFWKHSTVLDIGECLTVPDEFSKQEKLTGMWWKQLVAGAVAGAVSR
150 160 170 180 190 200
240 250 260 270 280 290
pF1KSD TCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKF
: :::::::::.::::::..: ..:.::. .:. ::: ::::::::::::::::::::::
XP_011 TGTAPLDRLKVFMQVHASKTNRLNILGGLRSMVLEGGIRSLWRGNGINVLKIAPESAIKF
210 220 230 240 250 260
300 310 320 330 340 350
pF1KSD MAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLD
:::::::: . ..::::...::.:::::::: ::. ::::::::::..::.::::.:.::
XP_011 MAYEQIKRAILGQQETLHVQERFVAGSLAGATAQTIIYPMEVLKTRLTLRRTGQYKGLLD
270 280 290 300 310 320
360 370 380 390 400 410
pF1KSD CARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAVNSADPGVFVLL
:::::: ::: :::.::.::.::::::::::::::::::: :::.:. .:::::..:::
XP_011 CARRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNWWLQQYSHDSADPGILVLL
330 340 350 360 370 380
420 430 440 450 460 470
pF1KSD ACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKHILRTEGAFGLYRGLAP
::::.::::::.::::::::::::::::::::.:...: .:..::: :: :::::.::
XP_011 ACGTISSTCGQIASYPLALVRTRMQAQASIEGGPQLSMLGLLRHILSQEGMRGLYRGIAP
390 400 410 420 430 440
480 490 500
pF1KSD NFMKVIPAVSISYVVYENLKITLGVQSR
::::::::::::::::::.: .::: ::
XP_011 NFMKVIPAVSISYVVYENMKQALGVTSRLEYSGSISDHCNLCLPGSSDSPASASRVAGIT
450 460 470 480 490 500
501 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:39:13 2016 done: Thu Nov 3 07:39:15 2016
Total Scan time: 9.320 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]